KCC002949A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002949A_C01 KCC002949A_c01
taaGCTTACGCGGCCCAGCTTAAAAGCTCCCTAAGCGAACTCCCGAACAAGAATGTCGCA
GCGCTACAACGGTGGCTATGGCCAGGCGCCTTACCAGACCTACGGTCGTGACGCTCCCCC
CGAGCAGGCTGGCTGGAACTACACCGGCCACAACTCCAACTCGCGCGTGGCCTTCTACGA
GAACCCCCAGGGCGTGAAGATGGACTACTACTACACCACCGGCACTGTGAAGACGTCCAT
GGAGCACCCCAGCCGCGGCTCCACGCAGCTGTTCCGCCGCGACCTGAGCGACAGCCAGTA
CAACGCCGTGCTGGACAACCCGCGCACACACACCGGCCAGGGGTACTACCGCAAGTAGGG
GCGCGGGGTGCGGCGACGCGGTGGTGCGGTGCGGTGACCATGGCCGCGCAGGAGCACTAC
GAGGGCCAGGGGTGGGGAGGGCTTGCATGGGCTGTTGAGGCCGACGAGATAAGGATAACG
CCACGTCCAGTTCCGTGTAGCAGCTGTTACGGCGTGCATAACACATGCATTATGATG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002949A_C01 KCC002949A_c01
         (537 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q05049|MUC1_XENLA Integumentary mucin C.1 (FIM-C.1) gi|539486...    50  2e-05
pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [...    49  4e-05
gb|EAA20333.1| hypothetical protein [Plasmodium yoelii yoelii]         48  7e-05
ref|NP_012685.1| Delayed Anaerobic Gene; Dan4p [Saccharomyces ce...    47  1e-04
gb|AAK61478.1| glycoprotein gp2 [Equine herpesvirus 1]                 47  2e-04

>sp|Q05049|MUC1_XENLA Integumentary mucin C.1 (FIM-C.1) gi|539486|pir||A45155 mucin
           FIM-C.1 - African clawed frog (fragment)
           gi|951460|gb|AAA74725.1| FIM-C.1 gene product
          Length = 662

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 42/149 (28%), Positives = 52/149 (34%), Gaps = 13/149 (8%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPAT-----TPTRAWPSTRTPRA*RW 203
           TP       TT       T PT  T  P+    TT  T     TPT   P+T T +A   
Sbjct: 406 TPTTTTTPTTTTTTKATTTTPTTTTTTPTTTTTTTTTTKATTTTPTTTTPTTTTTKA--- 462

Query: 204 TTTTPPAL*RRPWSTPAAAPRSCSAAT*AT--------ASTTPCWTTRAHTPARGTTASR 359
           TTTTP      P +T   A  +    T  T         +TTP  TT   T  + TT + 
Sbjct: 463 TTTTPTTTTTTPTTTTTKATTTTPTTTTTTPTTTTTKATTTTPTTTTTTTTTTKATTTTT 522

Query: 360 GAGCGDAVVRCGDHGRAGALRGPGVGRAC 446
              C     +  D G  G        + C
Sbjct: 523 SGECKMEPSKRADCGYPGITESQCRSKGC 551

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPS----RLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL 227
           S + VA  +  T PT  T P +    +   TTP TT T    +T T    + TTTTP   
Sbjct: 394 STSQVAATKTTTTPTTTTTPTTTTTTKATTTTPTTTTTTPTTTTTTTTTTKATTTTPTT- 452

Query: 228 *RRPWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTAS 356
                +TP       +  T  T +TTP  TT   T    TT +
Sbjct: 453 -----TTPTTTTTKATTTTPTTTTTTPTTTTTKATTTTPTTTT 490

 Score = 41.2 bits (95), Expect = 0.009
 Identities = 36/119 (30%), Positives = 51/119 (42%)
 Frame = +3

Query: 57  RSATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RR 236
           ++ TT+ +A   T PT  T   +    T   TT T+A P+T T      TTTTP      
Sbjct: 218 KAPTTIQIATTTTTPTTTT---TTTKATPTTTTTTKATPTTTTTTKATTTTTTP------ 268

