Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002962A_C01 KCC002962A_c01
(463 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_221124.1| similar to ring finger B-box coiled-coil protei... 33 1.2
pir||T08179 LRG5 protein - Chlamydomonas reinhardtii gi|1644370|... 33 1.2
ref|ZP_00013634.1| COG2822: Predicted periplasmic lipoprotein in... 33 1.2
ref|NP_258411.1| gene overexpressed in astrocytoma [Homo sapiens... 33 2.0
ref|XP_304941.1| hypothetical protein XP_304941 [Homo sapiens] 33 2.0
>ref|XP_221124.1| similar to ring finger B-box coiled-coil protein, GOA - human
[Rattus norvegicus]
Length = 642
Score = 33.5 bits (75), Expect = 1.2
Identities = 24/89 (26%), Positives = 35/89 (38%), Gaps = 9/89 (10%)
Frame = -3
Query: 305 APHPPNAGPKQFGKRACGKGRAWQRAHGCLDAPASAADARKPQHPSSQATSS-------- 150
AP P AG + AC +G A A CL AS A H S A
Sbjct: 120 APEPWPAGEEPVRCDACPEGAALPAALSCLSCLASFCSAHLAPHERSPALRGHRLVPPLR 179
Query: 149 -VVQNICEYQLNTPQRHLRITRDIVSDVC 66
+ +++C L +R+ R+ R + + C
Sbjct: 180 RLEESLCPRHLRPLERYCRVERVCLCEAC 208
>pir||T08179 LRG5 protein - Chlamydomonas reinhardtii gi|1644370|gb|AAB17561.1|
LRG5 [Chlamydomonas reinhardtii]
gi|1763289|gb|AAB39840.1| LRG5 [Chlamydomonas
reinhardtii]
Length = 640
Score = 33.5 bits (75), Expect = 1.2
Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Frame = +1
Query: 55 CAAIHTSETMSRVIRRWRCGVLS*YSHMFCTTELVAWELGCCGLRASAADAGASRQPCAR 234
CA + T SR +RRWRCG + + W GC G R R+ C R
Sbjct: 520 CACLPTP-CCSRWLRRWRCGWAP--GGRWRCSLCSCWRWGCSG-RTPLLPTWVWRRRCCR 575
Query: 235 CHARPLPQARLPNC--FGPALGGCGAPSIWQNSCA 333
C +R P C L GC W CA
Sbjct: 576 C----CRGSRAPRCNWVCCCLPGCCCWGCWARPCA 606
>ref|ZP_00013634.1| COG2822: Predicted periplasmic lipoprotein involved in iron
transport [Rhodospirillum rubrum]
Length = 470
Score = 33.5 bits (75), Expect = 1.2
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 15/80 (18%)
Frame = -3
Query: 296 PPNAGPKQFGKRACGKGRAWQRAHGCLDAPASAADARK--------------PQHPSSQA 159
PP AG + + A G RAW RA G L P D R PQ PS+ A
Sbjct: 4 PPGAGLRSI-RHATGLERAWHRAFGRLQLPGRPGDRRSDRLWPLSPDHADRVPQAPSAGA 62
Query: 158 TSSVVQNICE-YQLNTPQRH 102
+ + E +++PQ+H
Sbjct: 63 PAPRRARLVERMTMSSPQQH 82
>ref|NP_258411.1| gene overexpressed in astrocytoma [Homo sapiens]
gi|15741221|gb|AAK07687.1| gene overexpressed in
astrocytoma [Homo sapiens]
Length = 638
Score = 32.7 bits (73), Expect = 2.0
Identities = 25/91 (27%), Positives = 35/91 (37%), Gaps = 9/91 (9%)
Frame = -3
Query: 305 APHPPNAGPKQFGKRACGKGRAWQRAHGCLDAPASAADARKPQHPSSQATSS-------- 150
AP P AG + AC +G A A CL AS A H S A
Sbjct: 116 APEPWPAGEEPVRCDACPEGAALPAALSCLSCLASFCPAHLGPHERSPALRGHRLVPPLR 175
Query: 149 -VVQNICEYQLNTPQRHLRITRDIVSDVCIA 60
+ +++C L +R+ R R + + C A
Sbjct: 176 RLEESLCPRHLRPXERYCRAERVCLCEACAA 206
>ref|XP_304941.1| hypothetical protein XP_304941 [Homo sapiens]
Length = 233
Score = 32.7 bits (73), Expect = 2.0
Identities = 22/73 (30%), Positives = 30/73 (40%), Gaps = 2/73 (2%)
Frame = +1
Query: 67 HTSETMSRVIRRWRCGVLS*YSHMFCTTELVAWELGCCGLRASAADAGA--SRQPCARCH 240
HTS +++ + W L H + TT+ V L R S + G RQ C CH
Sbjct: 120 HTSHALTKTGKYWP---LRKQEHSYPTTQAVGQPLFSWPSRVSGGENGGLKGRQKCLMCH 176
Query: 241 ARPLPQARLPNCF 279
+ LPN F
Sbjct: 177 LENTTKNELPNNF 189
