KCC002924A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002924A_C01 KCC002924A_c01
gggcgcacgccgcGGAGGACAAGAAGCTGCGCAGCCAGCTGAAGAACCCCCAGGACATTG
AGGCGCAGACCACCGCGCTGCAGATTGCCTCGCTGCGCCGCATCAACTCGGGCACCAAGG
TGATCCTGCTGGACCGCTACGGCCCCCTGGCTGAGGCCGTGGCCCGCGAGCTGGCCAAGA
AGGGCTACGGCAAGGTGTATGTGGTGGTGGGCGGCTTCGACGGCCGCAACGGCTGGATCC
AGTCCAAGCTGCAGATCAAGCCGTACACCGCCACCGCGCTGACCTTCTCGGCGCCGGCCT
TCGGCCGCACCGGCACCACCTCGACCCGCCGCCTGCCCGCCCCCCGCTCGTAAGCGGGCT
CGCAGTGGCTCGCGCACCGGCGGCGGCTCCGTACGGGAGCCAAAGCTGGAGCTAGAGCCG
TGCTAGCGGATACGGTAAGCAACGACAGCAGCAGCAGCAGCAGGAGAGGAGGTGGCGACC
TGCAGGCGCGCTCTACGCTGTGACGGCTGACGGTCGTCATAGATGCGGCGGCGATGGCAG
CAAGTCATGGCGGCGGCGGCCCTGAACGGGGCGCCGTAGGAAGCCGCCTTTCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002924A_C01 KCC002924A_c01
         (593 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_197697.1| expressed protein [Arabidopsis thaliana] gi|975...    70  2e-11
dbj|BAC87637.1| unnamed protein product [Homo sapiens]                 55  7e-07
gb|AAQ13694.1|AF184211_1 MST148 protein [Homo sapiens]                 52  5e-06
ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]         51  1e-05
ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyc...    49  7e-05

>ref|NP_197697.1| expressed protein [Arabidopsis thaliana] gi|9759364|dbj|BAB09823.1|
           emb|CAB75797.1~gene_id:MYJ24.5~similar to unknown
           protein [Arabidopsis thaliana]
           gi|15027883|gb|AAK76472.1| unknown protein [Arabidopsis
           thaliana] gi|19310663|gb|AAL85062.1| unknown protein
           [Arabidopsis thaliana] gi|23397055|gb|AAN31813.1|
           unknown protein [Arabidopsis thaliana]
           gi|34485583|gb|AAQ73179.1| extracellular calcium sensing
           receptor [Arabidopsis thaliana]
          Length = 387

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 33/92 (35%), Positives = 55/92 (58%)
 Frame = +3

Query: 24  KLRSQLKNPQDIEAQTTALQIASLRRINSGTKVILLDRYGPLAEAVARELAKKGYGKVYV 203
           K++  ++N + +EA+  AL+I+ L++IN G+ +I+LD Y   A+ VA+ L   GY   Y+
Sbjct: 273 KVKGIVRNSKRVEAEIAALKISYLKKINKGSNIIILDSYTDSAKIVAKTLKVLGYKNCYI 332

Query: 204 VVGGFDGRNGWIQSKLQIKPYTATALTFSAPA 299
           V  GF G  GW+QS+L    Y  +     +P+
Sbjct: 333 VTDGFSGGRGWLQSRLGTDSYNFSFAQVLSPS 364

>dbj|BAC87637.1| unnamed protein product [Homo sapiens]
          Length = 286

 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 46/128 (35%), Positives = 60/128 (45%), Gaps = 5/128 (3%)
 Frame = +1

Query: 7   TPRRTRSCAAS*RTP--RTLRRRPPRCRLPRCAASTRAPR*SCWTATAPWLRPWPASWPR 180
           +PRRT S A+  RTP   + RR PPR      A+ TR P        +P   P P + PR
Sbjct: 134 SPRRTPSTASPTRTPPRASPRRTPPR------ASPTRTP-----PRASPKRTP-PRASPR 181

Query: 181 RATARCMWWWAASTAATAGSSPSCRSSRTPPPR*PSRRRPSAAPAPPRPAACP---PPAR 351
           R   R     A   A+   + P+   +RTPP   P+R  P+ +PA   P A P   PP  
Sbjct: 182 RTPPRASPTRAPPRASPKRTPPTASPTRTPPRASPTRTPPTESPARTPPRASPTRTPPTE 241

