KCC002803A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002803A_C01 KCC002803A_c01
gcatcgagtacggcgacatgcagctcatcagcgaggcctacgacgtgctgaagacgctgg
gcggcctcaacaacgaggagCTGGCGGCGGTGTTCAAGGAGTGGAATGACGCCGAGCTCA
AGTCATTCCTGGTGGAGATCACGGCCATCATTGTGAACAAGAAGGACGACCAGGCGCCCG
GATATCTGGTGGACCAGATTGTGGACCAGACCGGCTCCAAGGGCACAGGCAAGTGGACGG
TGCAGCAGGCGGCTGAGCTGGCGGTGGCGGCGCCCACCATGGCCTCGGCACTGGACGCGC
GCTACATGAGTGCGCTCAAGTCGGAGCGCGTGGCCGCCTCCAAGTCGTTCACAAGCTGTG
TCACGCCCGGCCCTGTTGCGGGTGTGGACAAGGCGCAGCTGATCAACGACGTGCGCGCGG
CGCTGTACGCCAGCAAGATCTGCTCGTACGCGCAGGGCATGAACATTATCAAGGCCAAGA
GCGTGGAGATGAAGTGGAACGTCGACCTGGGCGGCCTGGCGCGCATCTGGAAGGGTGGCT
GCATCATCCGCGCGCAGTTCCTGGACCGCATCCGCGTCGCCTACGAGCGCAACCCCGAGC
TGCCCTCGCTGCTGGTGGACCCCGACTTCGCCAAGGAGCTCACCGCTGCCGAGGCGTCCT
GGCGCCGCGTGGCCGCGCTGTCCATCACGCACGGCGTGCCCATCCCCTCCATGACCTCCT
CCCTGGGCTACTTTGACACCTACCGCCGCGAGCGCCTGCCCGCCAACCTGGTGCAGGCGC
AGCGCGACTTCTTCGGCTCGCACACCTACCAGCGCTTCGACAAGGAGGGCTGGTACCACA
CCGTGTGGGACGAGACCTTCGGCTCCGCCGACTCCATCACCACCAGCGGCTACGTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002803A_C01 KCC002803A_c01
         (896 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL76323.1|AF394513_1 6-phosphogluconate dehydrogenase [Chlam...   595  e-169
pir||T05363 phosphogluconate dehydrogenase (decarboxylating) (EC...   382  e-105
gb|AAK49897.1|AF295670_1 plastidic 6-phosphogluconate dehydrogen...   381  e-104
ref|NP_176601.1| 6-phosphogluconate dehydrogenase -related [Arab...   378  e-104
ref|NP_198982.1| 6-phosphogluconate dehydrogenase [Arabidopsis t...   378  e-104

>gb|AAL76323.1|AF394513_1 6-phosphogluconate dehydrogenase [Chlamydomonas reinhardtii]
          Length = 490

 Score =  595 bits (1534), Expect = e-169
 Identities = 298/298 (100%), Positives = 298/298 (100%)
 Frame = +3

Query: 3    IEYGDMQLISEAYDVLKTLGGLNNEELAAVFKEWNDAELKSFLVEITAIIVNKKDDQAPG 182
            IEYGDMQLISEAYDVLKTLGGLNNEELAAVFKEWNDAELKSFLVEITAIIVNKKDDQAPG
Sbjct: 192  IEYGDMQLISEAYDVLKTLGGLNNEELAAVFKEWNDAELKSFLVEITAIIVNKKDDQAPG 251

Query: 183  YLVDQIVDQTGSKGTGKWTVQQAAELAVAAPTMASALDARYMSALKSERVAASKSFTSCV 362
            YLVDQIVDQTGSKGTGKWTVQQAAELAVAAPTMASALDARYMSALKSERVAASKSFTSCV
Sbjct: 252  YLVDQIVDQTGSKGTGKWTVQQAAELAVAAPTMASALDARYMSALKSERVAASKSFTSCV 311

