KCC002808A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002808A_C01 KCC002808A_c01
tTATAATGCTTTCTTCCAAGACCTTGAACCTTACGCTTGCACCAAAGTTCTCCAGCTTCC
GTCGAGGACTCGTGCTTCCGCGCCACTCGATTAAAGCAATGGCGACCCCCGTGACCACCA
TCTATGTCAAGGGCGACCCGGCCAAGAACAAGCTGCTGGACTGCCCCTTCTGCCACCGCG
TGCTACTGGCGTACGAGGCCAAGAAGCTACCCTACAAGATGGAGTACATTGACTTCGACA
ACAAGCCCGCCTGGCTGCTGGAGGCCAGCGGCGGCAAGGTTCCCGTGATCAAGGAGGGTC
CCGATGCGCCGTACATGCCTGACAGCGATGTCATTGTGGTGCACCTGGAGAAGCAGCACC
CCGAGCCCTCGCTGCAGTCCTCCGTGCCAGCAGAAATCGGCGCCAAACTGTTCCCCAACT
TCCGTGCCATCCTGATCGGCCCGGCGGCGGAGGTGGCCGACAAGGTGGCCGCGCTGGAGG
AGCAGCTGGCGGGCATGGATGACTACCTGAGGCAGCACGAGGCCCAGGCTCCGCTGTTCG
GCGGGCAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002808A_C01 KCC002808A_c01
         (549 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAN04048.1| dehydroascorbate reductase [Brassica juncea]           101  8e-21
gb|AAN04049.1| dehydroascorbate reductase [Brassica juncea]            99  4e-20
gb|AAL71857.1| dehydroascorbate reductase [Nicotiana tabacum]          97  1e-19
gb|AAG24945.1|AF195783_1 dehydroascorbate reductase [Spinacia ol...    96  4e-19
ref|NP_568336.1| dehydroascorbate reductase, putative [Arabidops...    95  7e-19

>gb|AAN04048.1| dehydroascorbate reductase [Brassica juncea]
          Length = 257

 Score =  101 bits (251), Expect = 8e-21
 Identities = 64/158 (40%), Positives = 89/158 (55%), Gaps = 7/158 (4%)
 Frame = +3

Query: 66  GLVLPRHSIK----AMATPVTTIYVKGD-PAKNKLLDCPFCHRVLLAYEAKKLPYKMEYI 230
           GL  PR +++    AMA     I VK      NKL DCPFC RVLL  E K +PY M+ +
Sbjct: 28  GLTKPRRTVRLGTVAMAAAPLEICVKASITTPNKLGDCPFCQRVLLTMEEKHVPYDMKMV 87

Query: 231 DFDNKPAWLLEASG-GKVPVIKEGPDAPYMPDSDVIVVHLEKQHPEPSLQS-SVPAEIGA 404
           D  NKP W L+ +  GKVPV+K   D  ++PDSDVI   LE ++PEP L +    A +G+
Sbjct: 88  DLSNKPEWFLKINAEGKVPVVKF--DEKWVPDSDVITHALEDKYPEPPLATPPEKASVGS 145

Query: 405 KLFPNFRAILIGPAAEVADKVAALEEQLAGMDDYLRQH 518
           K+F  F   L     +   +   L+E L+  +DYL+++
Sbjct: 146 KIFSTFIGFLKSKDPKDGTEQVLLDE-LSTFNDYLKEN 182

>gb|AAN04049.1| dehydroascorbate reductase [Brassica juncea]
          Length = 217

 Score = 99.0 bits (245), Expect = 4e-20
 Identities = 61/144 (42%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
 Frame = +3

Query: 96  AMATPVTTIYVKGD-PAKNKLLDCPFCHRVLLAYEAKKLPYKMEYIDFDNKPAWLLEASG 272
           AMA+    I VK      NKL DCPFC RVLL  E K +PY M+ +D  NKP W L+ S 
Sbjct: 2   AMASAPLEICVKASITTPNKLGDCPFCQRVLLTMEEKHVPYDMKMVDLSNKPEWFLKISA 61

Query: 273 -GKVPVIKEGPDAPYMPDSDVIVVHLEKQHPEPSLQS-SVPAEIGAKLFPNFRAILIGPA 446
            GKVPV+K   D  ++PDSDVI   LE ++PEP L +    A +G+K+F  F   L    
Sbjct: 62  EGKVPVVKF--DEKWVPDSDVITQSLEDKYPEPPLATPPEKASVGSKIFSTFIGFLKSKD 119

Query: 447 AEVADKVAALEEQLAGMDDYLRQH 518
           +    +   L+E L+  +DYL+++
Sbjct: 120 SGDGTEQVLLDE-LSTFNDYLKEN 142

>gb|AAL71857.1| dehydroascorbate reductase [Nicotiana tabacum]
          Length = 212

 Score = 97.4 bits (241), Expect = 1e-19
 Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 3/129 (2%)
 Frame = +3