Query: 352 KRARSGSR 375
             AR+ SR
Sbjct: 242 SPARTPSR 249

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 45/143 (31%), Positives = 56/143 (38%), Gaps = 20/143 (13%)
 Frame = +1

Query: 7   TPRRTRSCAAS*RTP--RTLRRRPPRC---RLPRCAASTRAPR*SCWTATAPWLRPW--- 162
           +PRRT   A+  RTP   +L R P R    R+P  A  TR P  +    T P   P    
Sbjct: 53  SPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPPTASPARTPPTESPARTP 112

Query: 163 ---------PASWPRRATARCMWWWAASTAATAGSSPSCRSSRTPPPR*PSRRRPSAAPA 315
                    P + P R   R       STA+   + P     RTPP   P+R  P A+P 
Sbjct: 113 PTASPARTPPRASPTRTPPRASPRRTPSTASPTRTPPRASPRRTPPRASPTRTPPRASPK 172

Query: 316 PPRPAACP---PPARKRARSGSR 375
              P A P   PP     R+  R
Sbjct: 173 RTPPRASPRRTPPRASPTRAPPR 195

 Score = 45.8 bits (107), Expect = 4e-04
 Identities = 43/123 (34%), Positives = 54/123 (42%), Gaps = 9/123 (7%)
 Frame = +1

Query: 7   TPRRTRSCAAS*RTP--RTLRRRPPRC---RLPRCAASTRAPR*SCWTATAPWLRPWPAS 171
           +PRRT   A+  RTP   + +R PPR    R P  A+ TRAP        +P   P P +
Sbjct: 152 SPRRTPPRASPTRTPPRASPKRTPPRASPRRTPPRASPTRAP-----PRASPKRTP-PTA 205

Query: 172 WPRRATARCMWWWAASTAATAGSSPSCRSSRTPPPR*PSR--RRPSAAPAPPR--PAACP 339
            P R   R        T + A + P    +RTPP   P+R   R S    PPR  P   P
Sbjct: 206 SPTRTPPRASPTRTPPTESPARTPPRASPTRTPPTESPARTPSRASTRRTPPRASPTRTP 265

Query: 340 PPA 348
           P A
Sbjct: 266 PRA 268

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 39/119 (32%), Positives = 49/119 (40%), Gaps = 8/119 (6%)
 Frame = +1

Query: 7   TPRRTRSCAAS*RTP--RTLRRRPPRC---RLPRCAASTRAPR*SCWTATAPWLRPW--- 162
           +P RT   A+  RTP   + RR PPR    R P  A+  R P  +  T T P   P    
Sbjct: 161 SPTRTPPRASPKRTPPRASPRRTPPRASPTRAPPRASPKRTPPTASPTRTPPRASPTRTP 220

Query: 163 PASWPRRATARCMWWWAASTAATAGSSPSCRSSRTPPPR*PSRRRPSAAPAPPRPAACP 339
           P   P R   R        T + A +     + RTPP   P+R  P A+P    P A P
Sbjct: 221 PTESPARTPPRASPTRTPPTESPARTPSRASTRRTPPRASPTRTPPRASPKRTPPTASP 279

 Score = 36.6 bits (83), Expect = 0.27
 Identities = 32/98 (32%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
 Frame = +1

Query: 82  RLPRCAASTRAPR*SCWTATAPWLRPWPASWPRRATARCMWWWAASTAATAGSSPSCRSS 261
           R P  A+ TR P  +  T T P  R  P   P RA+ R     A+ T     + P+    
Sbjct: 29  RPPTRASPTRMPPRASPTRTPP--RASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPP 86

Query: 262 RTPPPR*PSRRRPSAAPAPPRPAACPP---PARKRARS 366
             PP R P    P+  P    PA  PP   PAR   R+
Sbjct: 87  TAPPTRTPPTASPARTPPTESPARTPPTASPARTPPRA 124

 Score = 33.5 bits (75), Expect = 2.3
 Identities = 34/114 (29%), Positives = 41/114 (35%), Gaps = 2/114 (1%)
 Frame = +1

Query: 43  RTPRT--LRRRPPRCRLPRCAASTRAPR*SCWTATAPWLRPWPASWPRRATARCMWWWAA 216
           RTP T  L R P    L R   +T        + T P  R  P   P RA+         
Sbjct: 2   RTPYTTSLTRTPHTTSLTRILYTT--------SLTRPPTRASPTRMPPRASPT-----RT 48