Query: 237 PWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTASRGAGCGDAVVRCGDHGRAG 413
             +T     ++ +  T  T +TTP  TT   T A  TT +    C     +  D G +G
Sbjct: 269 --TTTTTTTKATTTPT-TTTTTTPTTTT---TKATTTTTTTSGECKMEPSKREDCGYSG 321

 Score = 35.8 bits (81), Expect = 0.37
 Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
 Frame = +3

Query: 99  PTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRPWSTPAA--APRSC 272
           PT  T P +  AG  P T    A P+T    A    T   PA    P  T AA  AP + 
Sbjct: 68  PTTTTAPATTAAGKAPTTAAATA-PTTAAAGAPTTATGKAPATAAAPVPTTAASKAPTTA 126

Query: 273 SAAT*ATASTTPCWT--TRAHTPARGTTAS 356
           +AAT +TA+     T  + A +  R T++S
Sbjct: 127 AAATHSTAAAAAPTTAASAAKSKERSTSSS 156

 Score = 32.7 bits (73), Expect = 3.1
 Identities = 21/64 (32%), Positives = 25/64 (38%)
 Frame = +3

Query: 24  KLPKRTPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RW 203
           K    TP     + TT       T PT  T  P+        TTPT    +T T +A   
Sbjct: 461 KATTTTPTTTTTTPTTTTTKATTTTPTTTTTTPTTTTTKATTTTPTTTTTTTTTTKA--- 517

Query: 204 TTTT 215
           TTTT
Sbjct: 518 TTTT 521

 Score = 32.3 bits (72), Expect = 4.0
 Identities = 22/62 (35%), Positives = 26/62 (41%)
 Frame = +3

Query: 30  PKRTPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTT 209
           P  T   +    TT       T  T  T   +  A TTP TT T   P+T T +A   TT
Sbjct: 243 PTTTTTTKATPTTTTTTKATTTTTTPTTTTTTTKATTTPTTTTTTT-PTTTTTKATTTTT 301

Query: 210 TT 215
           TT
Sbjct: 302 TT 303

>pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [imported] -
           Boreogadus saida gi|2078483|gb|AAC60129.1| antifreeze
           glycopeptide AFGP polyprotein precursor
          Length = 507

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 49/144 (34%), Positives = 58/144 (40%), Gaps = 30/144 (20%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLPPSRLAGT-----------TPATTPTRAWPSTR- 182
           TP +  R+AT    A   T  T  T   +  A T           TPAT  T A  +T  
Sbjct: 331 TPARAARAATPATAATPATAATAATAATAATAATAATPARAARAATPATAATAATAATAA 390

Query: 183 ------TP-RA*RWTTTTPPAL*RRPWSTPAAAPRSCSAAT*ATAST-----------TP 308
                 TP RA R  T   PA    P +TPA A  + +AAT ATA+T           TP
Sbjct: 391 TAATAATPARAARAATPATPATPATP-ATPATAATAATAATAATAATAATAATAATAPTP 449

Query: 309 CWTTRAHTPARGTTASRGAGCGDA 380
               RA TPA G T +     G A
Sbjct: 450 ARAARAATPATGATPATAPTAGTA 473

 Score = 48.1 bits (113), Expect = 7e-05
 Identities = 40/114 (35%), Positives = 49/114 (42%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTP 218
           TP +  R+AT    A   T  T  T P +     T AT  T A P+     A   T  TP
Sbjct: 253 TPARAARAATPATAATLATAATPAT-PATPATAATDATAATAATPARAATPATPATAATP 311

Query: 219 PAL*RRPWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTASRGAGCGDA 380
                   +TPA A  + +AAT ATA+ TP    RA TPA   T +  A    A
Sbjct: 312 --------ATPATAATAATAATAATAA-TPARAARAATPATAATPATAATAATA 356

 Score = 45.4 bits (106), Expect = 5e-04
 Identities = 45/116 (38%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
 Frame = +3

