Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002786A_C01 KCC002786A_c01
(468 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_625904.1| conserved hypothetical protein SCI41.12c [Strep... 34 0.73
ref|XP_301597.1| similar to Polyadenylate-binding protein 2 (Pol... 33 1.2
ref|XP_297722.2| hypothetical protein XP_297722 [Homo sapiens] 33 1.6
ref|XP_295552.2| hypothetical protein XP_295552 [Homo sapiens] 33 1.6
ref|XP_133186.3| similar to hypothetical protein FLJ14486 [Homo ... 33 1.6
>ref|NP_625904.1| conserved hypothetical protein SCI41.12c [Streptomyces coelicolor
A3(2)] gi|6119671|emb|CAB59482.1| conserved hypothetical
protein SCI41.12c [Streptomyces coelicolor A3(2)]
Length = 135
Score = 34.3 bits (77), Expect = 0.73
Identities = 20/72 (27%), Positives = 36/72 (49%)
Frame = -3
Query: 418 VAWHLPSTCGDPALKLLEASGGHDCLLSGDKPTGLRQVAPVVCSSRGHGLQVMNEDARVW 239
V+ +P++ GD + L+E +GG+ L++ L ++ V C GL + + AR+
Sbjct: 62 VSQEIPTSDGDMKMVLIEMNGGYFYLMAAGPNAYLAVLSDVRCEPGRMGLSMADLVARIG 121
Query: 238 PSTASPNGGGGR 203
P SP G+
Sbjct: 122 PHLTSPARRNGQ 133
>ref|XP_301597.1| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein
2) (PABP 2) [Homo sapiens]
Length = 187
Score = 33.5 bits (75), Expect = 1.2
Identities = 22/58 (37%), Positives = 26/58 (43%)
Frame = +1
Query: 229 QSRATPEHPHSSPEGHGRDYYKQPGLPA*GPWAYRRSKDNHDRPKPLKA*VPDPRTCL 402
Q RATP P SS R+ +P G W R H RP PL+ VP P + L
Sbjct: 51 QPRATPPPPRSSEAASRRNRIPRP-----GRWTLHR----HPRPSPLRVAVPRPWSSL 99
>ref|XP_297722.2| hypothetical protein XP_297722 [Homo sapiens]
Length = 432
Score = 33.1 bits (74), Expect = 1.6
Identities = 37/128 (28%), Positives = 46/128 (35%), Gaps = 7/128 (5%)
Frame = +1
Query: 67 TKRQKTRVQPLTLSY*PRGRTGSAP*HHYAAMQSSALCRRHNKLNSGPHLHWGLQSRATP 246
T++++ V P T SA + + S L RH L WGLQ +
Sbjct: 160 TRQRRAAVCPHPCYQPVSSGTDSASEYIKPPVPSGYLVHRHTHLPPQWDFLWGLQQGQSQ 219
Query: 247 EHPHSSPEGHGRDYYKQ-----PGL--PA*GPWAYRRSKDNHDRPKPLKA*VPDPRTCLE 405
+HP P Y K+ PGL PA G W RP PL A P T
Sbjct: 220 DHPPHPPHPPSARYLKRNMDGPPGLPTPATGLW----------RPLPLNA---TPHTAHA 266
Query: 406 GAKPRTTE 429
P T E
Sbjct: 267 LPAPPTAE 274
>ref|XP_295552.2| hypothetical protein XP_295552 [Homo sapiens]
Length = 2103
Score = 33.1 bits (74), Expect = 1.6
Identities = 22/80 (27%), Positives = 33/80 (40%), Gaps = 16/80 (20%)
Frame = +1
Query: 184 RHNKLNSGPHLHWGLQSRATPEH---------------PHS-SPEGHGRDYYKQPGLPA* 315
R ++L + H H G + P H PH S GHGR + +P
Sbjct: 1433 RRDQLCATAHPHAGSRGLGRPSHTQRAFSRQGPPQQICPHGHSGAGHGRSFPWRPRRAVS 1492
Query: 316 GPWAYRRSKDNHDRPKPLKA 375
PWA +++D RP L++
Sbjct: 1493 RPWAAEKAQDGTSRPLSLRS 1512
Score = 33.1 bits (74), Expect = 1.6
Identities = 22/80 (27%), Positives = 33/80 (40%), Gaps = 16/80 (20%)
Frame = +1
Query: 184 RHNKLNSGPHLHWGLQSRATPEH---------------PHS-SPEGHGRDYYKQPGLPA* 315
R ++L + H H G + P H PH S GHGR + +P
Sbjct: 399 RRDQLCATAHPHAGSRGLGRPSHTQRAFSRQGPPQQICPHGHSGAGHGRSFPWRPRRAVS 458
Query: 316 GPWAYRRSKDNHDRPKPLKA 375
PWA +++D RP L++
Sbjct: 459 RPWAAEKAQDGTSRPLSLRS 478
>ref|XP_133186.3| similar to hypothetical protein FLJ14486 [Homo sapiens] [Mus
musculus]
Length = 520
Score = 33.1 bits (74), Expect = 1.6
Identities = 17/41 (41%), Positives = 23/41 (55%)
Frame = -3
Query: 415 AWHLPSTCGDPALKLLEASGGHDCLLSGDKPTGLRQVAPVV 293
AWH S+ G P +E S DC L+G +PTG++ P V
Sbjct: 293 AWHEESS-GGPESCPVETSAPPDCALAGPRPTGVKTPGPPV 332