Query: 217 STAATAGSSPSCRSSRTPPPR*PSRRRPSAAPAPPRPAACPPPARKRARSGSRT 378
              A+   +P   S R  PPR    R P+ AP    P   PP       S +RT
Sbjct: 49  PPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPPTASPART 102

 Score = 31.6 bits (70), Expect = 8.7
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 2/123 (1%)
 Frame = -3

Query: 363 ASPLTSGGRAGGGSRWCRCGRRPAPRRSARWRCTA*SAAWTGSSRCGRRSRPPPHTPCRS 184
           ASP  +  RA       R   +  P R++  R    ++      R   +  PP  +P R+
Sbjct: 151 ASPRRTPPRASPTRTPPRASPKRTPPRASPRRTPPRASPTRAPPRASPKRTPPTASPTRT 210

Query: 183 P--SWPARGPRPQPGGRSGPAGSPWCPS*CGAARQSAARWSAPQCPGGSSAGCAASCPPR 10
           P  + P R P  +   R+ P  SP       +  ++ +R S  + P  +S       PPR
Sbjct: 211 PPRASPTRTPPTESPARTPPRASPTRTPPTESPARTPSRASTRRTPPRAS---PTRTPPR 267

Query: 9   RAP 1
            +P
Sbjct: 268 ASP 270

>gb|AAQ13694.1|AF184211_1 MST148 protein [Homo sapiens]
          Length = 157

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 42/103 (40%), Positives = 47/103 (44%), Gaps = 5/103 (4%)
 Frame = +1

Query: 88  PRCAASTRAPR*SCWTATAPWLRPWPASWPRRATARCMWWWAASTAATAGSSPSCRSSRT 267
           P  AAS  A   S  +   P +R       RRA ARC WW  AS +A+  S+ S RSSRT
Sbjct: 40  PTSAASPTATARSACSCCVPVVR-------RRARARCAWWPRASASASPASTTS-RSSRT 91

Query: 268 PPPR*PSRRRP-SAAPAPPRPAACPP----PARKRARSGSRTG 381
             PR   RRR  S  PAP  P    P    P R R R     G
Sbjct: 92  SGPRPLGRRRAGSRGPAPGAPKPTRPSWRTPTRARPRPSPPAG 134

>ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]
          Length = 250

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 43/126 (34%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
 Frame = +1

Query: 7   TPRRTRSCAAS*RTPRTLR--RRPPRC---RLPRCAASTRAPR*SCWTATAPWLRPW--- 162
           +PRRT   A+  RTP T    R PP     R P  A+  R P  +  T T P   P    
Sbjct: 80  SPRRTPPTASPTRTPPTESPARTPPTASPARTPSRASPRRTPPRASPTRTPPRASPRRTP 139

Query: 163 PASWPRRATARCMWWWAASTAATAGSSPSCRSSRTPPPR*PSRRRPSAAPAPPRPAACPP 342
           P + PRR   R     A   A+   + P    +RTPP   P+R  P+ +PA   P A P 
Sbjct: 140 PRASPRRTPPRASPTRAPPRASPKRTPPRASPTRTPPRASPTRTPPTESPARTPPTASPA 199

Query: 343 PARKRA 360
               RA
Sbjct: 200 RTPSRA 205

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 44/123 (35%), Positives = 55/123 (43%), Gaps = 9/123 (7%)
 Frame = +1

Query: 7   TPRRTRSCAAS*RTP--RTLRRRPPRC---RLPRCAASTRAPR*SCWTATAPWLRPWPAS 171
           +PRRT   A+  RTP   + RR PPR    R P  A+ TRAP        +P   P P +
Sbjct: 116 SPRRTPPRASPTRTPPRASPRRTPPRASPRRTPPRASPTRAP-----PRASPKRTP-PRA 169

Query: 172 WPRRATARCMWWWAASTAATAGSSPSCRSSRTPPPR*PSRRRPSAAP--APPR--PAACP 339
            P R   R        T + A + P+   +RTP    P R  P A+P   PPR  P   P
Sbjct: 170 SPTRTPPRASPTRTPPTESPARTPPTASPARTPSRASPRRMPPRASPTRTPPRASPTRTP 229

Query: 340 PPA 348
           P A
Sbjct: 230 PRA 232

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 42/123 (34%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
 Frame = +1

