KCC002848A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002848A_C01 KCC002848A_c01
gCGCGATCAAACATTCCGGTACCTGCTTGCCTGCTTGCGGCAGGACCAAGTTTTCGTCTC
AAGCGTAGCGCCGTCCAAGCCGCAGCATCCACACAATTGACGTGCTTATTGGAAACAAAT
ACAATTCAATCAGTCCACGTCGCGACATCGCAAGCATTCTGACAGTGGCGTTCGCCCTGT
CTCCTCGGACGCAACACCATGCAGCAGGTCTGCACGCAGCGATGCCCTAGCAGAAGCGCC
GCCTCTCGCTCGCAATTTCAACTGTTCTCGGTGGTACCTGCATCGCGGGCTCGGGCGCCG
CAGCTCAGAGTGCGCGCTGACGCAGCGGCGCCGGCGAGTGGGGCTGCCAACGCGCCGGGC
AAGGTGGTGTGCATCGGCGAGGCGCTGTTTGATTTGATTGCAGATCAGAAGGGTGTGCCC
CGTGAGAAAGTGCGGAGCTGGAAGCCGTATGCTGGAGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002848A_C01 KCC002848A_c01
         (458 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_440881.1| fructokinase [Synechocystis sp. PCC 6803] gi|74...    49  3e-05
ref|ZP_00108202.1| COG0524: Sugar kinases, ribokinase family [No...    46  2e-04
ref|NP_484561.1| fructokinase [Nostoc sp. PCC 7120] gi|25287485|...    43  0.001
ref|NP_855977.1| POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacter...    37  0.10
ref|NP_923448.1| fructokinase [Gloeobacter violaceus] gi|3521106...    36  0.18

>ref|NP_440881.1| fructokinase [Synechocystis sp. PCC 6803] gi|7434230|pir||S77227
           fructokinase (EC 2.7.1.4) - Synechocystis sp. (strain
           PCC 6803) gi|1652641|dbj|BAA17561.1| fructokinase
           [Synechocystis sp. PCC 6803]
          Length = 307

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 21/32 (65%), Positives = 25/32 (77%)
 Frame = +1

Query: 361 KVVCIGEALFDLIADQKGVPREKVRSWKPYAG 456
           +VVC GE LFD +ADQ GVP E+V+SW  YAG
Sbjct: 3   EVVCFGEMLFDCLADQLGVPLEQVKSWTNYAG 34

>ref|ZP_00108202.1| COG0524: Sugar kinases, ribokinase family [Nostoc punctiforme]
          Length = 325

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 18/32 (56%), Positives = 25/32 (77%)
 Frame = +1

Query: 361 KVVCIGEALFDLIADQKGVPREKVRSWKPYAG 456
           +V+C+GE LFD +ADQ G+  E+V+SW PY G
Sbjct: 5   RVLCLGEILFDCLADQLGLKLEEVKSWTPYPG 36

>ref|NP_484561.1| fructokinase [Nostoc sp. PCC 7120] gi|25287485|pir||AD1871
           fructokinase [imported] - Nostoc sp. (strain PCC 7120)
           gi|17129862|dbj|BAB72475.1| fructokinase [Nostoc sp. PCC
           7120]
          Length = 325

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 17/32 (53%), Positives = 24/32 (74%)
 Frame = +1

Query: 361 KVVCIGEALFDLIADQKGVPREKVRSWKPYAG 456
           +V+C+GE LFD +ADQ G+  E+V+SW  Y G
Sbjct: 5   RVLCLGEVLFDCLADQLGLKLEQVKSWTAYPG 36

>ref|NP_855977.1| POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis subsp.
           bovis AF2122/97] gi|31619077|emb|CAD97189.1| POSSIBLE
           CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis subsp.
           bovis AF2122/97]
          Length = 197

 Score = 37.0 bits (84), Expect = 0.10
 Identities = 29/83 (34%), Positives = 33/83 (38%)
 Frame = +2

Query: 140 SRHRKHSDSGVRPVSSDATPCSRSARSDALAEAPPLARNFNCSRWYLHRGLGRRSSECAL 319
           S HR +     R   S ++P SR          P     F C RW L R  GRR   C+ 
Sbjct: 119 SMHRSNGADCGRWSVSASSPASRMR----WPRTPSGRSEFRCGRWSLGRSSGRRHG-CSS 173

Query: 320 TQRRRRVGLPTRRARWCASARRC 388
           T R  R   PT R RW     RC
Sbjct: 174 TPRWARRS-PTCRRRWFTRRSRC 195

>ref|NP_923448.1| fructokinase [Gloeobacter violaceus] gi|35211063|dbj|BAC88443.1|
           fructokinase [Gloeobacter violaceus]
          Length = 320

 Score = 36.2 bits (82), Expect = 0.18
 Identities = 15/31 (48%), Positives = 19/31 (60%)
 Frame = +1

Query: 364 VVCIGEALFDLIADQKGVPREKVRSWKPYAG 456
           V+C+GE L D +ADQ   P  +V SW  Y G
Sbjct: 5   VLCLGEMLLDCLADQPDRPEAQVASWTSYPG 35



EST assemble image


clone accession position
1 MX016g06_r BP086786 1 458
2 LC023d08_r AV620535 2 436
3 MX022b06_r BP086986 2 388




Chlamydomonas reinhardtii
Kazusa DNA Research Institute