KCC002811A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002811A_C01 KCC002811A_c01
ACATGCTGGCCTAATCCAATTTACCGCTGCATCATGCTCGGTAGCCGAGCACTCGGGCTC
ATTTCCCAGTTTATGCACAAGCAGAACCCCGCAACAGCCGTAGGCATTCGCTTCATTTCG
GAAGAGCAGCTAGGAGCCAGCGCAGACCAGGTTGCTGACCTCTTTCAGCGGAACCTGCTG
AAAGCGAGTCGCAAGAAGCCTGACCAGCCTCCCCGCATCCTCACAACACGGCGAGAGGCG
ATATCGCTCTACAGGGAGATTTGGCGCTACAGCGTGCTGTTCCTGTGGCACGACGAGCGC
GGGCGCCTCTTCCGCGACGTCATCCGGACATCCGCCCGCGAGGAGTTTGAGGCGGCACGC
TTTGAGCCAGACCCGGAAATCATCAACAAGCTTATCATCACGGGGCGAGACTGCGTGCAG
CGCACCATGGAGGCCTTCGCAGCACGGGCCAAGCGGCTGGAAGCGGAGGGGCCGCAGCCA
CCACTACGGCAGTAGCAGCAGCAGCAGCGGCGTCGGCGTGCGATGTAACA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002811A_C01 KCC002811A_c01
         (530 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||H96788 protein T4O12.26 [imported] - Arabidopsis thaliana g...    95  6e-19
ref|NP_177733.2| expressed protein [Arabidopsis thaliana]              95  6e-19
gb|AAO22646.1| unknown protein [Arabidopsis thaliana]                  92  3e-18
gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]                       46  3e-04
pir||T46707 proteophosphoglycan, membrane-associated [imported] ...    46  3e-04

>pir||H96788 protein T4O12.26 [imported] - Arabidopsis thaliana
           gi|6721112|gb|AAF26766.1|AC007396_15 T4O12.26
           [Arabidopsis thaliana]
          Length = 179

 Score = 94.7 bits (234), Expect = 6e-19
 Identities = 49/112 (43%), Positives = 70/112 (61%), Gaps = 7/112 (6%)
 Frame = +1

Query: 145 DQVADLFQRNLLKASRKKPDQPP-------RILTTRREAISLYREIWRYSVLFLWHDERG 303
           D V +L +R+L K  +   D          R+ +TRREA+SLYR+I R +  F W D RG
Sbjct: 58  DTVEELLERHLAKKEKPIIDHDEAEFLNRRRLTSTRREALSLYRDILRATRFFTWIDSRG 117

Query: 304 RLFRDVIRTSAREEFEAARFEPDPEIINKLIITGRDCVQRTMEAFAARAKRL 459
            L+RDV+R +AR+EFEAARFE DPE+I +L+I G D V   ++  A + + +
Sbjct: 118 NLWRDVLRENARKEFEAARFETDPEVITRLLIGGSDAVSSALDKLAEKQREM 169

>ref|NP_177733.2| expressed protein [Arabidopsis thaliana]
          Length = 157

 Score = 94.7 bits (234), Expect = 6e-19
 Identities = 49/112 (43%), Positives = 70/112 (61%), Gaps = 7/112 (6%)
 Frame = +1

Query: 145 DQVADLFQRNLLKASRKKPDQPP-------RILTTRREAISLYREIWRYSVLFLWHDERG 303
           D V +L +R+L K  +   D          R+ +TRREA+SLYR+I R +  F W D RG
Sbjct: 36  DTVEELLERHLAKKEKPIIDHDEAEFLNRRRLTSTRREALSLYRDILRATRFFTWIDSRG 95

Query: 304 RLFRDVIRTSAREEFEAARFEPDPEIINKLIITGRDCVQRTMEAFAARAKRL 459
            L+RDV+R +AR+EFEAARFE DPE+I +L+I G D V   ++  A + + +
Sbjct: 96  NLWRDVLRENARKEFEAARFETDPEVITRLLIGGSDAVSSALDKLAEKQREM 147

>gb|AAO22646.1| unknown protein [Arabidopsis thaliana]
          Length = 157

 Score = 92.4 bits (228), Expect = 3e-18
 Identities = 48/112 (42%), Positives = 69/112 (60%), Gaps = 7/112 (6%)
 Frame = +1

