Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002842A_C01 KCC002842A_c01
(629 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_824631.1| hypothetical protein [Streptomyces avermitilis ... 70 3e-11
gb|AAK43480.1|AC084807_5 hypothetical protein [Arabidopsis thali... 63 3e-09
ref|NP_500520.1| abnormal RAy Morphology RAM-4, COLlagen structu... 44 8e-08
pir||JC4749 gEgh7 protein - grass mildew gi|727157|gb|AAB05212.1... 57 3e-07
gb|EAA18034.1| immediate early protein homolog [Plasmodium yoeli... 55 8e-07
>ref|NP_824631.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29607107|dbj|BAC71166.1| hypothetical protein
[Streptomyces avermitilis MA-4680]
Length = 394
Score = 69.7 bits (169), Expect = 3e-11
Identities = 53/130 (40%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Frame = +3
Query: 111 TRQRASACVLQRASSKQPRR--------VTARA-GFEETLAEAALGF--------GDAAQ 239
T RA+A RA++ P R VT A + + A+G GD A
Sbjct: 148 TPSRANAATPSRANAGTPSRANVGPVADVTKTAPAVQRVVRPVAVGLAGGVVRPVGDLAD 207
Query: 240 GLVDAAADFSLGDFVPAIPSMPSLPSMPSLPSVPSLPSLPSVPSLPSGLPGVSLVPSLPS 419
+ D AD S VP+ PS PS PS PSLP +PSLP+LP PSLP GLPG+S LP+
Sbjct: 208 TVADGLADASSQVPVPSFPSPPSPPSPPSLPPLPSLPALPEPPSLP-GLPGLS---GLPT 263
Query: 420 IPVEVTQATA 449
PV+ A A
Sbjct: 264 SPVQTLPAPA 273
>gb|AAK43480.1|AC084807_5 hypothetical protein [Arabidopsis thaliana]
Length = 220
Score = 63.2 bits (152), Expect = 3e-09
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 11/86 (12%)
Frame = +3
Query: 201 LAEAALGFGDAAQGLVDAAADFSLGDFVPAIPSMPSLPSMPSLPSVPSLPSLPSVPSLPS 380
L ++ +G+G ++ L D+ A S +P PS+P LP++P +P +PSLP++PS+P++P
Sbjct: 40 LGDSKIGWGTSS--LSDSKAPLSPPVLLPGFPSIPWLPNIPGIPIIPSLPNIPSLPTIPE 97
Query: 381 -----------GLPGVSLVPSLPSIP 425
GLP + +P+LPSIP
Sbjct: 98 IPNIPRIPNIPGLPNIPGLPNLPSIP 123
Score = 61.6 bits (148), Expect = 9e-09
Identities = 22/48 (45%), Positives = 40/48 (82%)
Frame = +3
Query: 282 VPAIPSMPSLPSMPSLPSVPSLPSLPSVPSLPSGLPGVSLVPSLPSIP 425
+P IPS+P++PS+P++P +P++P +P++P LP+ +PG+ +PS+P IP
Sbjct: 80 IPIIPSLPNIPSLPTIPEIPNIPRIPNIPGLPN-IPGLPNLPSIPRIP 126
Score = 46.2 bits (108), Expect = 4e-04
Identities = 15/32 (46%), Positives = 26/32 (80%)
Frame = +3
Query: 282 VPAIPSMPSLPSMPSLPSVPSLPSLPSVPSLP 377
+P IP +P++P +P++P +P+LPS+P +P LP
Sbjct: 98 IPNIPRIPNIPGLPNIPGLPNLPSIPRIPGLP 129
Score = 46.2 bits (108), Expect = 4e-04
Identities = 16/32 (50%), Positives = 26/32 (81%)
Frame = +3
Query: 282 VPAIPSMPSLPSMPSLPSVPSLPSLPSVPSLP 377
+P IP++P LP++P LP++PS+P +P +P LP
Sbjct: 101 IPRIPNIPGLPNIPGLPNLPSIPRIPGLPPLP 132
Score = 43.1 bits (100), Expect = 0.003
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +3
Query: 282 VPAIPSMPSLPSMPSLPSVPSLPSLPSVPSLPS 380
+P IP +P++P +P+LPS+P +P LP +P + S
Sbjct: 104 IPNIPGLPNIPGLPNLPSIPRIPGLPPLPWVKS 136
>ref|NP_500520.1| abnormal RAy Morphology RAM-4, COLlagen structural gene (29.3 kD)
(ram-4) [Caenorhabditis elegans]
gi|22096342|sp|P34687|CC34_CAEEL Cuticle collagen 34
(Abnormal ray morphology protein 4)
gi|7500590|pir||T29956 hypothetical protein F36A4.10 -
Caenorhabditis elegans gi|1255802|gb|AAA96155.1|
Collagen protein 34 [Caenorhabditis elegans]
gi|18643096|gb|AAL76233.1|AF410845_1 cuticular collagen
RAM-4 [Caenorhabditis elegans]
Length = 299
Score = 43.5 bits (101), Expect(2) = 8e-08
Identities = 22/51 (43%), Positives = 25/51 (48%)
Frame = -2
Query: 424 GMEGRLGTNETPGSPEGRDGTDGREGSEGTEGSEGIDGREGMDGMAGTKSP 272
G G G PGSP G+ G DG G G +G G DG+ G DG G P
Sbjct: 219 GPPGEAGPQGPPGSP-GQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGP 268
Score = 36.2 bits (82), Expect = 0.40
Identities = 25/76 (32%), Positives = 28/76 (35%), Gaps = 9/76 (11%)