Query: 363  TPGPVAGVDKAQLINDVRAALYASKICSYAQGMNIIKAKSVEMKWNVDLGGLARIWKGGC 542
            TPGPVAGVDKAQLINDVRAALYASKICSYAQGMNIIKAKSVEMKWNVDLGGLARIWKGGC
Sbjct: 312  TPGPVAGVDKAQLINDVRAALYASKICSYAQGMNIIKAKSVEMKWNVDLGGLARIWKGGC 371

Query: 543  IIRAQFLDRIRVAYERNPELPSLLVDPDFAKELTAAEASWRRVAALSITHGVPIPSMTSS 722
            IIRAQFLDRIRVAYERNPELPSLLVDPDFAKELTAAEASWRRVAALSITHGVPIPSMTSS
Sbjct: 372  IIRAQFLDRIRVAYERNPELPSLLVDPDFAKELTAAEASWRRVAALSITHGVPIPSMTSS 431

Query: 723  LGYFDTYRRERLPANLVQAQRDFFGSHTYQRFDKEGWYHTVWDETFGSADSITTSGYV 896
            LGYFDTYRRERLPANLVQAQRDFFGSHTYQRFDKEGWYHTVWDETFGSADSITTSGYV
Sbjct: 432  LGYFDTYRRERLPANLVQAQRDFFGSHTYQRFDKEGWYHTVWDETFGSADSITTSGYV 489

>pir||T05363 phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44) -
            soybean gi|2529229|dbj|BAA22812.1| 6-phosphogluconate
            dehydrogenase [Glycine max]
          Length = 511

 Score =  382 bits (980), Expect = e-105
 Identities = 189/284 (66%), Positives = 230/284 (80%), Gaps = 2/284 (0%)
 Frame = +3

Query: 3    IEYGDMQLISEAYDVLKTLGGLNNEELAAVFKEWNDAELKSFLVEITAIIVNKKDDQAPG 182
            IEYGDMQLI+EAYDVLK++G L+NEEL +VF EWN  EL SFL+EITA I   KDD+  G
Sbjct: 194  IEYGDMQLIAEAYDVLKSVGKLSNEELQSVFSEWNKGELLSFLIEITADIFGIKDDKGDG 253

Query: 183  YLVDQIVDQTGSKGTGKWTVQQAAELAVAAPTMASALDARYMSALKSERVAASKSFTSCV 362
            YLVD+++D+TG KGTGKWTVQQAAEL++AAPT+ ++LDAR++S LK ERV A+K F S  
Sbjct: 254  YLVDKVLDKTGMKGTGKWTVQQAAELSIAAPTIEASLDARFLSGLKEERVEAAKVFKSGG 313

Query: 363  TPGPVAG--VDKAQLINDVRAALYASKICSYAQGMNIIKAKSVEMKWNVDLGGLARIWKG 536
                V    VDK +LI+DVR ALYA+KICSYAQGMN+I+AKS+E  W++ LG LARIWKG
Sbjct: 314  IGDIVTDQHVDKQKLIDDVRKALYAAKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKG 373

Query: 537  GCIIRAQFLDRIRVAYERNPELPSLLVDPDFAKELTAAEASWRRVAALSITHGVPIPSMT 716
            GCIIRA FLDRI+ AYERNP L +LLVDP+FAKE+   +++WRRV  L+I  G+  P M+
Sbjct: 374  GCIIRAIFLDRIKQAYERNPNLANLLVDPEFAKEIIDYQSAWRRVVCLAINSGISTPGMS 433

Query: 717  SSLGYFDTYRRERLPANLVQAQRDFFGSHTYQRFDKEGWYHTVW 848
            +SL YFDTYRRERLPANLVQAQRD+FG+HTY+R D EG YHT W
Sbjct: 434  ASLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDIEGSYHTEW 477

>gb|AAK49897.1|AF295670_1 plastidic 6-phosphogluconate dehydrogenase [Spinacia oleracea]
          Length = 537

