Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002878A_C01 KCC002878A_c01
(528 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB02011.1| contains similarity to signal peptidase (leader ... 75 4e-13
ref|NP_189102.2| chloroplast thylakoidal processing peptidase -r... 75 4e-13
gb|AAN72018.1| chloroplast thylakoidal processing peptidase, put... 75 4e-13
gb|AAP50954.1| putative chloroplast thylakoidal processing pepti... 61 8e-09
pir||T45525 WSC4 homolog [imported] - yeast (Kluyveromyces marxi... 60 2e-08
>dbj|BAB02011.1| contains similarity to signal peptidase (leader
peptidase)~gene_id:MOB24.17 [Arabidopsis thaliana]
Length = 310
Score = 75.5 bits (184), Expect = 4e-13
Identities = 40/96 (41%), Positives = 55/96 (56%), Gaps = 8/96 (8%)
Frame = +1
Query: 265 SSSGASSSNNSNSNSSSSNNAGSAGSSGSDGDY--------VSAFGLRISKDDLLTIALA 420
S G S+ + ++ S ++ G G D D + L + DD T+ +A
Sbjct: 81 SCYGIKDSSETTKSAPSLDSGDGGGGDGGDDDKGEVEEKNRLFPEWLDFTSDDAQTVFVA 140
Query: 421 VAISYGIRSFVAEPRFIPSLSMYPTFDVGDRLIAEK 528
+A+S R F+AEPR+IPSLSMYPTFDVGDRL+AEK
Sbjct: 141 IAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEK 176
>ref|NP_189102.2| chloroplast thylakoidal processing peptidase -related [Arabidopsis
thaliana]
Length = 291
Score = 75.5 bits (184), Expect = 4e-13
Identities = 40/96 (41%), Positives = 55/96 (56%), Gaps = 8/96 (8%)
Frame = +1
Query: 265 SSSGASSSNNSNSNSSSSNNAGSAGSSGSDGDY--------VSAFGLRISKDDLLTIALA 420
S G S+ + ++ S ++ G G D D + L + DD T+ +A
Sbjct: 62 SCYGIKDSSETTKSAPSLDSGDGGGGDGGDDDKGEVEEKNRLFPEWLDFTSDDAQTVFVA 121
Query: 421 VAISYGIRSFVAEPRFIPSLSMYPTFDVGDRLIAEK 528
+A+S R F+AEPR+IPSLSMYPTFDVGDRL+AEK
Sbjct: 122 IAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEK 157
>gb|AAN72018.1| chloroplast thylakoidal processing peptidase, putative [Arabidopsis
thaliana]
Length = 291
Score = 75.5 bits (184), Expect = 4e-13
Identities = 40/96 (41%), Positives = 55/96 (56%), Gaps = 8/96 (8%)
Frame = +1
Query: 265 SSSGASSSNNSNSNSSSSNNAGSAGSSGSDGDY--------VSAFGLRISKDDLLTIALA 420
S G S+ + ++ S ++ G G D D + L + DD T+ +A
Sbjct: 62 SCYGIKDSSETTKSAPSLDSGDGGGGDGGDDDKGEVEEKNRLFPEWLDFTSDDAQTVFVA 121
Query: 421 VAISYGIRSFVAEPRFIPSLSMYPTFDVGDRLIAEK 528
+A+S R F+AEPR+IPSLSMYPTFDVGDRL+AEK
Sbjct: 122 IAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEK 157
>gb|AAP50954.1| putative chloroplast thylakoidal processing peptidase [Oryza sativa
(japonica cultivar-group)]
Length = 470
Score = 61.2 bits (147), Expect = 8e-09
Identities = 45/144 (31%), Positives = 65/144 (44%), Gaps = 14/144 (9%)
Frame = +1
Query: 139 RTAPARSMAVRNSNQDMESRTTTSDAKAEHAAQQAAASSSSSSSSGASSSNNSNSNSSSS 318
RT PA + + R ++ + S + +S +SSGASS+
Sbjct: 203 RTKPAPAPSPRPAHVPSPAVAAPSKVGVKALVGSGVINSGVINSSGASSNVGVGVKPLVG 262
Query: 319 NNAGSAGSSGSDGDYVSAFGLRIS--------------KDDLLTIALAVAISYGIRSFVA 456
+ A ++G++G A G DD T+ AV + RS +A
Sbjct: 263 SGAINSGAAGMVRKSSPALGAAAEVSRRNWLSRWVSSCSDDAKTVFAAVTVPLLYRSSLA 322
Query: 457 EPRFIPSLSMYPTFDVGDRLIAEK 528
EPR IPS SMYPTFDVGDR++A+K
Sbjct: 323 EPRSIPSKSMYPTFDVGDRILADK 346
>pir||T45525 WSC4 homolog [imported] - yeast (Kluyveromyces marxianus var.
lactis) gi|5531272|emb|CAB50897.1| WSC4 homologue
[Kluyveromyces lactis]
Length = 446
Score = 59.7 bits (143), Expect = 2e-08
Identities = 31/97 (31%), Positives = 59/97 (59%)
Frame = +1
Query: 172 NSNQDMESRTTTSDAKAEHAAQQAAASSSSSSSSGASSSNNSNSNSSSSNNAGSAGSSGS 351
+S D S T++S + + ++ +++SSSSSSSS ++SS+ S+S+SSSS+++ S+ SS S
Sbjct: 146 SSTSDTGSATSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSTSSSSSSSSSSSSSSSSSSS 205
Query: 352 DGDYVSAFGLRISKDDLLTIALAVAISYGIRSFVAEP 462
S+ + T+ ++++ Y + + AEP
Sbjct: 206 SSSSSSSSSSSPTAQTTTTLEPSISVLYSVETITAEP 242
