Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002897A_C01 KCC002897A_c01
(518 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_859506.1| hypothetical protein Chr3_0730 [Leishmania majo... 39 0.052
emb|CAA61623.1| DRPLA [Rattus norvegicus] 38 0.068
ref|NP_058924.1| dentatorubral pallidoluysian atrophy [Rattus no... 38 0.068
emb|CAB58415.1| possible MUS308 homolog [Leishmania major] 37 0.12
pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [... 37 0.15
>ref|NP_859506.1| hypothetical protein Chr3_0730 [Leishmania major]
gi|21629370|gb|AAM69047.1|AC125735_77 hypothetical
protein Chr3_0730 [Leishmania major]
Length = 2936
Score = 38.5 bits (88), Expect = 0.052
Identities = 41/134 (30%), Positives = 52/134 (38%), Gaps = 5/134 (3%)
Frame = -2
Query: 403 TPVDVRPWARTGP--APLSQA--AHTRRSVPAGRV-RLLHRQAMCATPKTTRARGTLSTS 239
+PVD +P + G AP+++ A +PA V R R AT R R ++
Sbjct: 40 SPVDEKPQLQQGSQEAPVAEQPDASLPLPLPASPVTRRRKRPLTAATAAIARGRSPRGSA 99
Query: 238 ATRLAATCPQVQLQATVVHKHVHIHTRARAAWRTAPGGLVTPRRGAVHSLPLPLPPAPHS 59
A AA L T H T AA RT P +P + A P P PP P S
Sbjct: 100 AAHPAAAPLSALLAPTTRHPPQRSRTATAAASRTTP----SPPKSA----PPPTPPPPSS 151
Query: 58 PASHADAASAPPLR 17
S PP R
Sbjct: 152 SPPSLGKDSVPPPR 165
>emb|CAA61623.1| DRPLA [Rattus norvegicus]
Length = 1182
Score = 38.1 bits (87), Expect = 0.068
Identities = 52/195 (26%), Positives = 68/195 (34%), Gaps = 42/195 (21%)
Frame = -1
Query: 464 PHTTDNLPAQ--LRPLRLVLCQHAR*CPPLGPHWARAAQPSRAH----EAISPGWPRAPP 303
PH T NLP LRPL +A PP AQP H A+ G PP
Sbjct: 296 PHVTPNLPPPPALRPLN-----NASASPP-----GMGAQPIPGHLPSPHAMGQGMSGLPP 345
Query: 302 AP--------------------PGHVRNTQNNTCERDAIYISD----ATSRYLSSSTVTS 195
P PG ++C ++ S ATS+Y +S T+ S
Sbjct: 346 GPEKGPTLAPSPHPLPPASSSAPGPPMRYPYSSCSSSSVAASSSSSAATSQYPASQTLPS 405
Query: 194 YCCT*ARAHTHAGSRGLAHRPG-----GSGHAAPWSRALTPPPSSAGTAQPS-------F 51
Y + S ++++P A WS+ PPP G P+ F
Sbjct: 406 Y----PHSFPPPTSMSVSNQPPKYTQPSLPSQAVWSQGPPPPPPPYGRLLPNNSTHPGPF 461
Query: 50 PC*RGLGPATPPQPA 6
P G A PP PA
Sbjct: 462 PPTGGQSTAHPPAPA 476
>ref|NP_058924.1| dentatorubral pallidoluysian atrophy [Rattus norvegicus]
gi|1706520|sp|P54258|DRPL_RAT ATROPHIN-1
(DENTATORUBRAL-PALLIDOLUYSIAN ATROPHY PROTEIN)
gi|1049102|gb|AAA80337.1| atrophin-1 [Rattus norvegicus]
Length = 1183
