Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002769A_C01 KCC002769A_c01
(741 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB90049.1| OSJNBb0049O23.6 [Oryza sativa (japonica cultivar... 57 3e-07
gb|AAP53741.1| putative rice tungro bacilliform virus; reverse t... 50 5e-05
ref|ZP_00009817.1| COG2885: Outer membrane protein and related p... 50 5e-05
emb|CAE05671.1| OSJNBb0033P05.10 [Oryza sativa (japonica cultiva... 49 8e-05
emb|CAE02390.1| OSJNBb0080H08.17 [Oryza sativa (japonica cultiva... 49 8e-05
>dbj|BAB90049.1| OSJNBb0049O23.6 [Oryza sativa (japonica cultivar-group)]
Length = 305
Score = 57.0 bits (136), Expect = 3e-07
Identities = 45/135 (33%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Frame = -2
Query: 407 EKAQAPSPHSC*RDSHGGGSAMLATAALTPSRFTFDMSSLIVVIATHHRASCRVPACPP* 228
++ Q P PH HG S TAA+ P +++HH PP
Sbjct: 46 QRRQPPPPHR--HHYHGAASLAATTAAIRPPPQLASRRISSCRLSSHHSTRRLATNQPPP 103
Query: 227 SPTQRRSAPRH*PPHPCPPGPILPRGWARQ*SPPRAPPAAPPQSPSPTPQTRAHAWQSPR 48
SP S H PP P P L A S P P APP+ P P P A ++SPR
Sbjct: 104 SPATVGSHSHHQPP-PTSRRPDL--AGAADASQPLPPTPAPPRRPPPPPSFPAAGYRSPR 160
Query: 47 RGGP-TGNPSRHHRA 6
G P G+ RH RA
Sbjct: 161 TGQPWHGSGHRHRRA 175
>gb|AAP53741.1| putative rice tungro bacilliform virus; reverse transcriptase [Oryza
sativa (japonica cultivar-group)]
Length = 2877
Score = 49.7 bits (117), Expect = 5e-05
Identities = 31/94 (32%), Positives = 39/94 (40%), Gaps = 2/94 (2%)
Frame = -2
Query: 281 VIATHHRASCRVPA--CPP*SPTQRRSAPRH*PPHPCPPGPILPRGWARQ*SPPRAPPAA 108
+I +A+ R P+ PP P +P H PP P PP +PPRAP
Sbjct: 1728 IILPGRQAASRAPSPPAPPSPPQDPAPSPPHAPPAPSPPQAPASTPQDPAPTPPRAPTPT 1787
Query: 107 PPQSPSPTPQTRAHAWQSPRRGGPTGNPSRHHRA 6
PPQ+P P P + G P P H RA
Sbjct: 1788 PPQAPLPAPS---------KSGAPPAPPLAHTRA 1812
>ref|ZP_00009817.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Rhodopseudomonas palustris]
Length = 689
Score = 49.7 bits (117), Expect = 5e-05
Identities = 26/67 (38%), Positives = 33/67 (48%)
Frame = -2
Query: 236 PP*SPTQRRSAPRH*PPHPCPPGPILPRGWARQ*SPPRAPPAAPPQSPSPTPQTRAHAWQ 57
PP P SAP PPH PP P P+ A + P PAAPP + +P A +
Sbjct: 117 PPPPPPPSHSAPPPPPPHAAPPPPPAPKPSAPPTAAPAERPAAPPPAAAPVRPPAPPAGE 176
Query: 56 SPRRGGP 36
+P+R GP
Sbjct: 177 APQRRGP 183
Score = 40.0 bits (92), Expect = 0.038
Identities = 38/128 (29%), Positives = 49/128 (37%), Gaps = 14/128 (10%)
Frame = -2
Query: 347 AMLATAALTPSRFTFDMSSLIVVIATHHRASC------RVPACPP*SPTQRRSA------ 204
A+LAT ALT + SLI A AS V P +P++ ++
Sbjct: 7 ALLATTALT-------LGSLIGHPAAAESASAPMLLAQAVQGGPAPAPSEEKAKEAPPPG 59
Query: 203 --PRH*PPHPCPPGPILPRGWARQ*SPPRAPPAAPPQSPSPTPQTRAHAWQSPRRGGPTG 30
P PP P P P A P PP APP++ P P A +P+R P
Sbjct: 60 PRPAPAPPKAAPSAPPPPPAAAPPHVAPPPPPPAPPRAAPPPPPPAAAPAPAPKRAEPPP 119
Query: 29 NPSRHHRA 6
P H A
Sbjct: 120 PPPPSHSA 127
Score = 37.7 bits (86), Expect = 0.19
Identities = 26/72 (36%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Frame = -2
Query: 242 ACPP*SPTQRRSAP---RH*PPHPCPPGPILPRGWARQ*SPPRAPPAAPPQSPSPTPQTR 72
A PP P AP R PP P PP P PP P AAPP P+P P
Sbjct: 97 AAPPPPPPAAAPAPAPKRAEPPPPPPPSHSAP--------PPPPPHAAPPPPPAPKPSAP 148
Query: 71 AHAWQSPRRGGP 36
A + R P
Sbjct: 149 PTAAPAERPAAP 160
