Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002858A_C01 KCC002858A_c01
(537 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_612737.1| UL112 [Chimpanzee cytomegalovirus] gi|19881123|... 38 0.096
gb|AAP68391.1| hypothetical protein [Oryza sativa (japonica cult... 36 0.37
gb|AAM08777.1|AC016780_7 Putative retroelement [Oryza sativa] 35 0.82
ref|NP_216266.1| fadD1 [Mycobacterium tuberculosis H37Rv] gi|158... 35 0.82
ref|XP_295878.2| hypothetical protein XP_295878 [Homo sapiens] 34 1.1
>ref|NP_612737.1| UL112 [Chimpanzee cytomegalovirus]
gi|19881123|gb|AAM00743.1|AF480884_95 UL112 [chimpanzee
cytomegalovirus]
Length = 731
Score = 37.7 bits (86), Expect = 0.096
Identities = 39/127 (30%), Positives = 49/127 (37%), Gaps = 8/127 (6%)
Frame = -2
Query: 410 TSPSTPPA*ATYVSYTSNQCPVAKFK--------ARHVIQNPDDAVGEPVTISGPSSRGT 255
T +TPPA AT+ + + PV + K R DDAV P T +G RG
Sbjct: 575 TVTATPPAAATHTTTATASRPVCQIKPYVVNPVTTRPAADEEDDAV-RPTTSAGGGHRGR 633
Query: 254 ALVGGARAWFVTECSSGPPGFHA*TAWPGRRAACRARQAGKAWLQTAGGQGG*GRETVKS 75
H+ A GRR R+ + G GG GG R+T S
Sbjct: 634 R------------------ANHSDAAGTGRRGRSRSARGG-------GGTGG-RRQTSSS 667
Query: 74 LTRRERR 54
TRR RR
Sbjct: 668 STRRSRR 674
>gb|AAP68391.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 538
Score = 35.8 bits (81), Expect = 0.37
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -2
Query: 182 TAWPGRRAACRARQAGKAWLQTAGGQGG*GRETVKSLT--RRERRAGLGY 39
T GRRA RA +G W+ GG GG G V+ +T R ER GY
Sbjct: 87 TTIQGRRARARASGSGAGWIWARGGGGGGGGWLVELVTCARAEREISAGY 136
>gb|AAM08777.1|AC016780_7 Putative retroelement [Oryza sativa]
Length = 779
Score = 34.7 bits (78), Expect = 0.82
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = -2
Query: 404 PSTPPA*ATYVSYTSNQCPVAKFKARHVIQNPDDAVGEPVTISGPSSRGTALVGGARAWF 225
P PP ++Y+ + A+ HV + D ++ E +T +G S + T+ G +W
Sbjct: 553 PPPPPPPPPQINYSVSTAAAARSSGHHVFRIRDYSLLEAITPNGKSIKSTSFAVGGHSWH 612
Query: 224 VTECSSGPPGFH 189
V +G H
Sbjct: 613 VEYYPNGYDADH 624
>ref|NP_216266.1| fadD1 [Mycobacterium tuberculosis H37Rv]
gi|15841215|ref|NP_336252.1| very-long-chain acyl-CoA
synthetase, putative [Mycobacterium tuberculosis
CDC1551] gi|31792938|ref|NP_855431.1| POSSIBLE
FATTY-ACID-COA LIGASE FADD1 (FATTY-ACID-COA SYNTHETASE)
(FATTY-ACID-COA SYNTHASE) [Mycobacterium bovis subsp.
bovis AF2122/97] gi|7477927|pir||G70986 probable coA
ligase - Mycobacterium tuberculosis (strain H37RV)
gi|2131015|emb|CAB09316.1| fadD1 [Mycobacterium
tuberculosis H37Rv] gi|13881438|gb|AAK46066.1|
very-long-chain acyl-CoA synthetase, putative
[Mycobacterium tuberculosis CDC1551]
gi|31618529|emb|CAD94481.1| POSSIBLE FATTY-ACID-COA
LIGASE FADD1 (FATTY-ACID-COA SYNTHETASE) (FATTY-ACID-COA
SYNTHASE) [Mycobacterium bovis subsp. bovis AF2122/97]
Length = 532
Score = 34.7 bits (78), Expect = 0.82
Identities = 19/52 (36%), Positives = 25/52 (47%), Gaps = 8/52 (15%)
Frame = -2
Query: 404 PSTPPA*--------ATYVSYTSNQCPVAKFKARHVIQNPDDAVGEPVTISG 273
P TPP A Y T +C VA+F A + N D+A+GE V +G
Sbjct: 307 PGTPPGSIGRGAHGVAVYNGETVTECAVARFDAHGALTNADEAIGELVNTTG 358
>ref|XP_295878.2| hypothetical protein XP_295878 [Homo sapiens]
Length = 583
Score = 34.3 bits (77), Expect = 1.1
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +3
Query: 75 RLNRLPALASLPSGRLQPCLSSLPGPTSGPSTRPRCLSMKSRRT*ATFCHKPSASPANQG 254
R R L S P+GR + C+ + P P + P RPR L RR+ C PA +
Sbjct: 347 RPRRHRGLHSAPAGRAR-CVQATPEPAAAPGMRPR-LGAPPRRSSRFVCEGGPDRPAARP 404
Query: 255 GSTTR 269
G +TR
Sbjct: 405 GPSTR 409