Query: 63  ATTVAMARRLTRPTVVTLPPSRLAG-TTPATTPTRAWPSTRTPRA*RWT--TTTPPAL*R 233
           AT    A   T  T  T  P+R A   TPAT  T A P+T    A   T  T   PA   
Sbjct: 279 ATPATAATDATAATAAT--PARAATPATPATAATPATPATAATAATAATAATAATPARAA 336

Query: 234 R-----PWSTPAAAPRSCSAAT*ATAST--TPCWTTRAHTPARGTTASRGAGCGDA 380
           R       +TPA A  + +AAT ATA+T  TP    RA TPA   TA+  A    A
Sbjct: 337 RAATPATAATPATAATAATAATAATAATAATPARAARAATPATAATAATAATAATA 392

 Score = 45.1 bits (105), Expect = 6e-04
 Identities = 46/122 (37%), Positives = 54/122 (43%), Gaps = 13/122 (10%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLPPSRLA-GTTPATTPTRAWPSTRTPRA*RWTTTT 215
           TP     +ATT A A   T  T  T  P+R A   TPAT  T A  +T    A   T  T
Sbjct: 72  TPATAATAATTAATAA--TAATAAT--PARAARAATPATAATPATAATAATAATAATAET 127

Query: 216 P-----PAL*RRPWS--TPAAAPRSCSAAT*ATAST-----TPCWTTRAHTPARGTTASR 359
           P     PA    P +  TPA A  + +AAT ATA+T     TP       TPA    A+R
Sbjct: 128 PARAATPATAATPATAATPATAATAATAATSATAATAARAATPATAATPATPATAARAAR 187

Query: 360 GA 365
            A
Sbjct: 188 AA 189

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 51/158 (32%), Positives = 58/158 (36%), Gaps = 15/158 (9%)
 Frame = +3

Query: 15  PA*KLPKRTPEQECRSATTVAMARRLTRPTVVTLP-PSRLA-GTTPATTPTRAWPSTRTP 188
           PA      TP      AT    A   T  T  T   P+R A   TPAT  T A  +T   
Sbjct: 296 PARAATPATPATAATPATPATAATAATAATAATAATPARAARAATPATAATPATAATAAT 355

Query: 189 RA*RWTTTTP--PAL*RRPWSTPAAAPRSCSAAT*ATAST-----------TPCWTTRAH 329
            A   T  T   PA   R  +TPA A  + +AAT ATA+T           TP       
Sbjct: 356 AATAATAATAATPARAARA-ATPATAATAATAATAATAATAATPARAARAATPATPATPA 414

Query: 330 TPARGTTASRGAGCGDAVVRCGDHGRAGALRGPGVGRA 443
           TPA   TA+  A    A         A A   P   RA
Sbjct: 415 TPATPATAATAATAATAATAATAATAATAATAPTPARA 452

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 44/125 (35%), Positives = 53/125 (42%), Gaps = 16/125 (12%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLP-------PSRLAGTTPATTP-TRAWPSTRTPRA 194
           TP +  R+AT    A   T  T  T         P+R A    A TP T A P+T    A
Sbjct: 94  TPARAARAATPATAATPATAATAATAATAATAETPARAATPATAATPATAATPATAATAA 153

Query: 195 *RWTTTTP--------PAL*RRPWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTT 350
              T+ T         PA    P +TPA A R+  AAT ATA+T     T A T A   T
Sbjct: 154 TAATSATAATAARAATPATAATP-ATPATAARAARAATPATAATAATAATAA-TAATAAT 211

Query: 351 ASRGA 365
           A+  A
Sbjct: 212 AATAA 216

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 42/125 (33%), Positives = 52/125 (41%)
 Frame = +3

Query: 6   LRGPA*KLPKRTPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRT 185
           L GP+     R  + +   A   A AR  T  T  T  P+  A  TPAT  T A  +T  
Sbjct: 7   LLGPSCTSSPRYEQHQLLVARPAAAARAATPATAAT--PATAA--TPATAATAATEATAA 62

Query: 186 PRA*RWTTTTPPAL*RRPWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTASRGA 365
                  T   PA    P +   AA  + +AAT ATA+T P    RA TPA   T +  A
Sbjct: 63  -------TAATPATAATPATAATAATTAATAATAATAAT-PARAARAATPATAATPATAA 114

