KCC002864A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC002864A_C01 KCC002864A_c01
aggtcacagtgacacctacaatctgatttCGCGCCATCCATAAGAAGAAACAGCATTGCA
GACGCGTTTCCCAACGGCGCTCGTTTAGTGTAGGCCATGCGCTCCCTCGCGACGCCCGGC
CGCAGTGGGCGCATGCACCATGACTTGGTCTGCCGCTCCCGATCGAGAATTAGGCCATGC
GTTGCACTGCACGCGTCGGCCAGTGGCGCGCCAGGGCCATCCGGCGGGAACTCGGGTTTG
CCTATCATTCGTGCCATGAAGCTGCCGAACCAAGCAGATAGTGTATTCAACCCAAAGGAC
AGCAGGGACCTCCGGAGTGCCGTGCTGGATGCACCGACGAAGAGCGTTTCGGACCTGGAC
TACCTCTCGGAACTGCTGGCCATCCAGCAAAGCGATGGCCCTAAAAACCTCGGATTCTTC
GGGACTCGCAACATGGGTGTCACACACCAAAAGCTCGTGGAGATCCTCGCGTACGCATAC
GCATCCACGGGCAACCACATCTTCACCTCGGGCGCCACGGGAACCAACGCGGCCGTGATC
AAGGGCGCCCTGCGCGCCAACTGCCCGGACAAGCTGACGGTGCTGCTGCCGCAGAGCCTC
AGCAAGCAGCCCTACGAGTCGCAGGAGCTCTTATCGCAGGTGGCCAACCTGCAGGAGATG
CCGCAGAACGACCACCTGCCGCTCATGGAGGCGTCCAGGATCTGCAACCGCAAGATCATC
TCGCACATTCAGCAGGTGGTGTGCTTCGCCTTCCACGACAGTCGGTTACTGCTCGAAACC
TGCCAGGAGGCCAAGGAGATGAAGAAGATCGTGACGCTCTTCTACCTCGACTAGTCCCTC
GGCGCGGCGAGTCCCTTAGGCGAGGCAGGCCATGCAAGTGGGTGTGTAATGGCCGTGCCA
ATCCCTCACACGTGGGGCAATTGTTTCCGCCGCGTCTCTCGTGGTAGAGCCTGTAACCAT
TATGAGACGGAAAGGCGGCGCCAGCACCGCGCCGCCGCTTGTACCATGATTTTATGTGTG
TCCATTTGGCCTGTCTGGGACTGTCCCCTCTGTAACATCCGCATCCATTTGGCCGCCTCA
TGCGGGCGGCGAATAAGGTGAGGTGGCGTTGCGCAGCACTTCTACCTGGGTCTCTGCCGT
TGGTGTTGGCTGGGCGCGCATGAGACCACTGTGCGATGAGACTAGAATCGTGCGGCGTGC
TGTCCATGCGCGCTATCGGGCATCCGCGTACTGTGT
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002864A_C01 KCC002864A_c01
(1236 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_850404.1| predicted protein [Arabidopsis thaliana] 242 9e-63
gb|AAM61639.1| unknown [Arabidopsis thaliana] 237 3e-61
ref|NP_191546.1| expressed protein [Arabidopsis thaliana] gi|113... 236 6e-61
pir||T00674 hypothetical protein At2g43940 [imported] - Arabidop... 202 8e-51
ref|NP_441901.1| unknown protein [Synechocystis sp. PCC 6803] gi... 181 2e-44
>ref|NP_850404.1| predicted protein [Arabidopsis thaliana]
Length = 289
Score = 242 bits (618), Expect = 9e-63
Identities = 121/192 (63%), Positives = 151/192 (78%)
Frame = +1
Query: 256 MKLPNQADSVFNPKDSRDLRSAVLDAPTKSVSDLDYLSELLAIQQSDGPKNLGFFGTRNM 435
+++P QA ++ S V + K +D+DY+ ELLAIQQ GP+++GFFGTRNM
Sbjct: 105 LRIPTQAQAIVEGSGS------VAVSELKPAADVDYIQELLAIQQQ-GPRSIGFFGTRNM 157
Query: 436 GVTHQKLVEILAYAYASTGNHIFTSGATGTNAAVIKGALRANCPDKLTVLLPQSLSKQPY 615