Score = 38.1 bits (87), Expect = 0.068
Identities = 52/195 (26%), Positives = 68/195 (34%), Gaps = 42/195 (21%)
Frame = -1
Query: 464 PHTTDNLPAQ--LRPLRLVLCQHAR*CPPLGPHWARAAQPSRAH----EAISPGWPRAPP 303
PH T NLP LRPL +A PP AQP H A+ G PP
Sbjct: 296 PHVTPNLPPPPALRPLN-----NASASPP-----GMGAQPIPGHLPSPHAMGQGMSGLPP 345
Query: 302 AP--------------------PGHVRNTQNNTCERDAIYISD----ATSRYLSSSTVTS 195
P PG ++C ++ S ATS+Y +S T+ S
Sbjct: 346 GPEKGPTLAPSPHPLPPASSSAPGPPMRYPYSSCSSSSVAASSSSSAATSQYPASQTLPS 405
Query: 194 YCCT*ARAHTHAGSRGLAHRPG-----GSGHAAPWSRALTPPPSSAGTAQPS-------F 51
Y + S ++++P A WS+ PPP G P+ F
Sbjct: 406 Y----PHSFPPPTSMSVSNQPPKYTQPSLPSQAVWSQGPPPPPPPYGRLLPNNNTHPGPF 461
Query: 50 PC*RGLGPATPPQPA 6
P G A PP PA
Sbjct: 462 PPTGGQSTAHPPAPA 476
>emb|CAB58415.1| possible MUS308 homolog [Leishmania major]
Length = 2207
Score = 37.4 bits (85), Expect = 0.12
Identities = 48/175 (27%), Positives = 70/175 (39%), Gaps = 11/175 (6%)
Frame = -2
Query: 505 NAPSPRGKGRETRAHTQLTTCPHNCDRFALCCANTPVDVRPWAR-TGPAPLSQAAHTRRS 329
+AP PR T A + T + C A V WA +G AP++ A R+
Sbjct: 276 SAPVPRVSSAPTPADVCVAT-DYTVHAHPWCSATA---VPAWASASGAAPVAPDADALRA 331
Query: 328 V-PAGRVRLLHRQAMCATPKTTRARGTLSTSATRLAATCPQVQLQATVVHKHVHIHTRAR 152
P+ VR + R++ C+T + R ++ + T T P Q + H
Sbjct: 332 PGPSSAVR-VGRESHCSTAVSEHHRTPVAAAMTAPTITSPSTQSGKWFLSALEHEQRDYA 390
Query: 151 AAWRTAP-----GGLVTPRRGAVHS----LPLPLPPAPHSPASHADAASAPPLRP 14
A AP L+ P R HS LP+PPA +P++ A S PP P
Sbjct: 391 TAISPAPPSLQSPSLLPPYRSPCHSGASEQVLPVPPA--APSTPKAAPSTPPSLP 443
>pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [imported] -
Boreogadus saida gi|2078483|gb|AAC60129.1| antifreeze
glycopeptide AFGP polyprotein precursor
Length = 507
Score = 37.0 bits (84), Expect = 0.15
Identities = 40/141 (28%), Positives = 49/141 (34%), Gaps = 7/141 (4%)
Frame = -2
Query: 409 ANTPVDVR-PWARTGPAPLSQAAHTRRSVPAGRVRLLHRQAMCATPKTTRARGTLSTSAT 233
A TP P PA + A + A A ATP T T +T+A
Sbjct: 125 AETPARAATPATAATPATAATPATAATAATAATSATAATAARAATPATAATPATPATAAR 184
Query: 232 RLAATCPQVQLQATVVHKHVHIHTRARAAWRTAPGGLVTPRRGAVHSLPL--PLPPAPHS 59
A P A T A AA TP R A + P P P +
Sbjct: 185 AARAATPATAATAATAA------TAATAATAATAATAATPARAARAATPATAPTPATAAT 238
Query: 58 PASHADAASAP----PLRPSR 8
PA+ A AA+AP P R +R
Sbjct: 239 PATAATAATAPTAATPARAAR 259