Frame = -2
Query: 424 GMEGRLGTNETPGSPE-------GRDGTDGREGSEGTEGSEGIDGREGMDGMAGTKSPR- 269
G G GT PG P G G G G +G GS G G +G G G K P
Sbjct: 193 GAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNG 252
Query: 268 -EKSAAASTRPCAASP 224
+ A P A P
Sbjct: 253 PDGQPGADGNPGAPGP 268
Score = 35.8 bits (81), Expect = 0.52
Identities = 18/49 (36%), Positives = 27/49 (54%), Gaps = 2/49 (4%)
Frame = -2
Query: 424 GMEGRLGTNETPGSP--EGRDGTDGREGSEGTEGSEGIDGREGMDGMAG 284
G G+ G + +PG P +G +G DG+ G++G G+ G G G G G
Sbjct: 231 GSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAGPPGSPGERG 279
Score = 34.7 bits (78), Expect(2) = 8e-08
Identities = 25/68 (36%), Positives = 26/68 (37%), Gaps = 5/68 (7%)
Frame = -3
Query: 612 PCWPIPRGSPARKTPAAPP----PPGRPG-SAQTARPASG*PARRPQPQRTWRRDGQP*T 448
PC P P+G P P PP PG PG Q A P P P P G P
Sbjct: 144 PCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTP-- 201
Query: 447 RSPG*PPQ 424
PG P Q
Sbjct: 202 GEPGVPAQ 209
Score = 33.1 bits (74), Expect(2) = 0.026
Identities = 15/40 (37%), Positives = 18/40 (44%)
Frame = -2
Query: 391 PGSPEGRDGTDGREGSEGTEGSEGIDGREGMDGMAGTKSP 272
P P G G G G G GS G+ G++ G G K P
Sbjct: 149 PQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGP 188
Score = 26.2 bits (56), Expect(2) = 0.026
Identities = 18/43 (41%), Positives = 19/43 (43%)
Frame = -3
Query: 615 SPCWPIPRGSPARKTPAAPPPPGRPGSAQTARPASG*PARRPQ 487
S C P P G TP P PG+PG A G P R PQ
Sbjct: 98 SCCLPGPPGPAG--TPGKPGRPGKPG----APGLPGNPGRPPQ 134
>pir||JC4749 gEgh7 protein - grass mildew gi|727157|gb|AAB05212.1| gEgh7
[Blumeria graminis]
Length = 249
Score = 56.6 bits (135), Expect = 3e-07
Identities = 21/48 (43%), Positives = 35/48 (72%)
Frame = +3
Query: 282 VPAIPSMPSLPSMPSLPSVPSLPSLPSVPSLPSGLPGVSLVPSLPSIP 425
+PAIPS+P +P++P +P +P++P +P VP +P +P V VP +P +P
Sbjct: 88 IPAIPSIPEIPAIPDIPKIPAIPDVPEVPDVPE-VPDVPEVPEVPDVP 134
Score = 51.6 bits (122), Expect = 9e-06
Identities = 19/46 (41%), Positives = 34/46 (73%)
Frame = +3
Query: 288 AIPSMPSLPSMPSLPSVPSLPSLPSVPSLPSGLPGVSLVPSLPSIP 425
+IP++PS+P +P++P +P +P++P VP +P +P V VP +P +P
Sbjct: 87 SIPAIPSIPEIPAIPDIPKIPAIPDVPEVPD-VPEVPDVPEVPEVP 131
Score = 46.6 bits (109), Expect = 3e-04
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +3
Query: 282 VPAIPSMPSLPSMPSLPSVPSLPSLPSVPSLPSGLPGVSLVPSLPS 419
+P IP++P +P +P +P VP +P +P VP +P G V P+ S
Sbjct: 103 IPKIPAIPDVPEVPDVPEVPDVPEVPEVPDVPEGDDSVEPPPAYDS 148
Score = 45.1 bits (105), Expect = 9e-04
Identities = 20/72 (27%), Positives = 40/72 (54%), Gaps = 24/72 (33%)
Frame = +3
Query: 282 VPAIPSMPSLPSMP--------------SLPSVPSLPSLPSVPSLPS----------GLP 389
VPAIP++P++P +P ++P++P++P++P VP +P+ +P
Sbjct: 30 VPAIPNIPAVPDVPDVPATSKLVKRESINIPAIPNVPAVPKVPDVPATSRAVKDRSISIP 89
Query: 390 GVSLVPSLPSIP 425
+ +P +P+IP
Sbjct: 90 AIPSIPEIPAIP 101
Score = 35.4 bits (80), Expect = 0.68
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 16/93 (17%)
Frame = +3
Query: 288 AIPSMPSLPSMPSLPSVPSLPSLPSVPSLPS----------------GLPGVSLVPSLPS 419
AIP + L S+ +VP++P++P+VP +P +P V VP +P
Sbjct: 18 AIPLLSGLESI----NVPAIPNIPAVPDVPDVPATSKLVKRESINIPAIPNVPAVPKVPD 73
Query: 420 IPVEVTQATAFMVDHPVATFAAAVGAVLVIPKL 518
+P + P + A+ IPK+
Sbjct: 74 VPATSRAVKDRSISIPAIPSIPEIPAIPDIPKI 106
>gb|EAA18034.1| immediate early protein homolog [Plasmodium yoelii yoelii]
Length = 802
Score = 55.1 bits (131), Expect = 8e-07
Identities = 19/49 (38%), Positives = 34/49 (68%)
Frame = +3
Query: 282 VPAIPSMPSLPSMPSLPSVPSLPSLPSVPSLPSGLPGVSLVPSLPSIPV 428
+P +P MP +P MP +P +P +P +P +P +P G+PG+ +P +P +P+
Sbjct: 583 MPGMPGMPGMPGMPGMPGMPGMPGMPRMPGMP-GMPGMPGMPGMPGMPM 630