 Score =  381 bits (978), Expect = e-104
 Identities = 190/294 (64%), Positives = 230/294 (77%), Gaps = 4/294 (1%)
 Frame = +3

Query: 3    IEYGDMQLISEAYDVLKTLGGLNNEELAAVFKEWNDAELKSFLVEITAIIVNKKDDQAPG 182
            IEYGDMQLISEAYDVLK +GGL+NEEL  +F EWN +EL+SFLVEITA I   KDD A G
Sbjct: 236  IEYGDMQLISEAYDVLKNVGGLSNEELGQIFDEWNKSELESFLVEITADIFKVKDDLADG 295

Query: 183  YLVDQIVDQTGSKGTGKWTVQQAAELAVAAPTMASALDARYMSALKSERVAASKSFTSCV 362
             LVD+I+D+TG KGTGKWTVQQAAEL+VAAPT+A++LD RY+S LK ER  A+K   +  
Sbjct: 296  GLVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKEERENAAKILEAAG 355

Query: 363  TPGPV----AGVDKAQLINDVRAALYASKICSYAQGMNIIKAKSVEMKWNVDLGGLARIW 530
                V     GVDK +LI+DVR ALYASKICSYAQGMN+++AKS EM W+++LG LARIW
Sbjct: 356  MKEEVNAIRGGVDKKRLIDDVRQALYASKICSYAQGMNLLRAKSAEMGWDLNLGELARIW 415

Query: 531  KGGCIIRAQFLDRIRVAYERNPELPSLLVDPDFAKELTAAEASWRRVAALSITHGVPIPS 710
            KGGCIIRA FLD I+ AY+RNP L SL+VDP+FAKE+   +A+WRRV  L+++ G+  P 
Sbjct: 416  KGGCIIRAVFLDSIKQAYQRNPNLASLVVDPEFAKEMVQRQAAWRRVVGLAVSAGISTPG 475

Query: 711  MTSSLGYFDTYRRERLPANLVQAQRDFFGSHTYQRFDKEGWYHTVWDETFGSAD 872
            M +SL YFDTYRR RLPANLVQAQRD+FG+HTY+R D  G YHT W +    +D
Sbjct: 476  MCASLAYFDTYRRARLPANLVQAQRDYFGAHTYERVDLPGSYHTEWSKLARKSD 529

>ref|NP_176601.1| 6-phosphogluconate dehydrogenase -related [Arabidopsis thaliana]
            gi|6692095|gb|AAF24560.1|AC007764_2 F22C12.5 [Arabidopsis
            thaliana] gi|28416567|gb|AAO42814.1| At1g64190
            [Arabidopsis thaliana]
          Length = 487

 Score =  378 bits (971), Expect = e-104
 Identities = 184/286 (64%), Positives = 227/286 (79%), Gaps = 4/286 (1%)
 Frame = +3

Query: 3    IEYGDMQLISEAYDVLKTLGGLNNEELAAVFKEWNDAELKSFLVEITAIIVNKKDDQAPG 182
            IEYGDMQLISEAYDVLK +GGL+NEELA +F EWN  EL+SFLVEIT+ I   KD+   G
Sbjct: 194  IEYGDMQLISEAYDVLKNVGGLSNEELAEIFTEWNSGELESFLVEITSDIFRVKDEFGDG 253

Query: 183  YLVDQIVDQTGSKGTGKWTVQQAAELAVAAPTMASALDARYMSALKSERVAASKSFTSCV 362
             LVD+I+D+TG KGTGKWTVQQAAEL+VAAPT+A++LD RY+S LK ER  A+K      
Sbjct: 254  ELVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKDERENAAKVLREAG 313

Query: 363  TPGPV----AGVDKAQLINDVRAALYASKICSYAQGMNIIKAKSVEMKWNVDLGGLARIW 530
                +    +G+DK +L++DVR ALYASKICSYAQGMN+++AKS+E  WN++ G LARIW
Sbjct: 314  LKEEIGSASSGIDKKRLVDDVRQALYASKICSYAQGMNLLRAKSLEKSWNLNFGELARIW 373

