Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002812A_C01 KCC002812A_c01
(771 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF99794.1|AC012463_11 T2E6.21 [Arabidopsis thaliana] 53 5e-06
ref|NP_175203.2| expressed protein [Arabidopsis thaliana] gi|566... 53 5e-06
ref|NP_296139.1| DNA-binding response regulator [Deinococcus rad... 49 1e-04
ref|NP_568639.1| expressed protein [Arabidopsis thaliana] gi|264... 48 2e-04
gb|AAM61481.1| unknown [Arabidopsis thaliana] 48 2e-04
>gb|AAF99794.1|AC012463_11 T2E6.21 [Arabidopsis thaliana]
Length = 272
Score = 53.1 bits (126), Expect = 5e-06
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +3
Query: 27 WESLRANPEAWFDNRNNKQTPKSPDFRKKDDRTQALWVTSYGAPEWLNELLSELDAR 197
W+ +NP W+DNR NK+ PK PDF+ K D +ALW+ S P+W+ L D +
Sbjct: 200 WQVFFSNPYDWWDNRRNKKNPKQPDFKHK-DTGEALWLCS-DLPDWITRRLELFDQK 254
>ref|NP_175203.2| expressed protein [Arabidopsis thaliana]
gi|5668791|gb|AAD46017.1|AC007519_2 F16N3.2 [Arabidopsis
thaliana] gi|26453224|dbj|BAC43686.1| unknown protein
[Arabidopsis thaliana] gi|28950819|gb|AAO63333.1|
At1g47720 [Arabidopsis thaliana]
Length = 261
Score = 53.1 bits (126), Expect = 5e-06
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +3
Query: 27 WESLRANPEAWFDNRNNKQTPKSPDFRKKDDRTQALWVTSYGAPEWLNELLSELDAR 197
W+ +NP W+DNR NK+ PK PDF+ K D +ALW+ S P+W+ L D +
Sbjct: 189 WQVFFSNPYDWWDNRRNKKNPKQPDFKHK-DTGEALWLCS-DLPDWITRRLELFDQK 243
>ref|NP_296139.1| DNA-binding response regulator [Deinococcus radiodurans]
gi|7471835|pir||B75276 DNA-binding response regulator -
Deinococcus radiodurans (strain R1)
gi|6460240|gb|AAF11967.1|AE002072_9 DNA-binding response
regulator [Deinococcus radiodurans]
Length = 373
Score = 48.5 bits (114), Expect = 1e-04
Identities = 41/145 (28%), Positives = 55/145 (37%), Gaps = 10/145 (6%)
Frame = -1
Query: 429 PCETKAP-------PNAIVTANPKDPDEESTGSVVAICCTQLSHHLPARGRTPSVGRQTA 271
PC +AP P +I A+P P A+C T+ S S R
Sbjct: 218 PCAAEAPTFDWSCPPVSIPVASPSLPPGPILPPCCAVCRTRCSG---------SAARSAK 268
Query: 270 RPHASIPPLSSRLVCLRSTSSGRPGARPA-PTTAR*ATRARRSLSPTAPECGRPSCGSRG 94
A+ PP S CL++ + RP+ PT+ R R R SP P G
Sbjct: 269 NSSAATPPPGSSFRCLKALLPRQRAGRPSRPTSRRRCRRRRGRRSPARRAAAPPGAGRST 328
Query: 93 SW--ASACCCGCQTRPRGWPAGTPS 25
+ +AC CGC RP P + S
Sbjct: 329 PYPPRAACGCGCGARPPRLPPRSSS 353
>ref|NP_568639.1| expressed protein [Arabidopsis thaliana]
gi|26452626|dbj|BAC43396.1| unknown protein [Arabidopsis
thaliana] gi|28973013|gb|AAO63831.1| unknown protein
[Arabidopsis thaliana] gi|30102734|gb|AAP21285.1|
At5g44785 [Arabidopsis thaliana]
Length = 440
Score = 47.8 bits (112), Expect = 2e-04
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +3
Query: 27 WESLRANPEAWFDNRNNKQTPKSPDFRKKDDRTQALWVTSYGAPEWLNELLSELDARQ 200
W++L NP W+DNR +K+ PK PDF+ K + +ALW+ +P W L L Q
Sbjct: 380 WKNLVENPSKWWDNRLDKRNPKGPDFKHK-ETGEALWIGD--SPTWALSKLPPLKKNQ 434
Score = 47.0 bits (110), Expect = 3e-04
Identities = 23/59 (38%), Positives = 35/59 (58%)
Frame = +3
Query: 24 NWESLRANPEAWFDNRNNKQTPKSPDFRKKDDRTQALWVTSYGAPEWLNELLSELDARQ 200
+W+ L NP+ W DNR++K K PDF+ K + +ALW+T+ +P W+ L L Q
Sbjct: 293 SWKDLVQNPDKWLDNRSDKTNVKYPDFKHK-ETGEALWMTN--SPIWVLSKLPPLKKNQ 348
Score = 38.1 bits (87), Expect = 0.16
Identities = 22/59 (37%), Positives = 32/59 (53%), Gaps = 4/59 (6%)
Frame = +3
Query: 24 NWESLRANPEAWFDNRNNKQT----PKSPDFRKKDDRTQALWVTSYGAPEWLNELLSEL 188
+W+ L NP+ W D+R NK P PDF+ K +LW+++ AP+W L EL
Sbjct: 217 SWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGL-SLWLST--APDWALLKLEEL 272
>gb|AAM61481.1| unknown [Arabidopsis thaliana]
Length = 440
Score = 47.8 bits (112), Expect = 2e-04
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +3
Query: 27 WESLRANPEAWFDNRNNKQTPKSPDFRKKDDRTQALWVTSYGAPEWLNELLSELDARQ 200
W++L NP W+DNR +K+ PK PDF+ K + +ALW+ +P W L L Q
Sbjct: 380 WKNLVENPSKWWDNRLDKRNPKGPDFKHK-ETGEALWIGD--SPTWALSKLPPLKKNQ 434
Score = 47.0 bits (110), Expect = 3e-04
Identities = 23/59 (38%), Positives = 35/59 (58%)
Frame = +3
Query: 24 NWESLRANPEAWFDNRNNKQTPKSPDFRKKDDRTQALWVTSYGAPEWLNELLSELDARQ 200
+W+ L NP+ W DNR++K K PDF+ K + +ALW+T+ +P W+ L L Q
Sbjct: 293 SWKDLVQNPDKWLDNRSDKTNVKYPDFKHK-ETGEALWMTN--SPIWVLSKLPPLKKNQ 348
Score = 38.1 bits (87), Expect = 0.16
Identities = 22/59 (37%), Positives = 32/59 (53%), Gaps = 4/59 (6%)
Frame = +3
Query: 24 NWESLRANPEAWFDNRNNKQT----PKSPDFRKKDDRTQALWVTSYGAPEWLNELLSEL 188
+W+ L NP+ W D+R NK P PDF+ K +LW+++ AP+W L EL
Sbjct: 217 SWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGL-SLWLST--APDWALLKLEEL 272