Query: 366 GCGDA 380
               A
Sbjct: 115 TAATA 119

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 39/113 (34%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLPPSRLAG--TTPATTPTRAWPSTRTPRA*RWTTT 212
           TP      AT    A   T  T  T   +  A    TPAT  T A P+T    A   T  
Sbjct: 133 TPATAATPATAATPATAATAATAATSATAATAARAATPATAATPATPATAARAARAATPA 192

Query: 213 TPPAL*RRPWSTPAAAPRSCSAAT*ATAST--TPCWTTRAHTPARGTTASRGA 365
           T         +T A A  + +AAT ATA+T  TP    RA TPA   T +  A
Sbjct: 193 TA--------ATAATAATAATAATAATAATAATPARAARAATPATAPTPATAA 237

 Score = 42.4 bits (98), Expect = 0.004
 Identities = 44/125 (35%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLP-PSRLA-GTTPATTPT---RAWPSTRTPRA*RW 203
           TP     +AT    A   T  T  T   P+R A   TPAT PT    A P+T    A   
Sbjct: 190 TPATAATAATAATAATAATAATAATAATPARAARAATPATAPTPATAATPATAATAATAP 249

Query: 204 TTTTPPAL*RRPWSTPAAAPRSCSAAT*ATAST-----------TPCWTTRAHTPARGTT 350
           T  TP    R   +TPA A    +AAT AT +T           T     RA TPA   T
Sbjct: 250 TAATPARAARA--ATPATAATLATAATPATPATPATAATDATAATAATPARAATPATPAT 307

Query: 351 ASRGA 365
           A+  A
Sbjct: 308 AATPA 312

 Score = 42.0 bits (97), Expect = 0.005
 Identities = 36/110 (32%), Positives = 44/110 (39%), Gaps = 8/110 (7%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRP 239
           +A T A A R   P     P +     T AT  T A  +T    A   T  T P      
Sbjct: 394 TAATPARAARAATPATPATPATPATPATAATAATAATAATAATAATAATAATAP------ 447

Query: 240 WSTPAAAPRSCSAAT*ATASTTPCWTT--------RAHTPARGTTASRGA 365
             TPA A R+ + AT AT +T P   T         A TPAR +T +  A
Sbjct: 448 --TPARAARAATPATGATPATAPTAGTAATAATAATAATPARASTPATAA 495

 Score = 40.0 bits (92), Expect = 0.019
 Identities = 38/116 (32%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAW-PSTRTPRA*RWTTTTPPAL*RR 236
           +A T A A R   P      P+     TPAT  T A  P+  TP       T   A    
Sbjct: 214 TAATPARAARAATPATA---PTPATAATPATAATAATAPTAATPARAARAATPATAATLA 270

Query: 237 PWSTPAAAPRSCSAAT*ATAST--------TPCWTTRAHTPARGTTASRGAGCGDA 380
             +TPA      +AAT ATA+T        TP     A TPA   TA+  A    A
Sbjct: 271 TAATPATPATPATAATDATAATAATPARAATPATPATAATPATPATAATAATAATA 326

 Score = 37.7 bits (86), Expect = 0.096
 Identities = 40/121 (33%), Positives = 46/121 (37%), Gaps = 12/121 (9%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPATTP---TRAWPSTRTPRA*RWTT 209
           TP     +AT    A   T  T  T   +  A TT AT     T A P+     A   T 
Sbjct: 48  TPATAATAATEATAATAATPATAATPATAATAATTAATAATAATAATPARAARAATPATA 107

Query: 210 TTP-------PAL*RRPWSTPAAAPRSCSAAT*ATAST--TPCWTTRAHTPARGTTASRG 362
            TP        A       TPA A    +AAT ATA+T  T      A T A   TA+R 
Sbjct: 108 ATPATAATAATAATAATAETPARAATPATAATPATAATPATAATAATAATSATAATAARA 167

