>KCC002775A_C01 KCC002775A_c01
ccctgTTCCTAGTACCTCACATCATACATTATAAACACATTCTTGCTGGGTCTACTTGTT
GTAGCCTACGTGCCCGATCACCATTTCGCGTGTGTCCGCCCAGACCTTCTCATTTAGCTA
TACCTGACTGAATCTAGACCTTCAGTGTGGTTGTCGACCTACTGGAAACACACAGATATC
CCGGCGCGCCCGGTATACTTGAAGTCGGGGCGTGCGAGACGCACGCGCGCGGCCTCCCAC
ACCACCAGCTTAGGGGCCACGCGCGCCGCGGCCGTGATCAAGATGGCCGCAAAGGCTCCG
GCTCCGGGGAAAGCAAACAAGGAGGGCTTTGAGCTTTTCCTGGAGCGCGTCAAGCAGGGC
AAGGATGCTATGTGGAACAAGGAGGAGCTGCTGACGGCTATGCACTGGCAGAAGCAGGTC
ACGGCGCTTATCATTGGCATCGTGTGCGGCGTGCTGCCTCTGACCGGCCTCAATGGATTC
CTAACGTTTGCCATCGCGCAAGGGCTGTGCACAGTGATCTTCTACCGTGGTGTGTTGAGA
ATCGACGA

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002775A_C01 KCC002775A_c01
         (548 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_080400.1| RIKEN cDNA 1110008F13 [Mus musculus] gi|2421159...    50  2e-05
ref|NP_061328.1| putative Rab5-interacting protein [Homo sapiens...    49  4e-05
sp|Q9BUV8|CT24_HUMAN Protein C20orf24 (Rab5-interacting protein)...    49  4e-05
gb|AAK07515.1|AF274936_1 PNAS-11 [Homo sapiens]                        49  4e-05
ref|XP_215904.1| similar to RIKEN cDNA 1110008F13 [Rattus norveg...    49  6e-05

>ref|NP_080400.1| RIKEN cDNA 1110008F13 [Mus musculus]
           gi|24211597|sp|Q9CQT9|CT24_MOUSE Protein C20orf24
           homolog gi|12832447|dbj|BAB22111.1| unnamed protein
           product [Mus musculus] gi|12834314|dbj|BAB22864.1|
           unnamed protein product [Mus musculus]
           gi|18043932|gb|AAH19445.1| RIKEN cDNA 1110008F13 [Mus
           musculus]
          Length = 129

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = +1

Query: 364 DAMWN-KEELLTAMHWQKQVTALIIGIVCGVLPLTGLNGFLTFAIAQGLCTVIFYRGVLR 540
           DA W+ K+E L  ++W +Q+ AL++G++ GVLPL G  G   F +       +++   L+
Sbjct: 32  DAAWDDKDEFLDVIYWFRQIIALVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQ 91

Query: 541 ID 546
           ID
Sbjct: 92  ID 93

>ref|NP_061328.1| putative Rab5-interacting protein [Homo sapiens]
           gi|6563214|gb|AAF17201.1|AF112213_1 putative
           Rab5-interacting protein [Homo sapiens]
           gi|6983727|emb|CAB75367.1| dJ977B1.3.1 (novel protein
           similar to putative RAB5-interacting protein (isoform
           1)) [Homo sapiens]
          Length = 129

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 21/62 (33%), Positives = 37/62 (58%), Gaps = 1/62 (1%)
 Frame = +1

Query: 364 DAMW-NKEELLTAMHWQKQVTALIIGIVCGVLPLTGLNGFLTFAIAQGLCTVIFYRGVLR 540
           DA W +K+E L  ++W +Q+ A+++G++ GVLPL G  G   F +       +++   L+
Sbjct: 32  DAAWEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQ 91

Query: 541 ID 546
           ID
Sbjct: 92  ID 93

>sp|Q9BUV8|CT24_HUMAN Protein C20orf24 (Rab5-interacting protein) (RIP5) (PNAS-11)
           gi|12804851|gb|AAH01871.1| C20orf24 protein [Homo
           sapiens]
          Length = 137

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 21/62 (33%), Positives = 37/62 (58%), Gaps = 1/62 (1%)
 Frame = +1

Query: 364 DAMW-NKEELLTAMHWQKQVTALIIGIVCGVLPLTGLNGFLTFAIAQGLCTVIFYRGVLR 540
           DA W +K+E L  ++W +Q+ A+++G++ GVLPL G  G   F +       +++   L+
Sbjct: 32  DAAWEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQ 91

Query: 541 ID 546
           ID
Sbjct: 92  ID 93

>gb|AAK07515.1|AF274936_1 PNAS-11 [Homo sapiens]
          Length = 131

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 21/62 (33%), Positives = 37/62 (58%), Gaps = 1/62 (1%)
 Frame = +1

Query: 364 DAMW-NKEELLTAMHWQKQVTALIIGIVCGVLPLTGLNGFLTFAIAQGLCTVIFYRGVLR 540
           DA W +K+E L  ++W +Q+ A+++G++ GVLPL G  G   F +       +++   L+
Sbjct: 32  DAAWEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQ 91

Query: 541 ID 546
           ID
Sbjct: 92  ID 93

>ref|XP_215904.1| similar to RIKEN cDNA 1110008F13 [Rattus norvegicus]
          Length = 129

 Score = 48.5 bits (114), Expect = 6e-05
 Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = +1

Query: 364 DAMWN-KEELLTAMHWQKQVTALIIGIVCGVLPLTGLNGFLTFAIAQGLCTVIFYRGVLR 540
           DA W+ K+E L  ++W +Q+ A+++G++ G+LPL G  G   F +       +++   L+
Sbjct: 32  DAAWDDKDEFLDVIYWFRQIIAVVLGVIWGILPLRGFLGIAGFCLINAGVLYLYFSNYLQ 91

Query: 541 ID 546
           ID
Sbjct: 92  ID 93

EST assemble image

clone accession position 1 LC006a05_r AV619276 1 557 2 LC089c05_r AV625206 6 359 3 MX009e05_r BP086468 17 281

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