Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002822A_C01 KCC002822A_c01
(534 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_680212.1| 50S ribosomal protein L24, chloroplast precurso... 91 1e-17
ref|NP_221012.1| 50S RIBOSOMAL PROTEIN L24 (rplX) [Rickettsia pr... 68 9e-11
ref|NP_811628.1| 50S ribosomal protein L24 [Bacteroides thetaiot... 66 3e-10
ref|NP_360632.1| 50S ribosomal protein L24 [Rickettsia conorii] ... 65 7e-10
ref|ZP_00058068.1| COG0198: Ribosomal protein L24 [Thermobifida ... 64 9e-10
>ref|NP_680212.1| 50S ribosomal protein L24, chloroplast precursor -related
[Arabidopsis thaliana] gi|8809706|dbj|BAA97247.1| 50S
ribosomal protein L24 [Arabidopsis thaliana]
Length = 159
Score = 90.5 bits (223), Expect = 1e-17
Identities = 55/128 (42%), Positives = 74/128 (56%), Gaps = 9/128 (7%)
Frame = +3
Query: 174 WRICRDDLVYILSGPDKGKTGKVLEIIKDTRTPQVIVEGRNLRKKKVKTGTGPD-DFFVV 350
W+I R D V I+ G DKG+TG + +I+ +VIVEG+NL KK +K G PD + +
Sbjct: 13 WKILRGDNVMIIRGKDKGETGTIKRVIRSQN--RVIVEGKNLIKKHIKGG--PDHEGGIF 68
Query: 351 TMEAHLHYSQVQLVDPQTGKPMRVIFAYTADGTKVRSRK--------VPKPSTADIIATP 506
T+EA LH S VQ+VDP TG+P +V Y DGTKVR + +P+P I ATP
Sbjct: 69 TVEAPLHASNVQVVDPVTGRPCKVGVKYLEDGTKVRVARGTGTSGSIIPRPEILKIRATP 128
Query: 507 SEEDPDPR 530
P+
Sbjct: 129 RPTTAGPK 136
>ref|NP_221012.1| 50S RIBOSOMAL PROTEIN L24 (rplX) [Rickettsia prowazekii]
gi|6225984|sp|Q9ZCR6|RL24_RICPR 50S ribosomal protein
L24 gi|7441018|pir||F71670 ribosomal protein L24 -
Rickettsia prowazekii gi|3861188|emb|CAA15088.1| 50S
RIBOSOMAL PROTEIN L24 (rplX) [Rickettsia prowazekii]
Length = 113
Score = 67.8 bits (164), Expect = 9e-11
Identities = 37/97 (38%), Positives = 57/97 (58%)
Frame = +3
Query: 177 RICRDDLVYILSGPDKGKTGKVLEIIKDTRTPQVIVEGRNLRKKKVKTGTGPDDFFVVTM 356
++ + D V I++G KGK GKVL++ + T V+V G NL KK K + ++T
Sbjct: 5 KVKKGDEVVIITGKYKGKKGKVLKVFPEENT--VVVSGVNLVKKHTKPNKMSEGG-IITQ 61
Query: 357 EAHLHYSQVQLVDPQTGKPMRVIFAYTADGTKVRSRK 467
E+ +H S + +DP+TG P +V F + DG+KVR K
Sbjct: 62 ESPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAK 98
>ref|NP_811628.1| 50S ribosomal protein L24 [Bacteroides thetaiotaomicron VPI-5482]
gi|29340028|gb|AAO77822.1| 50S ribosomal protein L24
[Bacteroides thetaiotaomicron VPI-5482]
Length = 105
Score = 65.9 bits (159), Expect = 3e-10
Identities = 37/100 (37%), Positives = 57/100 (57%)
Frame = +3
Query: 168 NRWRICRDDLVYILSGPDKGKTGKVLEIIKDTRTPQVIVEGRNLRKKKVKTGTGPDDFFV 347
++ I + D VY+ +G DKGKTG+VL+++ + + IVEG N+ K K +
Sbjct: 2 SKLHIKKGDTVYVNAGEDKGKTGRVLKVL--VKEGRAIVEGINMVSKSTKPNAKNPQGGI 59
Query: 348 VTMEAHLHYSQVQLVDPQTGKPMRVIFAYTADGTKVRSRK 467
V EA +H S + VDP+TGK R+ +++GT VR K
Sbjct: 60 VKQEASIHISNLNPVDPKTGKATRIGRRKSSEGTLVRYSK 99
>ref|NP_360632.1| 50S ribosomal protein L24 [Rickettsia conorii]
gi|34581380|ref|ZP_00142860.1| 50S ribosomal protein L24
[Rickettsia sibirica] gi|25295440|pir||C97824 50S
ribosomal protein L24 [imported] - Rickettsia conorii
(strain Malish 7) gi|15620109|gb|AAL03533.1| 50S
ribosomal protein L24 [Rickettsia conorii]
gi|28262765|gb|EAA26269.1| 50S ribosomal protein L24
[Rickettsia sibirica]
Length = 109
Score = 64.7 bits (156), Expect = 7e-10
Identities = 34/97 (35%), Positives = 57/97 (58%)
Frame = +3
Query: 177 RICRDDLVYILSGPDKGKTGKVLEIIKDTRTPQVIVEGRNLRKKKVKTGTGPDDFFVVTM 356
++ + D V +++G KGK GK+L++ + +VIV G N+ KK K+ + ++T
Sbjct: 5 KVKKGDEVVVITGKHKGKKGKILKVFPEDS--KVIVSGVNVVKKHTKSNQMSEGG-IITK 61
Query: 357 EAHLHYSQVQLVDPQTGKPMRVIFAYTADGTKVRSRK 467
E +H S + +DP+TG P +V F + DG+KVR K
Sbjct: 62 ELPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAK 98
>ref|ZP_00058068.1| COG0198: Ribosomal protein L24 [Thermobifida fusca]
Length = 101
Score = 64.3 bits (155), Expect = 9e-10
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +3
Query: 177 RICRDDLVYILSGPDKGKTGKVLEIIKDTRTPQVIVEGRNLRKKKVKTG-TGPDDFFVVT 353
+I + D V +++G DKG TGKV + + + +VIVEG NL KK K G VVT
Sbjct: 2 KIKKGDEVIVIAGKDKGATGKVKKAL--PKEQRVIVEGVNLIKKHKKANQAGGQQGEVVT 59
Query: 354 MEAHLHYSQVQLVDPQTGKPMRVIFAYTADGTKVR-SRKVPK 476
+EA +H S V L+ + G+P RV + + DGTKVR SR+ K
Sbjct: 60 LEAPIHVSNVALL--EDGRPTRVGYRFKEDGTKVRISRRTGK 99
