Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002904A_C01 KCC002904A_c01
(515 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00011880.1| COG1525: Micrococcal nuclease (thermonuclease... 87 1e-16
ref|NP_437159.1| putative periplasmic protein [Sinorhizobium mel... 87 2e-16
ref|ZP_00052174.1| COG1525: Micrococcal nuclease (thermonuclease... 86 3e-16
emb|CAD31545.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti] 82 3e-15
ref|NP_637399.1| succinoglycan biosynthesis protein [Xanthomonas... 82 4e-15
>ref|ZP_00011880.1| COG1525: Micrococcal nuclease (thermonuclease) homologs
[Rhodopseudomonas palustris]
Length = 384
Score = 87.0 bits (214), Expect = 1e-16
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +2
Query: 260 PGVIAGPARVVDGDTLVINGERIRLYGVDAPESAQQCKDAKGAPYACGLVSKDALDKKIG 439
P IAG V+DG+T+ I+G +IRL G+DAPE+ Q C D KG + CGL ++D L K+ G
Sbjct: 165 PIEIAGIPLVIDGNTVEISGTKIRLQGIDAPETDQLCVDEKGTGWTCGLAARDELAKRFG 224
Query: 440 KAPVTCQVKDKDQYGRNVSVCLLRS 514
+ P TCQV D+YGR++ C + +
Sbjct: 225 EKPWTCQVAGHDKYGRSLGSCAVNA 249
>ref|NP_437159.1| putative periplasmic protein [Sinorhizobium meliloti]
gi|25364643|pir||C95919 probable periplasmic protein
[imported] - Sinorhizobium meliloti (strain 1021)
magaplasmid pSymB gi|15140504|emb|CAC49019.1| putative
periplasmic protein [Sinorhizobium meliloti]
Length = 169
Score = 86.7 bits (213), Expect = 2e-16
Identities = 49/101 (48%), Positives = 67/101 (65%), Gaps = 2/101 (1%)
Frame = +2
Query: 206 SLALHLGLVL-ASSANASSPGVIAGPARVVDGDTLVINGERIRLYGVDAPESAQQCKDAK 382
S+ + L L+L A A A+ P I G A V+DGDT+ I GERIRL+GVDAPES Q+C++A
Sbjct: 6 SIGVTLALLLFAHFAFAADP--ITGRATVIDGDTIEIRGERIRLHGVDAPESWQKCENAD 63
Query: 383 GAPYACGLVSKDALDKKIGKA-PVTCQVKDKDQYGRNVSVC 502
G+ Y CG + LD+ + ++ PV CQ +D+Y R V VC
Sbjct: 64 GSSYQCGREAAQELDRFLAESRPVRCQFVQRDRYKRFVGVC 104
>ref|ZP_00052174.1| COG1525: Micrococcal nuclease (thermonuclease) homologs
[Magnetospirillum magnetotacticum]
Length = 200
Score = 85.9 bits (211), Expect = 3e-16
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = +2
Query: 245 ANASSPGV-IAGPARVVDGDTLVINGERIRLYGVDAPESAQQCKDAKGAPYACGLVSKDA 421
A+AS G + G ARV+ GDTL++ G I LYGV AP Q C +A+G YACG S A
Sbjct: 43 ADASRAGESVTGRARVLSGDTLLVGGRVIGLYGVAAPGLKQSCLNAQGQSYACGAHSAKA 102
Query: 422 LDKKIGKAPVTCQVKDKDQYGRNVSVCL 505
L + + PVTCQ+++ D YGR +SVCL
Sbjct: 103 LAAHLKETPVTCQIRETDAYGRAISVCL 130
>emb|CAD31545.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti]
Length = 257
Score = 82.4 bits (202), Expect = 3e-15
Identities = 43/84 (51%), Positives = 53/84 (62%), Gaps = 1/84 (1%)
Frame = +2
Query: 254 SSPGVIAGPARVVDGDTLVINGERIRLYGVDAPESAQQCKDAKGAPYACGLVSKDALDKK 433
S P IAG A V+DGDT+ ++G+RIR G+DAPES Q C DAKG Y+CG S DALD
Sbjct: 50 SKPEPIAGVASVIDGDTIEVHGQRIRFNGIDAPESKQYCSDAKGFDYSCGRRSADALDAF 109
Query: 434 IGKA-PVTCQVKDKDQYGRNVSVC 502
+ + PV C D+Y R V C
Sbjct: 110 LAASRPVHCTFVTWDRYHRFVGDC 133
>ref|NP_637399.1| succinoglycan biosynthesis protein [Xanthomonas campestris pv.
campestris str. ATCC 33913] gi|21113158|gb|AAM41323.1|
succinoglycan biosynthesis protein [Xanthomonas
campestris pv. campestris str. ATCC 33913]
Length = 231
Score = 82.0 bits (201), Expect = 4e-15
Identities = 43/97 (44%), Positives = 59/97 (60%)
Frame = +2
Query: 221 LGLVLASSANASSPGVIAGPARVVDGDTLVINGERIRLYGVDAPESAQQCKDAKGAPYAC 400
+G++ S A A+ + G A V DGDTL + +RIRL+G+DAPESAQQC G + C
Sbjct: 14 IGVLTVSPALAAD---LIGRATVTDGDTLTVAQQRIRLWGIDAPESAQQCTARNGQAWPC 70
Query: 401 GLVSKDALDKKIGKAPVTCQVKDKDQYGRNVSVCLLR 511
G + ALD + V CQ KD D+YGR V+ C ++
Sbjct: 71 GRRAAAALDAYVQDKTVRCQPKDTDRYGRIVAECFVQ 107
