Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002846A_C01 KCC002846A_c01
(526 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_643983.1| oxidoreductase [Xanthomonas axonopodis pv. citr... 39 0.031
ref|NP_638982.1| oxidoreductase [Xanthomonas campestris pv. camp... 39 0.053
ref|XP_147296.1| SFFV proviral integration 1 [Mus musculus] 38 0.069
dbj|BAC65530.1| mKIAA0324 protein [Mus musculus] 38 0.090
ref|NP_780438.1| RIKEN cDNA 5033413A03 [Mus musculus] gi|2635495... 38 0.090
>ref|NP_643983.1| oxidoreductase [Xanthomonas axonopodis pv. citri str. 306]
gi|21110062|gb|AAM38519.1| oxidoreductase [Xanthomonas
axonopodis pv. citri str. 306]
Length = 266
Score = 39.3 bits (90), Expect = 0.031
Identities = 25/65 (38%), Positives = 31/65 (47%)
Frame = +3
Query: 276 AAGAGTGLASGRWTQRNPHSGAAAAARAGVGAPPQCLGADQRGVEDHAQNLDVGRNGCDA 455
A GA +AS R Q PHS A AAA+ G+ A L + G ++ G DA
Sbjct: 143 AGGAIVNIASTRAWQSEPHSEAYAAAKGGLVAFTHALALSE-GPHVRVNSISPGWISTDA 201
Query: 456 WRVPQ 470
WR PQ
Sbjct: 202 WRAPQ 206
>ref|NP_638982.1| oxidoreductase [Xanthomonas campestris pv. campestris str. ATCC
33913] gi|21114917|gb|AAM42906.1| oxidoreductase
[Xanthomonas campestris pv. campestris str. ATCC 33913]
Length = 268
Score = 38.5 bits (88), Expect = 0.053
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 258 IPQRCRAA--GAGTGLASGRWTQRNPHSGAAAAARAGVGAPPQCLGADQRGVEDHAQNLD 431
+P +AA GA +AS R Q PHS A AAA+ G+ A L + G + ++
Sbjct: 137 LPALAKAADGGAIVNIASTRAWQSEPHSEAYAAAKGGLVAMTHALALSE-GPQVRVNSIS 195
Query: 432 VGRNGCDAWRVP 467
G DAWR P
Sbjct: 196 PGWISTDAWRAP 207
>ref|XP_147296.1| SFFV proviral integration 1 [Mus musculus]
Length = 169
Score = 38.1 bits (87), Expect = 0.069
Identities = 29/104 (27%), Positives = 42/104 (39%), Gaps = 9/104 (8%)
Frame = -1
Query: 364 TPARAAAAAPEWGF-RCVH--LPLARPVPAPAARHRWGIPARS------QHIYTGRQRCE 212
+P +++ W + RC LP P PA R S Q + R
Sbjct: 61 SPRSYSSSIATWSWNRCTSSILPWCHPTPASVTRFPTCPGCASLIKPCPQPTSRAQMRRR 120
Query: 211 LRAQCLPAHCLGKRWQLSEA*QIFACKGRVCAQSSVGCRSACWT 80
+R + LP CL ++ Q+F C GR A+ C S+CWT
Sbjct: 121 VRGRALPWRCLMEKLMAWSLGQVF-CTGRQAARKRFACTSSCWT 163
>dbj|BAC65530.1| mKIAA0324 protein [Mus musculus]
Length = 1754
Score = 37.7 bits (86), Expect = 0.090
Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +2
Query: 245 RASWNTPAVPRCRSRHR-PGQRKVDTAKPPL--RRSCSSTCGRWCTSSMSRS*PA--RS* 409
R+ TP V R RSR R P +R+ + PP+ RRS S T S SR+ P R
Sbjct: 926 RSRSRTPPVTRRRSRSRTPTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRS 985
Query: 410 RPRTKP*CGAQRM*RLASTATRRRIRARVTYTPRRSS 520
R RT P +R S TRRR R+R + RR S
Sbjct: 986 RSRTSP-VTRRRSRSRTSPVTRRRSRSRTSPVTRRRS 1021
>ref|NP_780438.1| RIKEN cDNA 5033413A03 [Mus musculus] gi|26354955|dbj|BAC41104.1|
unnamed protein product [Mus musculus]
Length = 2607
Score = 37.7 bits (86), Expect = 0.090
Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +2
Query: 245 RASWNTPAVPRCRSRHR-PGQRKVDTAKPPL--RRSCSSTCGRWCTSSMSRS*PA--RS* 409
R+ TP V R RSR R P +R+ + PP+ RRS S T S SR+ P R
Sbjct: 1779 RSRSRTPPVTRRRSRSRTPTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRS 1838
Query: 410 RPRTKP*CGAQRM*RLASTATRRRIRARVTYTPRRSS 520
R RT P +R S TRRR R+R + RR S
Sbjct: 1839 RSRTSP-VTRRRSRSRTSPVTRRRSRSRTSPVTRRRS 1874
Score = 33.5 bits (75), Expect = 1.7
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 245 RASWNTPAVPRCRSRHR-PGQRKVDTAKPPLRRSCSSTCGRWCTSSMSRS*PARS*RPRT 421
R+ TPA R RSR R P +R+ T P RRS S + R S SR+ RS R R+
Sbjct: 504 RSRSRTPA-RRGRSRSRTPTRRRSRTRSPVRRRSRSRSQARRSGRSRSRTPARRSGRSRS 562
Query: 422 KP*CGAQRM*RLASTATRRRIRARVTYTPRRSSS 523
+ A+R + T RR R+R RR S
Sbjct: 563 R--TPARRGRSRSRTPARRSARSRSRTPARRGRS 594
