Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002784A_C01 KCC002784A_c01
(537 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB17749.1| putative coatmer beta subunit (beta-coat protein... 200 1e-50
dbj|BAC87706.1| coatomer subunit beta [Botryococcus braunii] 192 3e-48
ref|NP_194876.1| coatomer beta subunit (beta-coat protein) (beta... 190 9e-48
ref|NP_194877.2| coatomer beta subunit (beta-coat protein) (beta... 190 9e-48
pir||T10679 hypothetical protein F3L17.60 - Arabidopsis thaliana... 182 2e-45
>dbj|BAB17749.1| putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza
sativa (japonica cultivar-group)]
gi|13873019|dbj|BAB44123.1| putative coatmer beta subunit
(beta-coat protein) (beta-COP) [Oryza sativa (japonica
cultivar-group)]
Length = 1036
Score = 200 bits (508), Expect = 1e-50
Identities = 108/148 (72%), Positives = 119/148 (79%)
Frame = +2
Query: 92 KASAQARAAVQPDDLIDFQVLKNRKGLSQLEVEDEVTSDLARATGYAEAAAAASSRLNRV 271
KA AQ A QPDDLIDF LK+R+G+SQLE+EDEV DL ATG A ++RLNR+
Sbjct: 747 KAKAQISHA-QPDDLIDFYHLKSRRGMSQLELEDEVQDDLKAATGGFTKDAYDANRLNRI 805
Query: 272 LQLTGLSDPVYAEAVVTVHQYDIVLDVTVTNRTAETMQALCLELATMGDLKLVELAQNYT 451
LQLTG SDPVYAEA VTVH YDIVLDVT+ NRT ET+Q LCLELATMGDLKLV+ QNYT
Sbjct: 806 LQLTGFSDPVYAEAYVTVHHYDIVLDVTIINRTKETLQNLCLELATMGDLKLVDRPQNYT 865
Query: 452 LAPGDTKLIRANIKVSSTETGVIFGNIV 535
LAP +K IRANIKVSSTETGVIFGNIV
Sbjct: 866 LAPESSKQIRANIKVSSTETGVIFGNIV 893
>dbj|BAC87706.1| coatomer subunit beta [Botryococcus braunii]
Length = 947
Score = 192 bits (487), Expect = 3e-48
Identities = 104/163 (63%), Positives = 121/163 (73%)
Frame = +2
Query: 47 ASLTHEKQR*GQCCCKASAQARAAVQPDDLIDFQVLKNRKGLSQLEVEDEVTSDLARATG 226
+++ H+KQ+ K +A+++ QPD+LIDF LK R+G+SQLE + TG
Sbjct: 645 SAMIHDKQKREAAEAKTK-EAKSSAQPDELIDFHHLKARRGMSQLESRTRWPPICSARTG 703
Query: 227 YAEAAAAASSRLNRVLQLTGLSDPVYAEAVVTVHQYDIVLDVTVTNRTAETMQALCLELA 406
+ A A S RLNRVLQLTGL+DPVYAEA +TVHQYDIVLDVTV NRT ET+Q LCLELA
Sbjct: 704 LVDVAGADSLRLNRVLQLTGLADPVYAEAYLTVHQYDIVLDVTVINRTKETLQNLCLELA 763
Query: 407 TMGDLKLVELAQNYTLAPGDTKLIRANIKVSSTETGVIFGNIV 535
TMGDLKLVE QNYTL G TK IRANIKVSSTETG IFGNIV
Sbjct: 764 TMGDLKLVERPQNYTLGAGATKTIRANIKVSSTETGAIFGNIV 806
>ref|NP_194876.1| coatomer beta subunit (beta-coat protein) (beta-COP), putative
[Arabidopsis thaliana] gi|7447850|pir||T10678
hypothetical protein F3L17.50 - Arabidopsis thaliana
gi|5262759|emb|CAB45907.1| putative protein [Arabidopsis