Query: 363 A 365
           A
Sbjct: 168 A 168

 Score = 37.7 bits (86), Expect = 0.096
 Identities = 36/117 (30%), Positives = 42/117 (35%)
 Frame = +3

Query: 15  PA*KLPKRTPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA 194
           PA      T      +AT    A   T  T  T      A T   T  T A  +T    A
Sbjct: 37  PATAATPATAATPATAATAATEATAATAATPATAATPATAATAATTAATAATAATAATPA 96

Query: 195 *RWTTTTPPAL*RRPWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTASRGA 365
                 TP        +TPA A  + +AAT ATA T      RA TPA   T +  A
Sbjct: 97  RAARAATPATA-----ATPATAATAATAATAATAET----PARAATPATAATPATAA 144

 Score = 36.6 bits (83), Expect = 0.21
 Identities = 37/122 (30%), Positives = 45/122 (36%), Gaps = 13/122 (10%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLPPSRLAGT--TPATTPTRAWPSTRTPRA*RWTTT 212
           TP +  R+AT        T  T  T   +  A T  TPA     A P+T    A   T  
Sbjct: 217 TPARAARAATPATAPTPATAATPATAATAATAPTAATPARAARAATPATAATLATAATPA 276

Query: 213 TPPAL*RRPWSTPAAAPRSCSAAT*AT-----------ASTTPCWTTRAHTPARGTTASR 359
           TP        +TPA A    +AAT AT            + TP     A T A   TA+ 
Sbjct: 277 TP--------ATPATAATDATAATAATPARAATPATPATAATPATPATAATAATAATAAT 328

Query: 360 GA 365
            A
Sbjct: 329 AA 330

 Score = 32.7 bits (73), Expect = 3.1
 Identities = 33/100 (33%), Positives = 37/100 (37%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTP 218
           TP      AT    A   T  T  T   +  A T P  TP RA     TP       T P
Sbjct: 412 TPATPATPATAATAATAATAATAATAATAATAATAP--TPARA-ARAATPATGATPATAP 468

Query: 219 PAL*RRPWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPA 338
            A      +T A A     A+T ATA+T       A TPA
Sbjct: 469 TAGTAATAATAATAATPARASTPATAAT----PVTAATPA 504

>gb|EAA20333.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 422

 Score = 48.1 bits (113), Expect = 7e-05
 Identities = 48/137 (35%), Positives = 54/137 (39%), Gaps = 6/137 (4%)
 Frame = -2

Query: 461 ASTAHASPPHPWPS*CSCAAMVTAPHHRVAAPRAPTCGSTP---GRCVCAGCPARRCTGC 291
           A T HA P H W             HHR A P      S P   G     GCPA R T  
Sbjct: 64  AGTQHAGPCHLWQG----------RHHRTAPPPLRIQQSLPQDAGSGGPGGCPANRWT-- 111

Query: 290 RSGRGGTAAWSRGWGAPWTSSQCRW-CSSSPSSRPGGSRRRPRASWSCGRCSSSQPARG- 117
                  AAWSR W  P  S++  W  SS PSS P     R  A+  C   SS+ P R  
Sbjct: 112 -------AAWSRWWKFP--STRGSWPASSIPSSPP-----RRAAAIRCSAASSAPPVRAA 157

Query: 116 -ERHDRRSGKAPGHSHR 69
             RH   + + P H  R
Sbjct: 158 KARHPPXAVE-PNHXQR 173

>ref|NP_012685.1| Delayed Anaerobic Gene; Dan4p [Saccharomyces cerevisiae]
           gi|1352944|sp|P47179|DAN4_YEAST Cell wall protein DAN4
           precursor gi|1078284|pir||S57180 probable membrane
           protein YJR151c - yeast (Saccharomyces cerevisiae)
           gi|1015903|emb|CAA89684.1| unnamed protein product
           [Saccharomyces cerevisiae]
          Length = 1161

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
 Frame = +3

Query: 66  TTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTP---PAL*RR 236
           TT   +   T  T  T P +    TTP T+ T   P+T T      T+TTP         
Sbjct: 181 TTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTPTTSTTSTTS 240

