KCC002851A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002851A_C01 KCC002851A_c01
acaaagCCTCTTATAATCGTGTCTGCGCGCACTGTGCACGAAACTTCTTCTTGAATGATT
CTTGCAAGCTCGGCACCGGCTGCCGCGTCTGGCAACTTCTTTGCCTATGTGAAGCCCTCA
GGTCTGCTTGGACTCTTTGGCTCACGCGACTCTGCCTCATCGCGGATTGACAAGGCTGCC
GCAAGGTACGCCGAGGCTGCCCCCAAGTCACCACAGAGTGTGTCTGTTGGAAACCCAACT
GTCACAAAGTTCTGCTACCCTGGCGGCGCCATCGCGGTCCAGCCCGGAGTGCAGGCCATT
ACCGACCACCTCGTGCGCATTACGCCGTACGTGCACAACTCCAAGGACCAGGTGCTGGTC
TTCTTCGGCACCCTCAGCAACCTGCACGAGCTTTGCGCGCGTCACCATGAGTTTAGCAGC
CGCGGCAAGAGCGTGCTAGACCCCTCCGCCGCCTCCGGCACGGGCGCGCAGACGACAACG
TGCCTGCTCCGGATGTACCAGCACTTTGCCGGCAAGGAAGTCATGATGCTAGCTGAGCTG
CAGGGGCAGTACGCATTCGTCTTGTACGACGCCGTGAAGAAGCAGGCGTTCGCGGCGCGG
GACCCATCCGGCTCTGAGCCGCTGTTCTACAAGCTAGACACCGACGGTGCGGTGCTGTTC
ACCAACGACGTGGACTCACTGCCCACCGGCGAGGCCGACCACAAGGGCTGGAAGGAGCTG
GCGCCGGGGCACTACATGTGTGGCCGCACCATAACGCAGTTTGCGCTGTCGCTGGACGGC
CTGncaacacgcgtccacaaagag


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002851A_C01 KCC002851A_c01
         (804 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T06984 hypothetical protein wali7 - wheat (fragment) gi|451...    56  6e-07
pir||T07830 aluminum-induced protein - rape gi|3123745|dbj|BAA25...    54  4e-06
ref|NP_809464.1| asparagine synthetase B [glutamine-hydrolyzing]...    54  4e-06
ref|NP_197415.1| aluminium-induced protein - like [Arabidopsis t...    53  7e-06
ref|NP_199196.1| aluminum-induced protein-related [Arabidopsis t...    52  1e-05

>pir||T06984 hypothetical protein wali7 - wheat (fragment)
           gi|451193|gb|AAC37416.1| wali7 gi|1090845|prf||2019486B
           wali7 gene
          Length = 270

 Score = 56.2 bits (134), Expect = 6e-07
 Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
 Frame = +1

Query: 319 ITPYVHNSKDQVLVFF-GTLSNLHELCARHHEFSSRGKSVLDPSAASGTGAQTTTCLLRM 495
           + P    +KD++   F G L NL  L ++ +  S  G  VL    A  T        LR 
Sbjct: 64  LLPRSFAAKDEIFCLFEGVLDNLGRL-SQQYGLSKGGNEVLLVIEAYKT--------LRD 114

Query: 496 YQHFAGKEVMMLAELQGQYAFVLYDAVKKQAFAARDPSGSEPLFYKLDTDGAVLFTNDVD 675
              +      ML++L G YAFVL+D        A DP G  PLF+ +  DG V F++D+D
Sbjct: 115 RAPYPAS--FMLSQLTGSYAFVLFDKSTSSLLVASDPEGKVPLFWGITADGCVAFSDDID 172

Query: 676 SL 681
            L
Sbjct: 173 LL 174

>pir||T07830 aluminum-induced protein - rape gi|3123745|dbj|BAA25999.1|
           aluminum-induced [Brassica napus]
          Length = 244

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 53/192 (27%), Positives = 81/192 (41%), Gaps = 6/192 (3%)
 Frame = +1

Query: 124 LLGLFGSRDSASSRIDKAAARYAEAAPKSPQSVSVGNPTVTKFCYPG-GAIAVQPG--VQ 294
           +LG+F      S RI         A  ++P   + G+  V KF      A++VQ G  VQ
Sbjct: 1   MLGIF------SGRIVSLPEELVAAGNRTPSPKTTGSVLVNKFVEKNPSAVSVQVGDYVQ 54

Query: 295 AITDHLVR--ITPYVHNSKDQVLVFF-GTLSNLHELCARHHEFSSRGKSVLDPSAASGTG 465
               H     + P    +KD++   F G+L NL  L  + +  +     VL    A  T 
Sbjct: 55  LAYSHHKESPLRPRSFGAKDEIFCLFQGSLDNLGSL-KQQYGLAKNANEVLLVIEAYKT- 112

Query: 466 AQTTTCLLRMYQHFAGKEVMMLAELQGQYAFVLYDAVKKQAFAARDPSGSEPLFYKLDTD 645
                  LR    +    V+  + L G +AFV++D      F A D  G  PL++ +  D
Sbjct: 113 -------LRDRAPYPANHVV--SHLSGDFAFVVFDKSTSTLFVASDQEGKVPLYWGITAD 163

