Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002918A_C01 KCC002918A_c01
(754 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S14529 transition protein 2 - mouse gi|54874|emb|CAA34914.1... 38 0.15
ref|XP_210713.3| similar to prot GOR [Homo sapiens] 38 0.20
ref|XP_331349.1| predicted protein [Neurospora crassa] gi|289221... 37 0.26
ref|ZP_00005680.1| COG1529: Aerobic-type carbon monoxide dehydro... 37 0.33
ref|ZP_00141220.1| COG0642: Signal transduction histidine kinase... 37 0.44
>pir||S14529 transition protein 2 - mouse gi|54874|emb|CAA34914.1| unknown
protein [Mus musculus]
Length = 519
Score = 38.1 bits (87), Expect = 0.15
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Frame = +3
Query: 135 SLPAVWPKAFFQVCSFPRSLQKPKSTSRQPKWTS---RQRSCAPRQRSCARSTRKGCWTS 305
SLP VWP ++ S P + P S+SR TS Q +C+ RSC+++ G
Sbjct: 395 SLPRVWPPMDTKMQSLPTTHPHPHSSSRPQSHTSNQCNQCTCSHHCRSCSQAGHAG---- 450
Query: 306 CYTWNTRNIATLSQKTPSARPKSGNNLRCRPCR-AFRGAC 422
+ ++ S P PK + R P R + RG+C
Sbjct: 451 -------SSSSPSPGPPMKHPKPSVHSRHSPARPSHRGSC 483
>ref|XP_210713.3| similar to prot GOR [Homo sapiens]
Length = 687
Score = 37.7 bits (86), Expect = 0.20
Identities = 28/95 (29%), Positives = 40/95 (41%), Gaps = 6/95 (6%)
Frame = +3
Query: 87 KTTKAF--LQLGPSQRPLSLPAVWPKAFFQVCSFPRSLQKPKSTSRQPKWTSRQ---RSC 251
K AF +Q P R ++P WPK + C FP P+ T R R
Sbjct: 51 KQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQRGSACRLPAAPRLTERPSGVRIS 110
Query: 252 APRQRSCARSTRKGCWTSCYTWNTR-NIATLSQKT 353
APR+R + C + YT R +A+ SQ++
Sbjct: 111 APRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRS 145
>ref|XP_331349.1| predicted protein [Neurospora crassa] gi|28922196|gb|EAA31445.1|
predicted protein [Neurospora crassa]
Length = 1401
Score = 37.4 bits (85), Expect = 0.26
Identities = 27/104 (25%), Positives = 46/104 (43%)
Frame = -2
Query: 693 AHTNTLIKLTRGPPAANPASMSTTGHIRRRQVRRSSTVSARRRALQFNSSDHRYHPGETH 514
+++++ IK G A A+ + ++V + R A +++ SD+ P
Sbjct: 393 SNSHSRIKTGLGIAAVALAAAGAAKYYESKKVEKEEAERGRS-ARRYSESDYSRSPSRKR 451
Query: 513 LTDRAESMAPCMLSTSLALCVQCCNLHPRAHMRHERRGRGGTSD 382
RA S+A L T+ A+ V H R+ RH R R +SD
Sbjct: 452 SKSRAGSVAKAALGTAAAVGVVQHYRHKRSKSRHGSRSRSSSSD 495
>ref|ZP_00005680.1| COG1529: Aerobic-type carbon monoxide dehydrogenase, large subunit
CoxL/CutL homologs [Rhodobacter sphaeroides]
Length = 1049
Score = 37.0 bits (84), Expect = 0.33
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Frame = +1
Query: 73 HGLHRKQPRRSCSW------GHRSVLFH--CRLSGPKHFFRFAVFPGHCKSQNRHPGSQN 228
HG HR+QP + + GH H CRL G + + P + +RHP ++
Sbjct: 87 HGHHRRQPSSAHALPLFLRHGHGLQQAHPRCRLLGDRRLYPLPRDPRRVRGLHRHPSERH 146
Query: 229 GHPGSGAARPGSGAAQGARARAA 297
G G G R G G +GA RA+
Sbjct: 147 GR-GDGRTR-GGGRDRGAGRRAS 167
>ref|ZP_00141220.1| COG0642: Signal transduction histidine kinase [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 733
Score = 36.6 bits (83), Expect = 0.44
Identities = 28/81 (34%), Positives = 37/81 (45%)
Frame = +1
Query: 67 RHHGLHRKQPRRSCSWGHRSVLFHCRLSGPKHFFRFAVFPGHCKSQNRHPGSQNGHPGSG 246
R+ G+ ++ R GHR V R +G +H PGH +Q PG HPG+
Sbjct: 51 RYRGMGDRRRGRGERAGHRRV----RPAGARHRPAAPQRPGH-PAQPASPGP--AHPGAA 103
Query: 247 AARPGSGAAQGARARAAGHRV 309
A R G G G RAR R+
Sbjct: 104 AHRAGQGGRPGRRARQRCRRL 124