Query: 237 PWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTAS 356
             ST +  P + S +T  T STTP  +T +  P   TT++
Sbjct: 241 QTSTKSTTPTTSSTSTTPTTSTTPTTSTTSTAPTTSTTST 280

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 29/99 (29%), Positives = 43/99 (43%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRP 239
           ++TT   +   T PT      +    TTP T+ T   P+T T      T+TT        
Sbjct: 125 TSTTTTKSSTSTTPTTTITSTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTST 184

Query: 240 WSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTAS 356
            ST      + +  T +T STTP  +T + TP   TT++
Sbjct: 185 TSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTST 223

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
 Frame = +3

Query: 27  LPKRTPEQECRSATTVAMARRLTRPTVVT--LPPSRLAGTTPATTPTRAWPSTRTPRA*R 200
           +P  T     +S+T+      +T  T  T   P +    TTP T+ T   P+T T     
Sbjct: 121 IPTSTSTTTTKSSTSTTPTTTITSTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTP 180

Query: 201 WTTTTPPAL*RRPWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTT 350
            T+TT         ST      + +  T +T STTP  +T + TP   TT
Sbjct: 181 TTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTT 230

 Score = 44.7 bits (104), Expect = 8e-04
 Identities = 31/97 (31%), Positives = 43/97 (43%)
 Frame = +3

Query: 66  TTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRPWS 245
           TT   +   T  T  T P +    TTP T+ T   P+T T      T+TTP        S
Sbjct: 154 TTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTST------TSTTPTT------S 201

Query: 246 TPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTAS 356
           T +  P + + +T  T STT    T + TP   TT++
Sbjct: 202 TTSTTPTTSTTSTTPTTSTTSTTPTTSTTPTTSTTST 238

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 30/97 (30%), Positives = 45/97 (45%)
 Frame = +3

Query: 66  TTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRPWS 245
           TT   +   T  T  T P +    TTP T+ T   P+T T      T+TTP        S
Sbjct: 172 TTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTST------TSTTPTT------S 219

Query: 246 TPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTAS 356
           T +  P + +  T +T STT   +T++ TP   +T++
Sbjct: 220 TTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTTSSTST 256

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 29/98 (29%), Positives = 41/98 (41%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRP 239
           ++TT   +   T  T  T P +    TTP T+ T   P+T T      T+TT        
Sbjct: 143 TSTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTST 202

Query: 240 WSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTA 353
            ST      + +  T +T STTP  +T   T    TT+
Sbjct: 203 TSTTPTTSTTSTTPTTSTTSTTPTTSTTPTTSTTSTTS 240

 Score = 38.9 bits (89), Expect = 0.043
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPSRLAGTTP--ATTPTRAWPSTRTPRA*RWTTTTPPAL*R 233
           ++TT   +   T PT  T   +    TTP  +TT T +  ST++      +T+T P    
Sbjct: 203 TSTTPTTSTTSTTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTTSSTSTTPTTST 262

Query: 234 RP-WSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTASRGA 365
            P  ST + AP + + +T +T ST     T + T +  +T+S  A
Sbjct: 263 TPTTSTTSTAPTTSTTSTTSTTSTISTAPTTSTTSSTFSTSSASA 307

 Score = 37.0 bits (84), Expect = 0.16
 Identities = 29/100 (29%), Positives = 42/100 (42%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTP 218
           T  Q    +TT   +   T PT  T P +    T P T+ T    +T T      T+TT 
Sbjct: 238 TTSQTSTKSTTPTTSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTISTAPTTSTTS 297

Query: 219 PAL*RRPWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPA 338
                  +ST +A+  S  + T  T++T    TT A + A
Sbjct: 298 ST-----FSTSSASASSVISTTATTSTTFASLTTPATSTA 332

 Score = 36.2 bits (82), Expect = 0.28
 Identities = 28/95 (29%), Positives = 40/95 (41%)
 Frame = +3

Query: 66  TTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRPWS 245
           TT   +   T  T  T P +    TTP T+ T   P+T T      T+TTP         
Sbjct: 163 TTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTST------TSTTPTTSTTSTTP 216

