>KCC002914A_C01 KCC002914A_c01
GAATGATACTATCGCCTTTGGGCTTTGCAGGGAGCCAAACCCTGTGGGACCGCAAGTCGC
TGATTTGTTGCATTTCGCCTCGGAGGTTGTTGTTCTAGTCGCTTTGCATAGTAGCTTATA
CTAGCAGCACATGCAGGCGCTCAACCAGCGGCCCTCAAGGGCCACGACAAAGACTATGGC
GTCGGGGGCCTACATCGGGGTGAAGCCCGCAGCAAACGTGGTGGGCAAGAAGTCCCCACA
GGGCTTTTGGCAGGTCACGACGAAGCAAATAAGTGCCGCCAAGCGCTCGGGGGCACCCAA
GCGCAAGGTGACCACGATGATGCCAGTGTCCGTGCCCAAGGTGCTGTGCCGGCCACCTGG
GCAGAGGCAGTCCGAGTGGGTGGACCTGTGGGAGGCCTACACCTACCAGAAGGTGGTGTT
CATCAAGGAGGCGATCACGGAGGACGTGGCCAACAACATGATTGCGCTCACGCTGTACCT
GGACTCGCTGGACCAGAAGCGCATTTATTACTGGCTCAACGTGCCCGGC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002914A_C01 KCC002914A_c01
         (529 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_113298.1| ATP-dependent Clp protease proteolytic subunit ...    70  2e-11
gb|AAP80841.1| ATP-dependent Clp protease proteolytic subunit [G...    70  2e-11
gb|AAL14412.1| At1g12410/F5O11_7 [Arabidopsis thaliana]                68  8e-11
ref|NP_563907.1| ATP-dependent Clp protease proteolytic subunit ...    68  8e-11
ref|NP_441890.1| ATP-dependent Clp protease proteolytic subunit ...    63  2e-09

>ref|NP_113298.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
           gi|25289871|pir||G90090 ATP-dependent Clp protease
           proteolytic subunit [imported] - Guillardia theta
           nucleomorph gi|13794482|gb|AAK39857.1|AF165818_65
           ATP-dependent Clp protease proteolytic subunit
           [Guillardia theta]
          Length = 233

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
 Frame = +2

Query: 317 MMPVSVPKVLCRPPGQRQSEWVDLWEAYTYQKVVFIKEAITEDVANNMIALTLYLDSLD- 493
           MMP+ VPKV  R PG   ++WVD++     ++++F+ + I +++AN +IA+ LYLDS D 
Sbjct: 32  MMPIGVPKVAYRVPGSPSADWVDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSEDN 91

Query: 494 QKRIYYWLNVPG 529
            K IY ++N PG
Sbjct: 92  SKPIYMYINSPG 103

>gb|AAP80841.1| ATP-dependent Clp protease proteolytic subunit [Griffithsia
           japonica]
          Length = 114

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 31/71 (43%), Positives = 50/71 (69%), Gaps = 1/71 (1%)
 Frame = +2

Query: 320 MPVSVPKVLCRPPGQRQSEWVDLWEAYTYQKVVFIKEAITEDVANNMIALTLYLDSLD-Q 496
           MP+ VPKVL R PG  Q++WVD++     ++++F+ + I +++AN +IA+ LYL+S D  
Sbjct: 1   MPIGVPKVLFRVPGAPQADWVDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLESEDNS 60

Query: 497 KRIYYWLNVPG 529
           K IY ++N PG
Sbjct: 61  KPIYLYINSPG 71

>gb|AAL14412.1| At1g12410/F5O11_7 [Arabidopsis thaliana]
          Length = 279

 Score = 67.8 bits (164), Expect = 8e-11
 Identities = 40/116 (34%), Positives = 63/116 (53%), Gaps = 3/116 (2%)
 Frame = +2