thaliana] gi|7270051|emb|CAB79866.1| putative protein
[Arabidopsis thaliana]
Length = 971
Score = 190 bits (483), Expect = 9e-48
Identities = 103/148 (69%), Positives = 116/148 (77%)
Frame = +2
Query: 92 KASAQARAAVQPDDLIDFQVLKNRKGLSQLEVEDEVTSDLARATGYAEAAAAASSRLNRV 271
KA Q A QPDDLIDF LK+RKG+SQLE+ED+V DL RATG +++LNR+
Sbjct: 682 KAKTQTTHA-QPDDLIDFFHLKSRKGMSQLELEDQVQDDLKRATGEFTKDENDANKLNRI 740
Query: 272 LQLTGLSDPVYAEAVVTVHQYDIVLDVTVTNRTAETMQALCLELATMGDLKLVELAQNYT 451
LQLTG SDPVYAEA VTVH YDI L+VTV NRT ET+Q LCLELATMGDLKLVE QNY+
Sbjct: 741 LQLTGFSDPVYAEAYVTVHHYDIALEVTVINRTKETLQNLCLELATMGDLKLVERPQNYS 800
Query: 452 LAPGDTKLIRANIKVSSTETGVIFGNIV 535
LAP + I+ANIKVSSTETGVIFGNIV
Sbjct: 801 LAPERSMQIKANIKVSSTETGVIFGNIV 828
>ref|NP_194877.2| coatomer beta subunit (beta-coat protein) (beta-COP), putative
[Arabidopsis thaliana]
Length = 948
Score = 190 bits (483), Expect = 9e-48
Identities = 103/148 (69%), Positives = 116/148 (77%)
Frame = +2
Query: 92 KASAQARAAVQPDDLIDFQVLKNRKGLSQLEVEDEVTSDLARATGYAEAAAAASSRLNRV 271
KA Q A QPDDLIDF LK+RKG+SQLE+ED+V DL RATG +++LNR+
Sbjct: 659 KAKTQTTHA-QPDDLIDFFHLKSRKGMSQLELEDQVQDDLKRATGEFTKDENDANKLNRI 717
Query: 272 LQLTGLSDPVYAEAVVTVHQYDIVLDVTVTNRTAETMQALCLELATMGDLKLVELAQNYT 451
LQLTG SDPVYAEA VTVH YDI L+VTV NRT ET+Q LCLELATMGDLKLVE QNY+
Sbjct: 718 LQLTGFSDPVYAEAYVTVHHYDIALEVTVINRTKETLQNLCLELATMGDLKLVERPQNYS 777
Query: 452 LAPGDTKLIRANIKVSSTETGVIFGNIV 535
LAP + I+ANIKVSSTETGVIFGNIV
Sbjct: 778 LAPERSMQIKANIKVSSTETGVIFGNIV 805
>pir||T10679 hypothetical protein F3L17.60 - Arabidopsis thaliana
gi|5262760|emb|CAB45908.1| Beta-COP-like protein
[Arabidopsis thaliana] gi|7270052|emb|CAB79867.1|
Beta-COP-like protein [Arabidopsis thaliana]
Length = 958
Score = 182 bits (462), Expect = 2e-45
Identities = 103/158 (65%), Positives = 116/158 (73%), Gaps = 10/158 (6%)
Frame = +2
Query: 92 KASAQARAAVQPDDLIDFQVLKNRK----------GLSQLEVEDEVTSDLARATGYAEAA 241
KA Q A QPDDLIDF LK+RK G+SQLE+ED+V DL RATG
Sbjct: 659 KAKTQTTHA-QPDDLIDFFHLKSRKMSLLMINFFQGMSQLELEDQVQDDLKRATGEFTKD 717
Query: 242 AAASSRLNRVLQLTGLSDPVYAEAVVTVHQYDIVLDVTVTNRTAETMQALCLELATMGDL 421
+++LNR+LQLTG SDPVYAEA VTVH YDI L+VTV NRT ET+Q LCLELATMGDL
Sbjct: 718 ENDANKLNRILQLTGFSDPVYAEAYVTVHHYDIALEVTVINRTKETLQNLCLELATMGDL 777
Query: 422 KLVELAQNYTLAPGDTKLIRANIKVSSTETGVIFGNIV 535
KLVE QNY+LAP + I+ANIKVSSTETGVIFGNIV
Sbjct: 778 KLVERPQNYSLAPERSMQIKANIKVSSTETGVIFGNIV 815