Query: 246 TPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTT 350
           T +    + + +T  T STT   +T + T  + TT
Sbjct: 217 TTSTTSTTPTTSTTPTTSTT---STTSQTSTKSTT 248

 Score = 34.7 bits (78), Expect = 0.82
 Identities = 24/99 (24%), Positives = 43/99 (43%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRP 239
           ++TT   + + T PT  +   +    TTP T+ T   P+T T      T+T   A     
Sbjct: 236 TSTTSQTSTKSTTPTTSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTISTAPTTST 295

Query: 240 WSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTAS 356
            S+  +   + +++  +T +TT        TPA  T ++
Sbjct: 296 TSSTFSTSSASASSVISTTATTSTTFASLTTPATSTAST 334

>gb|AAK61478.1| glycoprotein gp2 [Equine herpesvirus 1]
          Length = 357

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 34/97 (35%), Positives = 42/97 (43%)
 Frame = +3

Query: 66  TTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRPWS 245
           TT A        T VT   S  A TT AT    + P+T TP +   TT T         +
Sbjct: 122 TTTAAPTTAATTTAVTTAASTSAETTTATATATSTPTTTTPTSTTTTTATTTVPTTASTT 181

Query: 246 TPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTAS 356
           T      + +AAT   A+TT   TT A T A  TTA+
Sbjct: 182 TDTTTAATTTAATTTAATTTAATTTAATTTAATTTAA 218

 Score = 42.4 bits (98), Expect = 0.004
 Identities = 36/105 (34%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRP 239
           +ATT A        T  T   +  A TT A T T A  +  T  A   T  T  A     
Sbjct: 232 AATTTAATTTAATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAATTTAATTTA 291

Query: 240 WSTPAAAPRSCSAAT*ATASTTPCWTTRAHT---PARGTTASRGA 365
            +T AA   + +AAT   A+TT   TT A T   P  G+T++ GA
Sbjct: 292 ATTTAA---TTTAATTTAATTTAATTTAATTTGSPTSGSTSTTGA 333

 Score = 42.0 bits (97), Expect = 0.005
 Identities = 35/98 (35%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = +3

Query: 66  TTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRPWS 245
           TT A     T     T   +  A TT A T T A  +  T  A   T  T  A      +
Sbjct: 185 TTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAAT 244

Query: 246 TPAAAPRSCS-AAT*ATASTTPCWTTRAHTPARGTTAS 356
           T AA   S + AAT   A+TT   TT A T A  TTA+
Sbjct: 245 TTAATTSSATTAATTTAATTTAATTTAATTTAATTTAA 282

 Score = 42.0 bits (97), Expect = 0.005
 Identities = 37/104 (35%), Positives = 44/104 (41%), Gaps = 7/104 (6%)
 Frame = +3

Query: 66  TTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRPWS 245
           TT A A   + PT  T P S    T   T PT A  +T T  A   T  T  A      +
Sbjct: 146 TTTATATATSTPTTTT-PTSTTTTTATTTVPTTASTTTDTTTAATTTAATTTAATTTAAT 204

Query: 246 TPAAAPRSCS-------AAT*ATASTTPCWTTRAHTPARGTTAS 356
           T AA   + +       AAT   A+TT   TT A T A  TTA+
Sbjct: 205 TTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAA 248

 Score = 40.8 bits (94), Expect = 0.011
 Identities = 34/107 (31%), Positives = 44/107 (40%), Gaps = 1/107 (0%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTT-TT 215
           T +    + TT A     T     T   +  A TT A T T A  +  T  A   T  TT
Sbjct: 181 TTDTTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATT 240

Query: 216 PPAL*RRPWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTAS 356
             A      ++ A    + +AAT   A+TT   TT A T A  TTA+
Sbjct: 241 TAATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAATTTAA 287

 Score = 40.8 bits (94), Expect = 0.011
 Identities = 34/99 (34%), Positives = 41/99 (41%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRP 239
           + TT A     T     T   +  A TT A T T A  S+ T  A     TT  A     
Sbjct: 213 ATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTSSATTAATTTAATTTAATTTAA 272