Query: 7   TPRRTRSCAAS*RTP--RTLRRRPPRC---RLPRCAASTRAPR*SCWTATAPWLRPW--- 162
           +PRRT   A+  RTP   +  R PPR    R P  A+ TR P  +  T T P   P    
Sbjct: 134 SPRRTPPRASPRRTPPRASPTRAPPRASPKRTPPRASPTRTPPRASPTRTPPTESPARTP 193

Query: 163 ----PASWPRRATARCMWWWAASTAATAGSSPSCRSSRTPPPR*PSRRRPSAAPAPPRPA 330
               PA  P RA+ R M              P    +RTPP   P+R  P A+P    P 
Sbjct: 194 PTASPARTPSRASPRRM-------------PPRASPTRTPPRASPTRTPPRASPKRTPPT 240

Query: 331 ACP 339
           A P
Sbjct: 241 ASP 243

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 43/126 (34%), Positives = 54/126 (42%), Gaps = 9/126 (7%)
 Frame = +1

Query: 7   TPRRTRSCAAS*RTPRTLR--RRPPRC---RLPRCAASTRAPR*SCWTATAPWLRPWPAS 171
           +P RT    +  RTP T    R PPR    R P  A+  R P        +P   P P +
Sbjct: 17  SPARTPPTESPARTPPTASPARTPPRASPARTPPRASPGRTP-----PRASPRRTP-PRA 70

Query: 172 WPRRATARCMWWWAASTAATAGSSPSCRSSRTPPPR*PSRRRPSAAP--APPR--PAACP 339
            PRRA  R        TA+   + P+   +RTPP   P+R    A+P   PPR  P   P
Sbjct: 71  SPRRAPPRASPRRTPPTASPTRTPPTESPARTPPTASPARTPSRASPRRTPPRASPTRTP 130

Query: 340 PPARKR 357
           P A  R
Sbjct: 131 PRASPR 136

 Score = 36.6 bits (83), Expect = 0.27
 Identities = 23/59 (38%), Positives = 31/59 (51%), Gaps = 7/59 (11%)
 Frame = +1

Query: 220 TAATAGSSPSCRSSRTPPPR*PSRRRPSAAPA--PPR--PAACPP---PARKRARSGSR 375
           T +   + P+   +RTPP   P+R  P+A+PA  PPR  PA  PP   P R   R+  R
Sbjct: 6   TTSLTRTPPTASPARTPPTESPARTPPTASPARTPPRASPARTPPRASPGRTPPRASPR 64

 Score = 35.0 bits (79), Expect = 0.79
 Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
 Frame = +1

Query: 109 RAPR*SCWTATAPWLRPWPASWPRRATARCMWWWAASTAATAGSSPSCRSSRTPPPR*PS 288
           R P  +  T T P   P   + P  + AR        TA+ A + P    +RTPP   P 
Sbjct: 2   RTPYTTSLTRTPPTASP-ARTPPTESPAR-----TPPTASPARTPPRASPARTPPRASPG 55

Query: 289 RRRPSAAP--APPR--PAACPPPARKR 357
           R  P A+P   PPR  P   PP A  R
Sbjct: 56  RTPPRASPRRTPPRASPRRAPPRASPR 82

 Score = 35.0 bits (79), Expect = 0.79
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
 Frame = -3

Query: 396 PYGAAAGARATASPLTSGGRAGGGSRWCRCGRRPAPRRSARWRCTA*SAAWTGSSRCGRR 217
           P  + A   + ASP  +  RA       R   R  P R++  R    ++      R   +
Sbjct: 104 PTASPARTPSRASPRRTPPRASPTRTPPRASPRRTPPRASPRRTPPRASPTRAPPRASPK 163

Query: 216 SRPPPHTPCRSP--SWPARGPRPQPGGRSGPAGSPWCPS*CGAARQSAARWSAPQCPGGS 43
             PP  +P R+P  + P R P  +   R+ P  SP       + R+   R S  + P  +
Sbjct: 164 RTPPRASPTRTPPRASPTRTPPTESPARTPPTASPARTPSRASPRRMPPRASPTRTPPRA 223

Query: 42  SAGCAASCPPRRAP 1
           S       PPR +P
Sbjct: 224 S---PTRTPPRASP 234

 Score = 32.3 bits (72), Expect = 5.1
 Identities = 36/143 (25%), Positives = 52/143 (36%), Gaps = 11/143 (7%)
 Frame = -3