G HQ+L+EIL+YA T NHI+TSGA+GTNAAVI+GALRA P+ LTV+LPQSL KQP
Sbjct: 158 GFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAERPELLTVILPQSLKKQPP 217
Query: 616 ESQELLSQVANLQEMPQNDHLPLMEASRICNRKIISHIQQVVCFAFHDSRLLLETCQEAK 795
ESQELLS+V N+ E P NDHLPL+EASR+CN IIS +QQV+CFAFHDS+LL+ETCQEAK
Sbjct: 218 ESQELLSKVQNVVEKPHNDHLPLLEASRLCNMDIISQVQQVICFAFHDSKLLMETCQEAK 277
Query: 796 EMKKIVTLFYLD 831
++KIVTLFYLD
Sbjct: 278 NLRKIVTLFYLD 289
>gb|AAM61639.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 237 bits (605), Expect = 3e-61
Identities = 118/192 (61%), Positives = 149/192 (77%)
Frame = +1
Query: 256 MKLPNQADSVFNPKDSRDLRSAVLDAPTKSVSDLDYLSELLAIQQSDGPKNLGFFGTRNM 435
+++P QA ++ S + + + V D+DY+ ELLAIQQ GP+ +GFFGTRNM
Sbjct: 104 LRIPTQAQAIVEGPGSLAV------SELQRVPDVDYIQELLAIQQQ-GPRTIGFFGTRNM 156
Query: 436 GVTHQKLVEILAYAYASTGNHIFTSGATGTNAAVIKGALRANCPDKLTVLLPQSLSKQPY 615
G HQ+L++IL+YA T NHI+TSGA GTNAAVI+GALRA P+ LTV+LPQSL KQP
Sbjct: 157 GFMHQELIQILSYAMVITKNHIYTSGAAGTNAAVIRGALRAERPELLTVILPQSLKKQPP 216
Query: 616 ESQELLSQVANLQEMPQNDHLPLMEASRICNRKIISHIQQVVCFAFHDSRLLLETCQEAK 795
ESQELLS+V N+ E P NDHLPL+EASR+CN IIS +QQ++CFAFHDS+LL+ETCQEAK
Sbjct: 217 ESQELLSKVQNVIEKPHNDHLPLLEASRLCNMDIISQVQQIICFAFHDSKLLMETCQEAK 276
Query: 796 EMKKIVTLFYLD 831
++KIVTLFYLD
Sbjct: 277 NLRKIVTLFYLD 288
>ref|NP_191546.1| expressed protein [Arabidopsis thaliana] gi|11357602|pir||T47811
hypothetical protein F24G16.140 - Arabidopsis thaliana
gi|7019681|emb|CAB75806.1| putative protein [Arabidopsis
thaliana]
Length = 288
Score = 236 bits (602), Expect = 6e-61
Identities = 117/192 (60%), Positives = 149/192 (76%)
Frame = +1
Query: 256 MKLPNQADSVFNPKDSRDLRSAVLDAPTKSVSDLDYLSELLAIQQSDGPKNLGFFGTRNM 435
+++P QA ++ S + + + V D+DY+ ELLAIQQ GP+ +GFFGTRNM
Sbjct: 104 LRIPTQAQAIVEGPGSLAV------SELQRVPDVDYIQELLAIQQQ-GPRTIGFFGTRNM 156
Query: 436 GVTHQKLVEILAYAYASTGNHIFTSGATGTNAAVIKGALRANCPDKLTVLLPQSLSKQPY 615
G HQ+L++IL+YA T NHI+TSGA GTNAAVI+GALRA P+ LTV+LPQSL KQP
Sbjct: 157 GFMHQELIQILSYAMVITKNHIYTSGAAGTNAAVIRGALRAERPELLTVILPQSLKKQPP 216
Query: 616 ESQELLSQVANLQEMPQNDHLPLMEASRICNRKIISHIQQVVCFAFHDSRLLLETCQEAK 795
ESQELLS+V N+ E P NDHLPL+EASR+CN IIS +QQ++CFAFHDS+LL+ETCQEA+
Sbjct: 217 ESQELLSKVQNVIEKPHNDHLPLLEASRLCNMDIISQVQQIICFAFHDSKLLMETCQEAR 276
Query: 796 EMKKIVTLFYLD 831
++KIVTLFYLD
