Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002922A_C01 KCC002922A_c01
(665 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_304245.1| hypothetical protein XP_304245 [Homo sapiens] 49 7e-05
sp|P02443|KR3A_SHEEP KERATIN, HIGH-SULFUR MATRIX PROTEIN, IIIA3A... 47 2e-04
ref|NP_295856.1| conserved hypothetical protein [Deinococcus rad... 46 4e-04
ref|NP_082542.2| procollagen, type XVI, alpha 1; [a]1 (XVI) coll... 46 6e-04
ref|XP_345585.1| similar to alpha 1 type XVI collagen precursor;... 46 6e-04
>ref|XP_304245.1| hypothetical protein XP_304245 [Homo sapiens]
Length = 208
Score = 48.9 bits (115), Expect = 7e-05
Identities = 47/149 (31%), Positives = 51/149 (33%), Gaps = 5/149 (3%)
Frame = +1
Query: 226 RARSTRSRSWRRFCTRPRRPCPTSCACA---PGCCAPTASGSRSASCT*ATATRCRSAPR 396
RA S+R R+ R +C R CP CA CC P A A RC P
Sbjct: 5 RATSSRCRA-RAWCRRSTCCCPRPRPCARVASTCCRPRA------------APRCPPTPP 51
Query: 397 PSTPW--RTPPCCSTASESDLREEAAVWQSAAWGGGGRDGWKPPLGRWHSDRSDGVIVRG 570
P W RTP CC WG GG R G R
Sbjct: 52 PGPAWPPRTPTCC-------------------WGPGGPQ-----------HRCAGCRHRP 81
Query: 571 TSTAATAAPRTDTCTACAACPGCPGAAGA 657
T T P CTA + PGCP AGA
Sbjct: 82 ACTPTTTTP----CTARRSRPGCPTPAGA 106
>sp|P02443|KR3A_SHEEP KERATIN, HIGH-SULFUR MATRIX PROTEIN, IIIA3A gi|71387|pir||KRSH3A
keratin high-sulfur matrix protein IIIA3A - sheep
Length = 130
Score = 47.4 bits (111), Expect = 2e-04
Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 265 CTRPRRPCPTSC---ACAPGCCAPTASGSRSASCT*ATATRCRSAPRPS-TPWRTPPCC 429
C RP CPTSC C P C A T S C T C SAPR + +RT PCC
Sbjct: 72 CCRPITCCPTSCQAVVCRPCCWATTCCQPVSVQCPCCRPTSCPSAPRTTCRTFRTSPCC 130
>ref|NP_295856.1| conserved hypothetical protein [Deinococcus radiodurans]
gi|7471338|pir||B75310 conserved hypothetical protein -
Deinococcus radiodurans (strain R1)
gi|6459930|gb|AAF11681.1|AE002048_1 conserved
hypothetical protein [Deinococcus radiodurans]
Length = 528
Score = 46.2 bits (108), Expect = 4e-04
Identities = 49/170 (28%), Positives = 66/170 (38%), Gaps = 22/170 (12%)
Frame = -3
Query: 618 CRARVRPWRGSRRGAGASHDDAITA----ITVPAPQRRFPAIP------AAAAPRCTLPN 469
CR R +P RG R+ +T T P+P R P+ P +A R + P
Sbjct: 341 CR-RSKPRRGRRQRPVTRPSSHVTRRRRPATRPSPSGRRPSTPVTGWWPSATGCRLSAPR 399
Query: 468 CCLLPQVRLRGG*TAGRGSPGRTGPRCAPAPGSGSLGA*CAPRTTGCRGTAARGAGARCW 289
C R R GRT PRC P+ GS +PRT+ R A+R +
Sbjct: 400 RCRRATKRCRTA-----TGCGRTSPRCGPSSGSCRAATRRSPRTSPRRARASRASRPTIP 454