Query: 646 GAVLFTNDVDSL 681
           G V F +D++ L
Sbjct: 164 GYVAFADDIELL 175

>ref|NP_809464.1| asparagine synthetase B [glutamine-hydrolyzing] [Bacteroides
           thetaiotaomicron VPI-5482] gi|29337855|gb|AAO75658.1|
           asparagine synthetase B [glutamine-hydrolyzing]
           [Bacteroides thetaiotaomicron VPI-5482]
          Length = 559

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 3/208 (1%)
 Frame = +1

Query: 121 GLLGLFGSRDSASSRIDKAAARYAEAAPKSPQSVSVGNPTVTKFCYPGGAIAVQPGVQAI 300
           G+ G+   +       DKA     +   + P    +         Y GG+  +     +I
Sbjct: 3   GIAGILNIKTQTKELRDKALKMAQKIRHRGPDWSGI---------YVGGSAILAHERLSI 53

Query: 301 TDHLVRITPYVHNSKDQVLVFFGTLSNLHELCARH---HEFSSRGKSVLDPSAASGTGAQ 471
            D      P     + Q L   G + N  ++ AR+   ++F               TG+ 
Sbjct: 54  VDPQSGGQPLYSPDRKQALAVNGEIYNHRDIRARYAGQYDFQ--------------TGSD 99

Query: 472 TTTCLLRMYQHFAGKEVMMLAELQGQYAFVLYDAVKKQAFAARDPSGSEPLFYKLDTDGA 651
               +L +Y+    K +  L E+ G +AFVLYD  K +   ARDP G  PL+   D DG 
Sbjct: 100 CEV-ILALYKD---KGIHFLEEISGIFAFVLYDEEKDEFLIARDPIGVIPLYIGKDKDGK 155

Query: 652 VLFTNDVDSLPTGEADHKGWKELAPGHY 735
           + F +++ +L   E     ++   PGHY
Sbjct: 156 IYFGSELKAL---EGFCNEYEPFLPGHY 180

>ref|NP_197415.1| aluminium-induced protein - like [Arabidopsis thaliana]
           gi|14532644|gb|AAK64050.1| putative aluminium-induced
           protein [Arabidopsis thaliana]
           gi|21280809|gb|AAM44947.1| putative aluminium-induced
           protein [Arabidopsis thaliana]
          Length = 234

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 6/192 (3%)
 Frame = +1

Query: 124 LLGLFGSRDSASSRIDKAAARYAEAAPKSPQSVSVGNPTVTKFCYPG-GAIAVQPG--VQ 294
           +LG+F      S  I         A  ++P   + G+  V +F      A++VQ G  VQ
Sbjct: 1   MLGIF------SGAIVSPPEELVAAGSRTPSPKTTGSTLVNRFVEKNPSAVSVQVGDYVQ 54

Query: 295 AITDHLVR--ITPYVHNSKDQVLVFF-GTLSNLHELCARHHEFSSRGKSVLDPSAASGTG 465
               H     + P    +KD++   F G+L NL  L  + +  +     VL    A  T 
Sbjct: 55  LAYSHHNESPLRPRSFGAKDEIFCLFQGSLDNLGSL-KQQYGLAKNANEVLLVIEAYKT- 112

Query: 466 AQTTTCLLRMYQHFAGKEVMMLAELQGQYAFVLYDAVKKQAFAARDPSGSEPLFYKLDTD 645
                  LR    +    V+  A L G +AFV++D      F A D  G  PL++ +  D
Sbjct: 113 -------LRDRAPYPANHVV--AHLSGDFAFVVFDKSTSTLFVASDQVGKVPLYWGITAD 163

Query: 646 GAVLFTNDVDSL 681
           G V F +DVD L
Sbjct: 164 GYVAFADDVDLL 175

>ref|NP_199196.1| aluminum-induced protein-related [Arabidopsis thaliana]
           gi|10177953|dbj|BAB11312.1| aluminum-induced
           protein-like [Arabidopsis thaliana]
           gi|15028025|gb|AAK76543.1| putative aluminum-induced
           protein [Arabidopsis thaliana]
           gi|21436085|gb|AAM51243.1| putative aluminum-induced
           protein [Arabidopsis thaliana]
           gi|21537246|gb|AAM61587.1| aluminum-induced protein-like
           [Arabidopsis thaliana]
          Length = 251

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 22/61 (36%), Positives = 39/61 (63%)
 Frame = +1

Query: 526 MLAELQGQYAFVLYDAVKKQAFAARDPSGSEPLFYKLDTDGAVLFTNDVDSLPTGEADHK 705
           ++ +  G++AF+L+D+VKK  FAA D  GS P F+  D +G ++F+++ + +  G A   
Sbjct: 124 VVRDFHGKFAFILFDSVKKTVFAAADADGSVPFFWGTDAEGHLVFSDNTEMVKKGCAKSY 183

Query: 706 G 708
           G
Sbjct: 184 G 184



EST assemble image


clone accession position
1 LC024e01_r AV620619 1 535
2 LC060a05_r AV623177 7 532
3 LC057c01_r AV622971 7 518
4 MX257e08_r BP092671 9 507
5 LC051h02_r AV622606 285 804
6 LC028e03_r AV620911 290 779




Chlamydomonas reinhardtii
Kazusa DNA Research Institute