Sbjct: 277 NLRKIVTLFYLD 288
>pir||T00674 hypothetical protein At2g43940 [imported] - Arabidopsis thaliana
gi|3212851|gb|AAC23402.1| unknown protein [Arabidopsis
thaliana]
Length = 383
Score = 202 bits (515), Expect = 8e-51
Identities = 102/168 (60%), Positives = 128/168 (75%)
Frame = +1
Query: 256 MKLPNQADSVFNPKDSRDLRSAVLDAPTKSVSDLDYLSELLAIQQSDGPKNLGFFGTRNM 435
+++P QA ++ S V + K +D+DY+ ELLAIQQ GP+++GFFGTRNM
Sbjct: 105 LRIPTQAQAIVEGSGS------VAVSELKPAADVDYIQELLAIQQQ-GPRSIGFFGTRNM 157
Query: 436 GVTHQKLVEILAYAYASTGNHIFTSGATGTNAAVIKGALRANCPDKLTVLLPQSLSKQPY 615
G HQ+L+EIL+YA T NHI+TSGA+GTNAAVI+GALRA P+ LTV+LPQSL KQP
Sbjct: 158 GFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAERPELLTVILPQSLKKQPP 217
Query: 616 ESQELLSQVANLQEMPQNDHLPLMEASRICNRKIISHIQQVVCFAFHD 759
ESQELLS+V N+ E P NDHLPL+EASR+CN IIS +QQV+CFAFHD
Sbjct: 218 ESQELLSKVQNVVEKPHNDHLPLLEASRLCNMDIISQVQQVICFAFHD 265
>ref|NP_441901.1| unknown protein [Synechocystis sp. PCC 6803] gi|7469581|pir||S76450
hypothetical protein - Synechocystis sp. (strain PCC
6803) gi|1653667|dbj|BAA18579.1| ORF_ID:slr1926~unknown
protein [Synechocystis sp. PCC 6803]
Length = 223
Score = 181 bits (460), Expect = 2e-44
Identities = 93/172 (54%), Positives = 126/172 (73%)
Frame = +1
Query: 316 SAVLDAPTKSVSDLDYLSELLAIQQSDGPKNLGFFGTRNMGVTHQKLVEILAYAYASTGN 495
S V++ PT LD L++ LA Q G K + G+R++ +THQ+L+E+++YA GN
Sbjct: 58 SQVVNIPT-----LDTLAQELAAIQQTGSKRIALLGSRHVPITHQQLIEMMSYALVLGGN 112
Query: 496 HIFTSGATGTNAAVIKGALRANCPDKLTVLLPQSLSKQPYESQELLSQVANLQEMPQNDH 675
H+ TSGATGTN+AVIKGA+RA+ P+ LTV+LPQSL +QP ES+ L QV +L E +ND
Sbjct: 113 HLVTSGATGTNSAVIKGAMRAD-PNLLTVILPQSLDRQPRESRNQLGQVVHLVENTENDS 171
Query: 676 LPLMEASRICNRKIISHIQQVVCFAFHDSRLLLETCQEAKEMKKIVTLFYLD 831
L L EAS ICNR+I+S QQ++CFAFH+S LL+TC EA+E +K+VTLFY D
Sbjct: 172 LSLGEASTICNREIVSRCQQLICFAFHESHTLLQTCAEAEEQRKLVTLFYFD 223
EST assemble image
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clone |
accession |
position |
1 |
MX230f03_r |
BP090891 |
1 |
295 |
2 |
LCL071g08_r |
AV630039 |
30 |
340 |
3 |
LC056d10_r |
AV622909 |
153 |
643 |
4 |
MXL092d12_r |
BP098378 |
183 |
685 |
5 |
LCL082b11_r |
AV630655 |
292 |
733 |
6 |
LC041h11_r |
AV621866 |
615 |
1133 |
7 |
LC027c10_r |
AV620822 |
744 |
1236 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute