Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002849A_C01 KCC002849A_c01
(473 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00005176.1| COG1638: TRAP-type C4-dicarboxylate transport... 35 0.34
gb|AAO15672.1|AF463499_1 basic protein CKT1 [Mus musculus] 35 0.59
ref|XP_142014.1| basic protein CKT1 [Mus musculus] 35 0.59
emb|CAE17915.1| Hypothetical protein R13H4.8 [Caenorhabditis ele... 27 0.62
ref|NP_494936.1| putative secreted or extracellular protein fami... 27 0.63
>ref|ZP_00005176.1| COG1638: TRAP-type C4-dicarboxylate transport system, periplasmic
component [Rhodobacter sphaeroides]
Length = 519
Score = 35.4 bits (80), Expect = 0.34
Identities = 27/110 (24%), Positives = 42/110 (37%), Gaps = 9/110 (8%)
Frame = -1
Query: 425 PHAHPVPRSCSQRPSHSCWRREMCRRYTRLLAH---------HPVRTTLMRATTTTTSIA 273
P A PR S S W+R +C + +A P T + T+ ++A
Sbjct: 43 PPASSSPRRASMSSSTESWKRSVCSTQSASVASLVRICSVSLRPAIQTEAATSATSATMA 102
Query: 272 TSLFLLCIYTVPAAQAQRCK*RALAVNPCCEPLRYITKAAERKPSLISIS 123
TS T P + +L P C P+R T+ R+P+ +S
Sbjct: 103 TSGMSESRSTRPRSAGGSSAHGSLGRAPACRPVRSSTRPPSRRPACDKLS 152
>gb|AAO15672.1|AF463499_1 basic protein CKT1 [Mus musculus]
Length = 180
Score = 34.7 bits (78), Expect = 0.59
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 270 CCN*CCCCCCAHQRRPYR 323
CC+ CC CCC H R YR
Sbjct: 78 CCHCCCHCCCLHSRPSYR 95
>ref|XP_142014.1| basic protein CKT1 [Mus musculus]
Length = 180
Score = 34.7 bits (78), Expect = 0.59
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 270 CCN*CCCCCCAHQRRPYR 323
CC+ CC CCC H R YR
Sbjct: 78 CCHCCCHCCCLHSRPSYR 95
>emb|CAE17915.1| Hypothetical protein R13H4.8 [Caenorhabditis elegans]
Length = 212
Score = 27.3 bits (59), Expect(2) = 0.62
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 406 GTGCACGCCG 435
G GC CGCCG
Sbjct: 124 GCGCGCGCCG 133
Score = 26.2 bits (56), Expect(2) = 0.62
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 270 CCN*CCCCCC 299
CC CCCCC
Sbjct: 88 CCRPRCCCCC 97
>ref|NP_494936.1| putative secreted or extracellular protein family member precursor
(2F356) [Caenorhabditis elegans] gi|7496569|pir||T15651
hypothetical protein C27A2.5 - Caenorhabditis elegans
gi|13592364|gb|AAK31463.1| Hypothetical protein C27A2.5
[Caenorhabditis elegans]
Length = 188
Score = 27.3 bits (59), Expect(2) = 0.63
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 406 GTGCACGCCG 435
G GC CGCCG
Sbjct: 121 GCGCGCGCCG 130
Score = 26.2 bits (56), Expect(2) = 0.63
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 270 CCN*CCCCCC 299
CC CCCCC
Sbjct: 87 CCRPKCCCCC 96