Query: 240 WSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTAS 356
            +T A      +AAT   A+TT   TT A T A  TTA+
Sbjct: 273 TTTAATT----TAATTTAATTTAATTTAATTTAATTTAA 307

 Score = 39.3 bits (90), Expect = 0.033
 Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRP 239
           + TT A     T     T   +  A TT A T T A  +  T  A   T  T  A     
Sbjct: 193 ATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTSS 252

Query: 240 WSTPAAAPRSCS-AAT*ATASTTPCWTTRAHTPARGTTAS 356
            +T A    + + AAT   A+TT   TT A T A  TTA+
Sbjct: 253 ATTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAA 292

 Score = 39.3 bits (90), Expect = 0.033
 Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
 Frame = +3

Query: 39  TPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTP 218
           TP     ++TT   A      T  T   +  A TT A T T A  +  T  A   T  T 
Sbjct: 156 TPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAATTTAATTTAATTTAATTTAATT 215

Query: 219 PAL*RRPWSTPAAAPRSCS--AAT*ATASTTPCWTTRAHTPARGTTASRGA 365
            A      +T AA   + +  AAT   A+TT   T+ A T A  T A+  A
Sbjct: 216 TAATTTAATTTAATTTAATTTAATTTAATTTAATTSSATTAATTTAATTTA 266

 Score = 38.5 bits (88), Expect = 0.057
 Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRP 239
           + TT A     T     T   +  A TT A T T A  +  T  A   T  T  +     
Sbjct: 198 ATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTSSATTAA 257

Query: 240 WSTPAAAPRSCS-AAT*ATASTTPCWTTRAHTPARGTTAS 356
            +T A    + + AAT   A+TT   TT A T A  TTA+
Sbjct: 258 TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAA 297

 Score = 36.2 bits (82), Expect = 0.28
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
 Frame = +3

Query: 48  QECRSATTVAMARRLTRP-TVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPA 224
           Q   S TT + +   T P T  + PP+    ++P++T T++  +  T       +++ P+
Sbjct: 40  QSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAAT-------SSSAPS 92

Query: 225 L*RRPWSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTA 353
                 S P +     +  T   ++TTP  TT A T A  TTA
Sbjct: 93  TASSTTSIPTSTSTETTTTTPTASTTTPTTTTAAPTTAATTTA 135

 Score = 34.7 bits (78), Expect = 0.82
 Identities = 33/99 (33%), Positives = 43/99 (43%)
 Frame = +3

Query: 60  SATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTTTTPPAL*RRP 239
           ++TT       T     T   +  A TT A T T A  +  T  A   T  T  A     
Sbjct: 178 ASTTTDTTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTA 237

Query: 240 WSTPAAAPRSCSAAT*ATASTTPCWTTRAHTPARGTTAS 356
            +T AA   + +AAT ++A TT   TT A T A  TTA+
Sbjct: 238 ATTTAA---TTTAATTSSA-TTAATTTAATTTAATTTAA 272

 Score = 34.7 bits (78), Expect = 0.82
 Identities = 36/110 (32%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
 Frame = +3

Query: 30  PKRTPEQECRSATTVAMARRLTRPTVVTLPPSRLAGTTPATTPTRAWPSTRTPRA*RWTT 209
           P  T  Q   +A T + A   T  +  ++P S    TT  TTPT    ST TP     TT
Sbjct: 73  PSSTSTQSSSTAATSSSAPS-TASSTTSIPTSTSTETT-TTTPTA---STTTPT----TT 123

Query: 210 TTPPAL*RRPWSTPAAAPRSCSAAT*-ATASTTPCWTTRAHTPARGTTAS 356
           T  P       +   AA  S    T  ATA++TP  TT   T     T +
Sbjct: 124 TAAPTTAATTTAVTTAASTSAETTTATATATSTPTTTTPTSTTTTTATTT 173



EST assemble image


clone accession position
1 LC057h03_r AV623018 1 529
2 LCL084e06_r AV630804 4 537
3 LCL084e05_r AV630803 4 395




Chlamydomonas reinhardtii
Kazusa DNA Research Institute