Score = 36.6 bits (83), Expect = 0.42
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = -2
Query: 206 APRH*PPHPCPPGPILPRGWARQ*SPPRAPPAAP-----PQSPSPTPQTRAHAWQSPRRG 42
APR PP P P P A +P AP AAP P P+ P R + P+ G
Sbjct: 241 APRRGPPPP-PAAANPPPAAAPTPAPSAAPQAAPTSPANPSGPAVAPVARPSGERGPQPG 299
Query: 41 GPTGNP 24
P G P
Sbjct: 300 APAGGP 305
Score = 34.3 bits (77), Expect = 2.1
Identities = 24/72 (33%), Positives = 31/72 (42%), Gaps = 4/72 (5%)
Frame = -2
Query: 224 PTQRRSAPRH*P---PHPCPPGPILPRGWARQ*SPPRAPPAA-PPQSPSPTPQTRAHAWQ 57
P +RR P P P+ PG P G A + PP P AA PP + +PTP A
Sbjct: 212 PGERRGPPPGAPGTPPNATAPGMTPPPGEAPRRGPPPPPAAANPPPAAAPTPAPSAAPQA 271
Query: 56 SPRRGGPTGNPS 21
+P P+
Sbjct: 272 APTSPANPSGPA 283
Score = 33.9 bits (76), Expect = 2.7
Identities = 28/84 (33%), Positives = 30/84 (35%), Gaps = 9/84 (10%)
Frame = -2
Query: 242 ACPP*SPTQRRSAPRH*PPHPCP---------PGPILPRGWARQ*SPPRAPPAAPPQSPS 90
A PP P R+AP PP P P P P A PP A P PP
Sbjct: 86 APPPPPPAPPRAAPPPPPPAAAPAPAPKRAEPPPPPPPSHSAPPPPPPHAAPPPPPAPKP 145
Query: 89 PTPQTRAHAWQSPRRGGPTGNPSR 18
P T A A + P P P R
Sbjct: 146 SAPPTAAPA-ERPAAPPPAAAPVR 168
Score = 33.5 bits (75), Expect = 3.6
Identities = 31/89 (34%), Positives = 35/89 (38%), Gaps = 16/89 (17%)
Frame = -2
Query: 242 ACPP*SPTQRRSAP-------RH*PPHPC-----PPGPILPRGWARQ*SPPRA--PPAAP 105
A PP P + SAP R P P PP P R+ PP A P A P
Sbjct: 135 AAPPPPPAPKPSAPPTAAPAERPAAPPPAAAPVRPPAPPAGEAPQRRGPPPGAVPPNAVP 194
Query: 104 PQSPSPTPQTRAHAWQSP--RRGGPTGNP 24
P + +P A Q P RRG P G P
Sbjct: 195 PNAAAPDAAKPDAAKQPPGERRGPPPGAP 223
Score = 32.7 bits (73), Expect(2) = 0.89
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 12/82 (14%)
Frame = -2
Query: 245 PACPP*SPTQRRSAPRH*PPHPCPPGPILPRGWARQ*SPPRA-----------PPAAPPQ 99
P PP +R P PP PP + P A + P A PP AP
Sbjct: 169 PPAPPAGEAPQRRGP---PPGAVPPNAVPPNAAAPDAAKPDAAKQPPGERRGPPPGAPGT 225
Query: 98 SPSPT-PQTRAHAWQSPRRGGP 36
P+ T P ++PRRG P
Sbjct: 226 PPNATAPGMTPPPGEAPRRGPP 247
Score = 21.6 bits (44), Expect(2) = 0.89
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = -3
Query: 334 PPP*RPHASPSTCLHSSSSSPLT 266
PPP PHA+P S+P T
Sbjct: 128 PPPPPPHAAPPPPPAPKPSAPPT 150
>emb|CAE05671.1| OSJNBb0033P05.10 [Oryza sativa (japonica cultivar-group)]
Length = 1054
Score = 48.9 bits (115), Expect = 8e-05
Identities = 31/94 (32%), Positives = 43/94 (44%), Gaps = 2/94 (2%)
Frame = -2
Query: 281 VIATHHRASCRVPA--CPP*SPTQRRSAPRH*PPHPCPPGPILPRGWARQ*SPPRAPPAA 108
+I +A+ R P+ PP P +P H PP P PP P +PP+ P +
Sbjct: 541 IILPGRQAASRAPSPPAPPSPPQDPAPSPPHAPPAPSPPQAPAP-------TPPQDPAPS 593
Query: 107 PPQSPSPTPQTRAHAWQSPRRGGPTGNPSRHHRA 6
PP++P+PTP S R P P+ H RA
Sbjct: 594 PPRAPTPTPPQAPLPAPSKSRAPPAAPPA-HTRA 626
>emb|CAE02390.1| OSJNBb0080H08.17 [Oryza sativa (japonica cultivar-group)]
Length = 1050
Score = 48.9 bits (115), Expect = 8e-05
Identities = 31/94 (32%), Positives = 43/94 (44%), Gaps = 2/94 (2%)
Frame = -2
Query: 281 VIATHHRASCRVPA--CPP*SPTQRRSAPRH*PPHPCPPGPILPRGWARQ*SPPRAPPAA 108
+I +A+ R P+ PP P +P H PP P PP P +PP+ P
Sbjct: 579 IILPGRQAASRAPSPPAPPSPPQDPAPSPPHAPPAPSPPQAPAP-------TPPQDPAPT 631
Query: 107 PPQSPSPTPQTRAHAWQSPRRGGPTGNPSRHHRA 6
PP++P+PTP S R P +P+ H RA
Sbjct: 632 PPRAPTPTPPQAPLPAPSKSRAPPAPSPA-HTRA 664