Query: 531  KGGCIIRAQFLDRIRVAYERNPELPSLLVDPDFAKELTAAEASWRRVAALSITHGVPIPS 710
            KGGCIIRA FLDRI+ AY+RNP+L SL+VDP+FAKE+   +A+WRRV  L+++ G+  P 
Sbjct: 374  KGGCIIRAVFLDRIKKAYQRNPDLASLVVDPEFAKEMVQRQAAWRRVVGLAVSAGISTPG 433

Query: 711  MTSSLGYFDTYRRERLPANLVQAQRDFFGSHTYQRFDKEGWYHTVW 848
            M +SL YFDTYRR RLPANLVQAQRD FG+HTY+R D+ G YHT W
Sbjct: 434  MCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERTDRPGAYHTEW 479

>ref|NP_198982.1| 6-phosphogluconate dehydrogenase [Arabidopsis thaliana]
            gi|30693852|ref|NP_851113.1| 6-phosphogluconate
            dehydrogenase [Arabidopsis thaliana]
            gi|10178021|dbj|BAB11473.1| 6-phosphogluconate
            dehydrogenase [Arabidopsis thaliana]
            gi|21928135|gb|AAM78095.1| AT5g41670/MBK23_20
            [Arabidopsis thaliana] gi|25090301|gb|AAN72272.1|
            At5g41670/MBK23_20 [Arabidopsis thaliana]
          Length = 487

 Score =  378 bits (971), Expect = e-104
 Identities = 187/286 (65%), Positives = 226/286 (78%), Gaps = 4/286 (1%)
 Frame = +3

Query: 3    IEYGDMQLISEAYDVLKTLGGLNNEELAAVFKEWNDAELKSFLVEITAIIVNKKDDQAPG 182
            IEYGDMQLISEAYDVLK +GGL+N+ELA +F EWN  EL+SFLVEIT+ I   KDD   G
Sbjct: 194  IEYGDMQLISEAYDVLKNVGGLSNDELAEIFTEWNRGELESFLVEITSDIFRVKDDYGDG 253

Query: 183  YLVDQIVDQTGSKGTGKWTVQQAAELAVAAPTMASALDARYMSALKSERVAASKSFTSCV 362
             LVD+I+D+TG KGTGKWTVQQAAEL+VAAPT+A++LD RY+S LK ER  A+K      
Sbjct: 254  ELVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKDERENAAKVLEEAG 313

Query: 363  TPGPVA----GVDKAQLINDVRAALYASKICSYAQGMNIIKAKSVEMKWNVDLGGLARIW 530
                +     GVDK +LI+DVR ALYASKICSYAQGMN+++AKS+E  W+++LG +ARIW
Sbjct: 314  LKEDIGSASRGVDKKRLIDDVRQALYASKICSYAQGMNLLRAKSLEKGWDLNLGEMARIW 373

Query: 531  KGGCIIRAQFLDRIRVAYERNPELPSLLVDPDFAKELTAAEASWRRVAALSITHGVPIPS 710
            KGGCIIRA FLDRI+ AY+RNP L SL+VDPDFAKE+   +A+WRRV  L+I+ G+  P 
Sbjct: 374  KGGCIIRAVFLDRIKKAYQRNPNLASLVVDPDFAKEMVQRQAAWRRVVGLAISAGISTPG 433

Query: 711  MTSSLGYFDTYRRERLPANLVQAQRDFFGSHTYQRFDKEGWYHTVW 848
            M +SL YFDTYRR RLPANLVQAQRD FG+HTY+R D+ G YHT W
Sbjct: 434  MCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERTDRPGAYHTEW 479



EST assemble image


clone accession position
1 LC027c07_r AV620819 1 433
2 LC090d07_r AV625284 223 733
3 LC013b12_r AV619788 354 896
4 LC065b05_r AV623523 356 866




Chlamydomonas reinhardtii
Kazusa DNA Research Institute