Query: 145 DQVADLFQRNLLKASRKKPDQPP-------RILTTRREAISLYREIWRYSVLFLWHDERG 303
           D V +L +R+L K  +   D          R+ +TRREA+SLYR+I R +  F W D RG
Sbjct: 36  DTVEELLERHLAKKEKPIIDHDEAEFLNRRRLTSTRREALSLYRDILRATRFFTWIDSRG 95

Query: 304 RLFRDVIRTSAREEFEAARFEPDPEIINKLIITGRDCVQRTMEAFAARAKRL 459
            L+RDV+R +AR+EF AARFE DPE+I +L+I G D V   ++  A + + +
Sbjct: 96  NLWRDVLRENARKEFGAARFETDPEVITRLLIGGSDAVSSALDKLAGKQREM 147

>gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]
          Length = 1325

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 4/166 (2%)
 Frame = +2

Query: 23   TAASCSVAEHSGSFPSLCTSRTPQQ----P*AFASFRKSS*EPAQTRLLTSFSGTC*KRV 190
            +A+S S    S S PS  +S  P      P A +S   SS   A +   +S   +     
Sbjct: 824  SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP 883

Query: 191  ARSLTSLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHALSQ 370
            + S +S P+SS        S+    +++  +   +S+ A S++SS  P A S    + S 
Sbjct: 884  SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSS 943

Query: 371  TRKSSTSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
            +   S S SS   ++ SAP   S   PS       +    + SSSS
Sbjct: 944  SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 989

 Score = 45.4 bits (106), Expect = 4e-04
 Identities = 46/167 (27%), Positives = 69/167 (40%), Gaps = 5/167 (2%)
 Frame = +2

Query: 23   TAASCSVAEHSGSFPSLCTSRTPQQP*AFASFRKSS*EPAQTRLLTSFSGTC*KRVARSL 202
            +A+S S    S S PS  +S  P    + A    SS  P+ +    S S +         
Sbjct: 778  SASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS--------- 828

Query: 203  TSLPASSQHGERRYRSTGRFGATACCSCGTTSA-----GASSATSSGHPPARSLRRHALS 367
             S P+SS        S+    +++  S  ++SA      A SA+SS  P + S    A S
Sbjct: 829  -SAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASS 887

Query: 368  QTRKSSTSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
             +  SS+S S+   ++ SAP   S   PS       S    S+ S+S
Sbjct: 888  SSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSAS 934

 Score = 45.1 bits (105), Expect = 6e-04
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
 Frame = +2

Query: 23   TAASCSVAEHSGSFPSLCTSRTPQQ----P*AFASFRKSS*EPAQTRLLTSFSGTC*KRV 190
            +A+S S +  S S PS  +S  P      P A +S   SS   A +   +S   +     
Sbjct: 672  SASSSSASSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP 731

Query: 191  ARSLTSLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHALSQ 370
            + S +S P+SS        S+    +++  S  ++SA   S++SS  P A S    + S 
Sbjct: 732  SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSA--PSSSSSSAPSASSSSAPSSSS 789

Query: 371  TRKSSTSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
            +  S++S S+   ++ SAP   S   PS       +    + SSSS
Sbjct: 790  SAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 835

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 4/166 (2%)
 Frame = +2

Query: 23   TAASCSVAEHSGSFPSLCTSRTPQQ----P*AFASFRKSS*EPAQTRLLTSFSGTC*KRV 190
            +A+S S    S S PS  +S  P      P A +S   SS   A +   +S   +     
Sbjct: 809  SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP 868

Query: 191  ARSLTSLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHALSQ 370
            + S +S P+SS        S+    +++     ++S+  SS++SS    + S    + S 
Sbjct: 869  SASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSS 928

Query: 371  TRKSSTSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
            +  S++S S+   ++ SAP   S   PS       +    + SSSS
Sbjct: 929  SAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 974

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 49/168 (29%), Positives = 68/168 (40%), Gaps = 6/168 (3%)
 Frame = +2

Query: 23   TAASCSVAEHSGSFPSLCTSRTPQQ----P*AFASFRKSS*EPAQTRLLTSFSGTC*KRV 190
            +A+S S    S S PS  +S  P      P A +S   SS   A +   +S   +     
Sbjct: 687  SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP 746

