Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002828A_C01 KCC002828A_c01
(533 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC56001.1| P0705A05.19 [Oryza sativa (japonica cultivar-gro... 40 0.015
ref|NP_189071.1| hypothetical protein [Arabidopsis thaliana] 39 0.033
dbj|BAB02927.1| gene_id:K7M2.4~unknown protein [Arabidopsis thal... 39 0.033
ref|NP_870028.1| hypothetical protein-signal peptide prediction ... 37 0.16
ref|ZP_00088225.1| COG3712: Fe2+-dicitrate sensor, membrane comp... 37 0.21
>dbj|BAC56001.1| P0705A05.19 [Oryza sativa (japonica cultivar-group)]
Length = 121
Score = 40.4 bits (93), Expect = 0.015
Identities = 23/71 (32%), Positives = 35/71 (48%)
Frame = +1
Query: 127 RVADMQPKGQSQGQSQSQSQVKQQGLADPDLDLADFDDADAGFDAPPQFQEKLLDADFFN 306
RV +M G S +++ + + + + + D AD D P +DADFFN
Sbjct: 54 RVIEMSSPGGVNEWEDSPGEMESEAASAVGMGMMEVD-AD---DRHPPSSSLPIDADFFN 109
Query: 307 QFPDDFDESDM 339
FPDDFD+ D+
Sbjct: 110 SFPDDFDDQDL 120
>ref|NP_189071.1| hypothetical protein [Arabidopsis thaliana]
Length = 78
Score = 39.3 bits (90), Expect = 0.033
Identities = 20/44 (45%), Positives = 27/44 (60%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 DLDLADFDDADAGFDAP--PQFQEKLLDADFFNQFPDDFDESDM 339
++D DF D F+ FQ K D+DFFN+F DDFD+SD+
Sbjct: 34 EIDEDDFGPMDMQFEVGGISPFQMKPEDSDFFNKFEDDFDDSDI 77
>dbj|BAB02927.1| gene_id:K7M2.4~unknown protein [Arabidopsis thaliana]
Length = 69
Score = 39.3 bits (90), Expect = 0.033
Identities = 20/44 (45%), Positives = 27/44 (60%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 DLDLADFDDADAGFDAP--PQFQEKLLDADFFNQFPDDFDESDM 339
++D DF D F+ FQ K D+DFFN+F DDFD+SD+
Sbjct: 25 EIDEDDFGPMDMQFEVGGISPFQMKPEDSDFFNKFEDDFDDSDI 68
>ref|NP_870028.1| hypothetical protein-signal peptide prediction [Pirellula sp.]
gi|32447582|emb|CAD79181.1| hypothetical protein-signal
peptide prediction [Pirellula sp.]
Length = 669
Score = 37.0 bits (84), Expect = 0.16
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -1
Query: 290 SRSFSWN*GGASKPASASSKSARSK--SGSASPCCLTWLWLCDW 165
S S S + G+ +P+ + S S+ SGS+ PC TW+W C W
Sbjct: 597 SESASDSSDGSDRPSESDSTEEPSEDSSGSSEPCNSTWIWSCGW 640
>ref|ZP_00088225.1| COG3712: Fe2+-dicitrate sensor, membrane component [Pseudomonas
fluorescens PfO-1]
Length = 333
Score = 36.6 bits (83), Expect = 0.21
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 384 RARPAELMPL*AAAAAWRRLVAPRNVCTQ*MADSGWRGWSKGLL 515
R PA ++P+ A++WRR +VC + + W GW+ G L
Sbjct: 67 RPEPAPVVPIRQPASSWRRYAVAASVCALALPLAAWAGWNLGWL 110