Query: 141 AKNKLLDCPFCHRVLLAYEAKKLPYKMEYIDFDNKPAWLLEAS-GGKVPVIKEGPDAPYM 317
           A N L DCPF  R LL  E KK+PYKM  I+  +KP W LE +  GKVPVIK   D  ++
Sbjct: 13  APNVLGDCPFSQRALLTLEEKKVPYKMHLINVSDKPKWFLEVNPEGKVPVIKF--DEKWI 70

Query: 318 PDSDVIVVHLEKQHPEPSLQSSVP--AEIGAKLFPNFRAILIGPAAEVADKVAALEEQLA 491
           PDSDVIV  LE+++P PSL SS P  A +G+K+FP+F +      A    + A L+E L 
Sbjct: 71  PDSDVIVGLLEEKYPNPSL-SSPPEFASVGSKIFPSFVSFRKSKDASDGTEQALLDE-LK 128

Query: 492 GMDDYLRQH 518
            ++++L+ H
Sbjct: 129 ALEEHLKAH 137

>gb|AAG24945.1|AF195783_1 dehydroascorbate reductase [Spinacia oleracea]
          Length = 266

 Score = 95.5 bits (236), Expect = 4e-19
 Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
 Frame = +3

Query: 9   LSSKTLNLTLAPKFSSFRRG-LVLPRHSIKAMATPVTTIYVKGDPAK----------NKL 155
           LSS TL   L P     RR   +  +H        +T      DP +          NKL
Sbjct: 13  LSSSTLKRQLIPNPQFHRRNRTIFTQHFKNGTQRNLTVSMSSSDPLQICVKESVTTPNKL 72

Query: 156 LDCPFCHRVLLAYEAKKLPYKMEYIDFDNKPAWLLEAS-GGKVPVIKEGPDAPYMPDSDV 332
            DCPFC RVLL  E K LPY M+ +D  NKP W    +  GKVPV+K   D  ++ DSD+
Sbjct: 73  GDCPFCQRVLLTLEEKHLPYDMKLVDLSNKPEWFTNINPDGKVPVVKF--DENWVADSDI 130

Query: 333 IVVHLEKQHPEPSLQS-SVPAEIGAKLFPNFRAILIGPAAEVAD-KVAALEEQLAGMDDY 506
           I   LE+++P P L +    + +G+K+FP F   +   + + +D K   L  +L+  +DY
Sbjct: 131 IAKSLEERYPNPPLATPDEKSSVGSKIFPAFVGFI--KSKDPSDGKEQGLLNELSSFNDY 188

Query: 507 LRQHEAQAPLFGGQ 548
           L+++    P   G+
Sbjct: 189 LKEN---GPFINGE 199

>ref|NP_568336.1| dehydroascorbate reductase, putative [Arabidopsis thaliana]
           gi|21553744|gb|AAM62837.1| dehydroascorbate reductase
           [Arabidopsis thaliana] gi|26452229|dbj|BAC43202.1|
           putative dehydroascorbate reductase [Arabidopsis
           thaliana]
          Length = 258

 Score = 94.7 bits (234), Expect = 7e-19
 Identities = 62/183 (33%), Positives = 93/183 (49%), Gaps = 2/183 (1%)
 Frame = +3

Query: 6   MLSSKTLNLTLAPKFSSFRRGLVLPRHSIKAMATPVTTIYVKGDPAKNKLLDCPFCHRVL 185
           +LS+         +  S + G V    ++   A+P+           NKL DCPFC +VL
Sbjct: 14  VLSASVSRAGFIKRCGSTKPGRVGRFVTMATAASPLEICVKASITTPNKLGDCPFCQKVL 73

Query: 186 LAYEAKKLPYKMEYIDFDNKPAWLLEAS-GGKVPVIKEGPDAPYMPDSDVIVVHLEKQHP 362
           L  E K +PY M+ +D  NKP W L+ S  GKVPV+K   D  ++PDSDVI   LE+++P
Sbjct: 74  LTMEEKNVPYDMKMVDLSNKPEWFLKISPEGKVPVVKF--DEKWVPDSDVITQALEEKYP 131

Query: 363 EPSLQS-SVPAEIGAKLFPNFRAILIGPAAEVADKVAALEEQLAGMDDYLRQHEAQAPLF 539
           EP L +    A +G+K+F  F   L    +    +   L+E L   +DY++ +    P  
Sbjct: 132 EPPLATPPEKASVGSKIFSTFVGFLKSKDSGDGTEQVLLDE-LTTFNDYIKDN---GPFI 187

Query: 540 GGQ 548
            G+
Sbjct: 188 NGE 190



EST assemble image


clone accession position
1 MX253a02_r BP092347 1 501
2 LC014b10_r AV619861 2 525
3 LC019d01_r AV620233 17 523
4 LC082h06_r AV624797 44 550




Chlamydomonas reinhardtii
Kazusa DNA Research Institute