Query: 191 YIGVKPAANVVGKKSPQGFWQVTTKQISAAKRSGAPK--RKVTTMMPVSVPKVLCRPPGQ 364
           Y G+KP +        Q   +    ++  + +SG  K  R    MMP+  P+V  R   +
Sbjct: 23  YSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSGTGKASRSRVKMMPIGTPRVPYRNREE 82

Query: 365 RQSEWVDLWEAYTYQKVVFIKEAITEDVANNMIALTLYLDSLD-QKRIYYWLNVPG 529
              +WVD+W A   ++V+FI + I E+ +N ++A  LYLD+LD  +RIY +LN PG
Sbjct: 83  GTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDGSRRIYMYLNGPG 138

>ref|NP_563907.1| ATP-dependent Clp protease proteolytic subunit (ClpR2) [Arabidopsis
           thaliana] gi|25453515|pir||T52454 ATP-dependent Clp
           proteinase (EC 3.4.21.-) catalytic chain P2 [imported] -
           Arabidopsis thaliana gi|5360589|dbj|BAA82066.1| nClpP2
           [Arabidopsis thaliana]
           gi|8778627|gb|AAF79635.1|AC025416_9 F5O11.13
           [Arabidopsis thaliana] gi|17065388|gb|AAL32848.1|
           similar to nClpP2 [Arabidopsis thaliana]
           gi|20148625|gb|AAM10203.1| similar to nClpP2
           dbj|BAA82066.1 [Arabidopsis thaliana]
          Length = 279

 Score = 67.8 bits (164), Expect = 8e-11
 Identities = 40/116 (34%), Positives = 63/116 (53%), Gaps = 3/116 (2%)
 Frame = +2

Query: 191 YIGVKPAANVVGKKSPQGFWQVTTKQISAAKRSGAPK--RKVTTMMPVSVPKVLCRPPGQ 364
           Y G+KP +        Q   +    ++  + +SG  K  R    MMP+  P+V  R   +
Sbjct: 23  YSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSGTGKASRSRVKMMPIGTPRVPYRNREE 82

Query: 365 RQSEWVDLWEAYTYQKVVFIKEAITEDVANNMIALTLYLDSL-DQKRIYYWLNVPG 529
              +WVD+W A   ++V+FI + I E+ +N ++A  LYLD+L D +RIY +LN PG
Sbjct: 83  GTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPG 138

>ref|NP_441890.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
           PCC 6803] gi|3023511|sp|P74467|CLP3_SYNY3 Probable
           ATP-dependent Clp protease proteolytic subunit 3
           (Endopeptidase Clp 3) gi|7435689|pir||S76439
           endopeptidase Clp (EC 3.4.21.92) chain P3 [similarity] -
           Synechocystis sp. (strain PCC 6803)
           gi|1653656|dbj|BAA18568.1| ATP-dependent Clp protease
           proteolytic subunit [Synechocystis sp. PCC 6803]
          Length = 202

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 26/71 (36%), Positives = 45/71 (62%), Gaps = 1/71 (1%)
 Frame = +2

Query: 320 MPVSVPKVLCRPPGQRQSEWVDLWEAYTYQKVVFIKEAITEDVANNMIALTLYLDSLD-Q 496
           MP+ VP V  R PG +   W+D++   + ++++F+ + + + +AN ++A  LYLDS D  
Sbjct: 1   MPIGVPSVPFRLPGSQYERWIDIYTRLSQERIIFLGQEVNDSIANRIVAFLLYLDSDDPS 60

Query: 497 KRIYYWLNVPG 529
           K IY ++N PG
Sbjct: 61  KPIYLYINSPG 71

EST assemble image

clone accession position 1 LCL030d03_r AV627673 1 323 2 LC046a03_r AV622162 2 470 3 LC049c01_r AV622402 2 530 4 LCL015e08_r AV626794 10 394 5 LC073d08_r AV624135 21 514 6 LC082a08_r AV624745 22 449

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