Query: 288 TRSPGTCTESPPAS----------GSC--TPCSGPRSRSQSAPYSLQPPG 175
+ + + +PP S G C + S P SRS AP PG
Sbjct: 455 APAANSASAAPPNSPTRKTNWSTPGWCPRSAASTPSSRSPGAPPPRVGPG 504
>ref|NP_082542.2| procollagen, type XVI, alpha 1; [a]1 (XVI) collagen [Mus musculus]
gi|26334095|dbj|BAC30765.1| unnamed protein product [Mus
musculus]
Length = 1580
Score = 45.8 bits (107), Expect = 6e-04
Identities = 52/175 (29%), Positives = 63/175 (35%), Gaps = 5/175 (2%)
Frame = -3
Query: 645 PWTPG---AGGACRARVRPWRGSRRGAGASHDDAITAITVPAPQRRFPAIPAAAAPRCTL 475
P +PG G +A R +G + AG D IT P I A PR
Sbjct: 670 PGSPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGITGQPGISGEPGIRGPAGPRGEK 729
Query: 474 PN-CCLLPQVRLRGG*TAGRGSPGRTGPRCAPAP-GSGSLGA*CAPRTTGCRGTAARGAG 301
+ C P L+G T G PG+ GP+ P P G G G P G +G G
Sbjct: 730 GDGCTACPS--LQGALTDVSGLPGKPGPKGEPGPEGVGHPGKPGQPGLPGVQGPPG-PKG 786
Query: 300 ARCWTRSPGTCTESPPASGSCTPCSGPRSRSQSAPYSLQPPGSPGETSLQQEQEP 136
+ PGT E P G +Q P PPGS GE Q P
Sbjct: 787 TQGEPGPPGTGAEGPQGEPGTQGLPG----TQGLPGPRGPPGSAGEKGAQGSPGP 837
>ref|XP_345585.1| similar to alpha 1 type XVI collagen precursor; collagen XVI, alpha-1
polypeptide [Rattus norvegicus]
Length = 1667
Score = 45.8 bits (107), Expect = 6e-04
Identities = 52/179 (29%), Positives = 63/179 (35%), Gaps = 5/179 (2%)
Frame = -3
Query: 645 PWTPGAG---GACRARVRPWRGSRRGAGASHDDAITAITVPAPQRRFPAIPAAAAPRCTL 475
P PG+G RA R +G + AG D IT P + A P+
Sbjct: 677 PGPPGSGLPGKQGRAGERGLKGQKGDAGNPGDPGTPGITGQPGMSGEPGVRGPAGPKGEK 736
Query: 474 PN-CCLLPQVRLRGG*TAGRGSPGRTGPRCAPAP-GSGSLGA*CAPRTTGCRGTAARGAG 301
+ C P L+G T G PG+ GP+ P P G G G P G +G G
Sbjct: 737 GDGCTACPS--LQGALTDVSGLPGKPGPKGEPGPEGVGRPGKPGQPGLPGVQGPPGL-KG 793
Query: 300 ARCWTRSPGTCTESPPASGSCTPCSGPRSRSQSAPYSLQPPGSPGETSLQQEQEPSRTT 124
+ PGT E P G Q P PPGS GE Q P T
Sbjct: 794 TQGEPGPPGTGAEGPQGEPGTPGLPG----IQGPPGPRGPPGSTGEHGAQGPPGPKGAT 848
Score = 32.7 bits (73), Expect = 5.0
Identities = 43/143 (30%), Positives = 53/143 (36%), Gaps = 12/143 (8%)
Frame = -3
Query: 477 LPNCCLLPQVRLRGG*TAGRGSPGRTGPRCAPAPGSGSLGA*CAPRTTGCRG-TAARGAG 301
LP +P R G RGSPG GP P G++G+ P G RG T G
Sbjct: 1050 LPGPPGMPGQRGEEGPPGMRGSPGLPGP-VGPPGFPGAVGSPGLPGLQGERGPTGLTGDK 1108
Query: 300 ARCWTRSPGTC-------TESPPASGSCTPCSGPRSRSQSAPYSLQPPG-SPGETSLQQE 145
+ PG C SG+C GP + P ++ PPG P SL
Sbjct: 1109 GEPGSGEPGACHLVERTWVWEMAQSGNC--AQGPPGQ-PGYPGAMGPPGLPPSGASLGTG 1165
Query: 144 QEPS---RTTSGAQEELQAVREQ 85
P TT G+ AV Q
Sbjct: 1166 LSPMSCINTTKGSHRANSAVAPQ 1188