Query: 191  ARSLTSLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSA--TSSGHPPARSLRRHAL 364
            + S +S P+SS        S     A +  S    SA +SSA  +SS  P A S    + 
Sbjct: 747  SASSSSAPSSSSSAP----SASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 802

Query: 365  SQTRKSSTSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
            S +   S S SS   ++ SAP   S   PS       +    + SSSS
Sbjct: 803  SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 850

 Score = 42.0 bits (97), Expect = 0.005
 Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
 Frame = +2

Query: 23   TAASCSVAEHSGSFPSLCTSRTPQQ----P*AFASFRKSS*EPAQTRLLTSF-SGTC*KR 187
            +A+S S    S S PS  +S  P      P A +S   SS   A +   +S  S +    
Sbjct: 839  SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSA 898

Query: 188  VARSLTSLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHALS 367
             + S +S P+SS        S+    +++  +   +S+ A S++SS  P A S    + S
Sbjct: 899  PSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSS 958

Query: 368  QTRKSSTSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
             +  S++S SS   ++ SAP   S   PS       S    S+ SSS
Sbjct: 959  SSAPSASS-SSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSS 1004

 Score = 41.2 bits (95), Expect = 0.008
 Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 4/166 (2%)
 Frame = +2

Query: 23   TAASCSVAEHSGSFPSLCTSRTPQQ----P*AFASFRKSS*EPAQTRLLTSFSGTC*KRV 190
            +A+S S    S S PS  +S  P      P A +S   SS   A +   +S   +     
Sbjct: 702  SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP 761

Query: 191  ARSLTSLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHALSQ 370
            + S +S P+SS        S+    +++     ++S+  SS++SS   P+ S      S 
Sbjct: 762  SASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSA--PSASSSSAPSSS 819

Query: 371  TRKSSTSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
            +   S S SS   ++ SAP   S   PS       +    + SSSS
Sbjct: 820  SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 865

 Score = 40.4 bits (93), Expect = 0.014
 Identities = 45/167 (26%), Positives = 69/167 (40%), Gaps = 6/167 (3%)
 Frame = +2

Query: 26   AASCSVAEHSGSFPSLCTSRTPQQP*AFASFRKSS*EPAQTRLLTSFSGTC*KRVARSLT 205
            ++S + +  S S PS  +S  P    + A    SS  P+ +    S S +     A S +
Sbjct: 918  SSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSS----APSSS 973

Query: 206  SLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHALSQTRKSS 385
            S   S+        S+    + +  S  ++S+ A SA+SS  P + S    A S +  SS
Sbjct: 974  SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 1033

Query: 386  TSL------SSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
            +S       SS   ++ SAP   S   PS       S    S+ SSS
Sbjct: 1034 SSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSS 1080

 Score = 40.0 bits (92), Expect = 0.019
 Identities = 42/162 (25%), Positives = 68/162 (41%)
 Frame = +2

Query: 23   TAASCSVAEHSGSFPSLCTSRTPQQP*AFASFRKSS*EPAQTRLLTSFSGTC*KRVARSL 202
            +A+S S    S S PS  +S  P    + A    SS  P         S +     + S 
Sbjct: 869  SASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAP---------SSSSSSAPSASS 919

Query: 203  TSLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHALSQTRKS 382
            +S P+SS        S+    +++  +   +S+ A S++SS  P A S    + S +  S
Sbjct: 920  SSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSA-PSASSSSAPSSSSSAPS 978

Query: 383  STSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
            ++S S+   ++ SAP   S   PS       +    + SSSS
Sbjct: 979  ASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 1020

 Score = 38.9 bits (89), Expect = 0.042
 Identities = 41/162 (25%), Positives = 68/162 (41%)
 Frame = +2

Query: 23   TAASCSVAEHSGSFPSLCTSRTPQQP*AFASFRKSS*EPAQTRLLTSFSGTC*KRVARSL 202
            +A+S S    S S PS  +S  P    +  S   SS   + +    S S +         
Sbjct: 948  SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSS--------- 998

Query: 203  TSLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHALSQTRKS 382
             S P+SS        S+    +++  S  ++SA +SS+++   P A S    + S +  S
Sbjct: 999  -SAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSA---PSASSSSAPSSSSSAPS 1054