Query: 396 PYGAAAGARATASPLTSGGRAGGGSRWCRCGRRPAPRRSARWRCTA*SAAWTGSSRCGRR 217
           P  + A    TASP  +  RA       R      P R++  R    ++      R   R
Sbjct: 23  PTESPARTPPTASPARTPPRASPARTPPRASPGRTPPRASPRRTPPRASPRRAPPRASPR 82

Query: 216 SRPPPHTPCRSP-----------SWPARGPRPQPGGRSGPAGSPWCPS*CGAARQSAARW 70
             PP  +P R+P           + PAR P      R+ P  SP       + R++  R 
Sbjct: 83  RTPPTASPTRTPPTESPARTPPTASPARTPSRASPRRTPPRASPTRTPPRASPRRTPPRA 142

Query: 69  SAPQCPGGSSAGCAASCPPRRAP 1
           S  + P  +S       PPR +P
Sbjct: 143 SPRRTPPRAS---PTRAPPRASP 162

>ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyces avermitilis
           MA-4680] gi|29605870|dbj|BAC69934.1| putative
           protoporphyrinogen oxidase [Streptomyces avermitilis
           MA-4680]
          Length = 474

 Score = 48.5 bits (114), Expect = 7e-05
 Identities = 53/166 (31%), Positives = 67/166 (39%), Gaps = 31/166 (18%)
 Frame = -3

Query: 456 CCCCRCLP----YPLARL*LQLWLP-----YGAAAGARATASPLTSGG----------RA 334
           CC  R  P    +P +      W P      G A+   A +S L S G          R+
Sbjct: 292 CCAPRHPPPRPSWPASSTRPWRWSPSPTAAVGPASPKAAASSCLPSTGAPSRHRRSPPRS 351

Query: 333 GGGSR------WCRCGRRPAPRRSARWRCTA*SAAWTG-SSRCGRRSR-PPPHTPCRSPS 178
           G GSR      WC C RR       R       A+WT  ++ C RR   PP  +P  SP+
Sbjct: 352 GAGSRTRTPTCWC-CARRSGGTARRRSSAGTTPASWTSRATTCARRPAWPPRRSPAASPA 410

Query: 177 WP-ARGPRPQPGGRSGPAG---SPWCPS*CGAARQSAARWSAPQCP 52
            P A    P    R+ PA    SP CP+   AAR++ A  S P  P
Sbjct: 411 GPTACRSTPSATTRAWPASATTSPSCPASPSAARRTTASASRPASP 456

 Score = 38.9 bits (89), Expect = 0.055
 Identities = 37/122 (30%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
 Frame = +1

Query: 25  SCAAS*RTPRTLRRRPPRCRLPRCAASTRAPR*SCWTATAPWLRPWPASWPRRATARCMW 204
           SC  S   P   RR PPR       + TR P  +CW               RR+      
Sbjct: 333 SCLPSTGAPSRHRRSPPRSG---AGSRTRTP--TCWCCA------------RRSGG---- 371

Query: 205 WWAASTAATAGSSPSCRSSRTPP----PR*PSRRRPSAAPAPPRPAACPPPARKRARSGS 372
              A   ++AG++P+  +SR       P  P RR P+A+PA P      P A  RA   S
Sbjct: 372 --TARRRSSAGTTPASWTSRATTCARRPAWPPRRSPAASPAGPTACRSTPSATTRAWPAS 429

Query: 373 RT 378
            T
Sbjct: 430 AT 431

 Score = 33.9 bits (76), Expect = 1.8
 Identities = 34/96 (35%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
 Frame = +1

Query: 115 PR*SCWTATAPWLRPWPASWPRRATARCMWWWAAS-TAATAGSSP-SCRSSRTPPPR*PS 288
           P  SC     P  RP   SWP  +T    W W+ S TAA   +SP +  SS  P    PS
Sbjct: 288 PPPSCCAPRHPPPRP---SWPASSTR--PWRWSPSPTAAVGPASPKAAASSCLPSTGAPS 342

Query: 289 RRRPSAAPAPPRPAACPPPARKRARSGSRTGGGSVR 396
           R R S    PPR  A            +R  GG+ R
Sbjct: 343 RHRRS----PPRSGAGSRTRTPTCWCCARRSGGTAR 374



EST assemble image


clone accession position
1 MX028b10_r BP087210 1 482
2 MX028b10_r BP087210 1 482
3 MXL084a08_r BP097950 277 655




Chlamydomonas reinhardtii
Kazusa DNA Research Institute