KCC002807A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002807A_C01 KCC002807A_c01
GGGACCAGACATGTTACACGCATTGCACAGGACCCATCCGATGGCCAAACCATAGCCTTA
AAGAGTTAAAGCCTACGGGACCCCGACCTACGCACAGCCACGCGAGAGCGCCGAACGCCC
ACGATGTGCCATCCGCAGCTCAACGCCACACAGCGCGCCCACACGACACAATCAAGTGTT
GGGGTTACGCCGCAAACACGCGACCACTCAGGCCGGCGTAGGACCGAAAAAATGGGCTCG
TGTTGCACAGAACCCGCGTGTATGACTAACAGTGGCCTGTTCCCAAAGCACACGCTGACA
TCACCACCCACCAAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002807A_C01 KCC002807A_c01
         (315 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P38898|YH17_YEAST Hypothetical 17.1 kDa protein in PUR5 3'reg...    37  0.097
pir||S28042 hemin receptor precursor - Yersinia enterocolitica         35  0.37
sp|P31499|HEMR_YEREN Hemin receptor precursor gi|3646475|emb|CAA...    35  0.37
ref|NP_044516.1| tegument protein [Human herpesvirus 2] gi|18698...    33  0.83
dbj|BAB79332.1| ORF3 [TT virus]                                        32  1.8

>sp|P38898|YH17_YEAST Hypothetical 17.1 kDa protein in PUR5 3'region
           gi|626712|pir||S48998 hypothetical protein YHR217c -
           yeast (Saccharomyces cerevisiae)
           gi|551324|gb|AAB69740.1| Yhr217cp [Saccharomyces
           cerevisiae]
          Length = 153

 Score = 36.6 bits (83), Expect = 0.097
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +3

Query: 15  YTHCTGPIRWPN-HSLKELKPTGPRPT-HSHARAPNAHDVPSAAQRHTARPHDTI 173
           Y H   P   P+ H+     P  P PT H H   P+ H  P+    HT  PH T+
Sbjct: 18  YIHTPHPHPHPHPHTPTHTHPHTPTPTPHPHPHTPHPHTTPTPTPHHTHTPHTTL 72

>pir||S28042 hemin receptor precursor - Yersinia enterocolitica
          Length = 686

 Score = 34.7 bits (78), Expect = 0.37
 Identities = 28/101 (27%), Positives = 42/101 (40%), Gaps = 3/101 (2%)
 Frame = +1

Query: 7   RHVTRIAQDPSDGQTIALKS*SL---RDPDLRTATRERRTPTMCHPQLNATQRAHTTQSS 177
           R+    A +P + QT A  S +L   R    R A  +     +    LNAT + + ++  
Sbjct: 257 RYYNNSALEPKNPQTSAASSTNLMTDRSTIQRDAQLKYNIKPLDQEWLNATAQVYYSEVE 316

Query: 178 VGVTPQTRDHSGRRRTEKMGSCCTEPACMTNSGLFPKHTLT 300
           +   PQ     GR++T K G         T+S  F  H LT
Sbjct: 317 INARPQGTPEEGRKQTTKGGKLENRTRLFTDS--FASHLLT 355

>sp|P31499|HEMR_YEREN Hemin receptor precursor gi|3646475|emb|CAA48250.1| hemR [Yersinia
           enterocolitica]
          Length = 687

 Score = 34.7 bits (78), Expect = 0.37
 Identities = 28/101 (27%), Positives = 42/101 (40%), Gaps = 3/101 (2%)
 Frame = +1

Query: 7   RHVTRIAQDPSDGQTIALKS*SL---RDPDLRTATRERRTPTMCHPQLNATQRAHTTQSS 177
           R+    A +P + QT A  S +L   R    R A  +     +    LNAT + + ++  
Sbjct: 257 RYYNNSALEPKNPQTSAASSTNLMTDRSTIQRDAQLKYNIKPLDQEWLNATAQVYYSEVE 316

Query: 178 VGVTPQTRDHSGRRRTEKMGSCCTEPACMTNSGLFPKHTLT 300
           +   PQ     GR++T K G         T+S  F  H LT
Sbjct: 317 INARPQGTPEEGRKQTTKGGKLENRTRLFTDS--FASHLLT 355

>ref|NP_044516.1| tegument protein [Human herpesvirus 2] gi|1869869|emb|CAB06732.1|
           tegument protein [Human herpesvirus 2]
          Length = 722

 Score = 33.5 bits (75), Expect = 0.83
 Identities = 24/67 (35%), Positives = 27/67 (39%), Gaps = 1/67 (1%)
 Frame = +3

Query: 9   TCYTHCTG-PIRWPNHSLKELKPTGPRPTHSHARAPNAHDVPSAAQRHTARPHDTIKCWG 185
           T YTH  G P R P        P  P P       P A   P AAQR  A  +D ++ WG
Sbjct: 500 TYYTHMAGAPPRLP--------PRNPAPPEQR---PAAAARPLAAQREAAGVYDAVRTWG 548

Query: 186 YAANTRP 206
             A   P
Sbjct: 549 PDAEAEP 555

>dbj|BAB79332.1| ORF3 [TT virus]
          Length = 277

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 21/89 (23%), Positives = 42/89 (46%)
 Frame = +1

Query: 7   RHVTRIAQDPSDGQTIALKS*SLRDPDLRTATRERRTPTMCHPQLNATQRAHTTQSSVGV 186
           R V +  Q+ +   T+  ++ S +DPD + +T+E + P    P L +    H+ +S    
Sbjct: 149 RRVLKECQNTNRLMTLFQQASSSKDPDWKPSTKEPKKPQKKTPTLYS---KHSKKSKRAA 205

Query: 187 TPQTRDHSGRRRTEKMGSCCTEPACMTNS 273
             +   H   +R++K  S  +  +  +NS
Sbjct: 206 ARKKNSHKKSKRSKKHNSSSSSNSSSSNS 234



EST assemble image


clone accession position
1 LC014a01_r AV619845 1 429
2 LCL069h03_r AV629953 53 253
3 LCL032e05_r AV627821 115 246




Chlamydomonas reinhardtii
Kazusa DNA Research Institute