Query: 383  STSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
            ++S S+   ++ SAP   S   PS       +    + SSSS
Sbjct: 1055 ASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 1096

 Score = 37.7 bits (86), Expect = 0.093
 Identities = 45/168 (26%), Positives = 69/168 (40%), Gaps = 6/168 (3%)
 Frame = +2

Query: 23   TAASCSVAEHSGSFPSLCTSRTPQQP*AFASFRKSS*EPAQTRLLTSFSGTC*------K 184
            +A+S S    S S PS  +S  P    + A    SS  P+ +    S S +         
Sbjct: 747  SASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSS 806

Query: 185  RVARSLTSLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHAL 364
              + S +S P+SS        S+    +++  S  ++SA  SS++S+   P+ S      
Sbjct: 807  APSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSA-PSSSSSA---PSASSSSAPS 862

Query: 365  SQTRKSSTSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
            S +   S S SS   ++ SAP   S   PS       S    S+ SSS
Sbjct: 863  SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSS 910

>pir||T46707 proteophosphoglycan, membrane-associated [imported] - Leishmania
           major (fragment) gi|5420389|emb|CAB46680.1|
           proteophosphoglycan [Leishmania major]
          Length = 383

 Score = 45.8 bits (107), Expect = 3e-04
 Identities = 44/162 (27%), Positives = 70/162 (43%)
 Frame = +2

Query: 23  TAASCSVAEHSGSFPSLCTSRTPQQP*AFASFRKSS*EPAQTRLLTSFSGTC*KRVARSL 202
           +A+S S    S S PS  +S  P    +  S   SS  P+ +    S S +       S 
Sbjct: 74  SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSS-APSSSSSAPSASSSS---APSSS 129

Query: 203 TSLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHALSQTRKS 382
           +S P++S        S+    A++  +  ++S+ A SA+SS  P + S    + S +   
Sbjct: 130 SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAP 189

Query: 383 STSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
           S+S S+   ++ SAP   S   PS       S    + SSSS
Sbjct: 190 SSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSSSS 231

 Score = 37.4 bits (85), Expect = 0.12
 Identities = 42/162 (25%), Positives = 62/162 (37%)
 Frame = +2

Query: 23  TAASCSVAEHSGSFPSLCTSRTPQQP*AFASFRKSS*EPAQTRLLTSFSGTC*KRVARSL 202
           +A+S S    S S PS  +S  P    +  S   SS   + +    S S +         
Sbjct: 12  SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSS--------- 62

Query: 203 TSLPASSQHGERRYRSTGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHALSQTRKS 382
            S P+SS        S     A +  S   +++ +S+ +SS   P+ S      S +   
Sbjct: 63  -SAPSSSSSSA---PSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP 118

Query: 383 STSLSSRGETACSAPWRPSQHGPSGWKRRGRSHHYGSSSSSS 508
           S S SS   ++ SAP   S   PS       S    S+ SSS
Sbjct: 119 SASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSS 160

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 37/147 (25%), Positives = 60/147 (40%)
 Frame = +2

Query: 68  SLCTSRTPQQP*AFASFRKSS*EPAQTRLLTSFSGTC*KRVARSLTSLPASSQHGERRYR 247
           S   S +   P A +S   SS   A +   +S   +     + S +S P+SS        
Sbjct: 1   SSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSAS 60

Query: 248 STGRFGATACCSCGTTSAGASSATSSGHPPARSLRRHALSQTRKSSTSLSSRGETACSAP 427
           S+    +++  +   +S+ A S++SS   P+ S      S +   S S SS   ++ SAP
Sbjct: 61  SSSAPSSSSSSAPSASSSSAPSSSSSA--PSASSSSAPSSSSSAPSASSSSAPSSSSSAP 118

Query: 428 WRPSQHGPSGWKRRGRSHHYGSSSSSS 508
              S   PS       +    + SSSS
Sbjct: 119 SASSSSAPSSSSSAPSASSSSAPSSSS 145



EST assemble image


clone accession position
1 MX251h05_r BP092272 1 581
2 LC014h10_r AV619915 105 560
3 LC017f04_r AV620104 107 635
4 LC057e12_r AV622997 109 582




Chlamydomonas reinhardtii
Kazusa DNA Research Institute