Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002857A_C01 KCC002857A_c01
(687 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO00696.1| putative reverse transcriptase [Oryza sativa (jap... 38 0.13
ref|NP_250897.1| hypothetical protein [Pseudomonas aeruginosa PA... 37 0.22
dbj|BAB14204.1| unnamed protein product [Homo sapiens] 37 0.28
pir||S49915 extensin-like protein - maize gi|600118|emb|CAA84230... 37 0.37
emb|CAD39799.1| OSJNBa0071G03.12 [Oryza sativa (japonica cultiva... 37 0.37
>gb|AAO00696.1| putative reverse transcriptase [Oryza sativa (japonica
cultivar-group)] gi|31433141|gb|AAP54694.1| putative
reverse transcriptase [Oryza sativa (japonica
cultivar-group)]
Length = 563
Score = 38.1 bits (87), Expect = 0.13
Identities = 41/133 (30%), Positives = 55/133 (40%)
Frame = -2
Query: 605 RVKTQNAKHPYNGARHAPSSPQLSSLPPPTKSNRQSTPLRIPVHEPLAVVAHHVAKPPLC 426
R+ + H G RHA S+ L S PL +P PL +A A P C
Sbjct: 23 RLDERTNDHGETGRRHA-SADALEHRDAAATSPPPPPPLALPPRSPLHPLASSAAASP-C 80
Query: 425 CETVQSLAAAAGLQLVPSQPPRVQMLSGRATPVCRGLPCKLKMCTRPD*ASAMPQPQASC 246
++ SLAA ++ S PPR+ + A+P LPC+ C R S P P
Sbjct: 81 RHSLASLAA-----VLASPPPRL-LRRRFASPPPPRLPCR---CARLSTPSPPPLPPPPP 131
Query: 245 PLAATRGDTKCSC 207
LA+ R C C
Sbjct: 132 RLASPR---SCLC 141
>ref|NP_250897.1| hypothetical protein [Pseudomonas aeruginosa PA01]
gi|11349473|pir||F83369 hypothetical protein PA2207
[imported] - Pseudomonas aeruginosa (strain PAO1)
gi|9948230|gb|AAG05595.1|AE004647_4 hypothetical protein
PA2207 [Pseudomonas aeruginosa PAO1]
Length = 506
Score = 37.4 bits (85), Expect = 0.22
Identities = 42/177 (23%), Positives = 61/177 (33%), Gaps = 26/177 (14%)
Frame = +2
Query: 224 RLWWRLTGSWPAAAAWRMLNQVECTFSACKAGPCTPALLSHSASARVVAVKERAANRRQQ 403
R W RL W W V C GP + +S+S + R +E N +
Sbjct: 243 RTWARLPRYW---LTWLRSALVGCWMGVTPGGPTAASFMSYSLARRFSKNRENFGNGEVE 299
Query: 404 PGFARSRSTGAVSQHGALPLLA--VHGRGYGGVCSGGLISWG--------------AARM 535
A + + LP+L + G V GGL+ WG +
Sbjct: 300 GVIAPETADHSAGTSALLPMLTLGIPGSATAAVMLGGLMIWGLHPGPTLFVEQHDFVWGL 359
Query: 536 IAEGWMGH---------AVPHCMGVLRFAF*P*AALIAF-CVLTLSSTHCGTVAVVL 676
IA ++G+ VP +LR F A +I C + S H + VVL
Sbjct: 360 IASMYLGNVVSLIVVLATVPLFASILRIPFAIVAPIIVMVCAIGAYSVHNAMLDVVL 416
>dbj|BAB14204.1| unnamed protein product [Homo sapiens]
Length = 639
Score = 37.0 bits (84), Expect = 0.28
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 551 SSPQLSSLPPPTK--SNRQSTPLRIPVHEPLAVVAHHVAKPPLCCETVQSLAAAAGLQLV 378
S+P L+ P P +N STPL +PV PLA A P+ C + L+
Sbjct: 226 STPGLALFPGPPSPVANSTSTPLTLPVQSPLATAASASTSAPVSC--------GSSASLL 277
Query: 377 PSQPPRVQMLSGRATPVCRGLPCKLK 300
P L +TP LP +K
Sbjct: 278 RGPHPGTSDLHISSTPAATTLPVMIK 303
>pir||S49915 extensin-like protein - maize gi|600118|emb|CAA84230.1|
extensin-like protein [Zea mays]
gi|1096557|prf||2111476A extensin-like domain
Length = 1188
Score = 36.6 bits (83), Expect = 0.37
Identities = 29/106 (27%), Positives = 45/106 (42%)
Frame = -2
Query: 554 PSSPQLSSLPPPTKSNRQSTPLRIPVHEPLAVVAHHVAKPPLCCETVQSLAAAAGLQLVP 375
PSSP+ S P S+ TP P P++ + PP + +LA + V
Sbjct: 712 PSSPEKPSPPKEPVSSPPQTPKSSPPPAPVS------SPPPTPVSSPPALAPVSSPPSVK 765
Query: 374 SQPPRVQMLSGRATPVCRGLPCKLKMCTRPD*ASAMPQPQASCPLA 237
S PP + S P + P +++ + P P P++S PLA
Sbjct: 766 SSPPPAPLSSPPPAPQVKSSPPPVQVSSPP------PAPKSSPPLA 805
>emb|CAD39799.1| OSJNBa0071G03.12 [Oryza sativa (japonica cultivar-group)]
Length = 410
Score = 36.6 bits (83), Expect = 0.37
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Frame = -2
Query: 611 LLRVKTQNAKHPYNGARHA----PSSPQLSSLPPPTKSNRQSTPLRIPVHEPLAV----- 459
LL K N NG +H P SL P Q+ + V E +
Sbjct: 247 LLTKKMANQPASSNGEKHQGNTNPRQDYSFSLTPVPGQRNQNEKRKCRVREDICCFNCQG 306
Query: 458 VAHHVAKPPLCCETVQSLAAAAGLQLVPSQ----PPRVQMLSGRATPVCRGLPCKLKMCT 291
+ H K C +++AA+ + P P R+ + + R++P+ R + T
Sbjct: 307 MGHFADK----CPKPRNIAASTSVHATPCNRKLAPQRIVIHASRSSPIAR-------VAT 355
Query: 290 RPD*ASAMPQPQAS 249
P ASA+PQPQ S
Sbjct: 356 APTPASALPQPQPS 369
