Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002764A_C01 KCC002764A_c01
(516 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P03664|VG4_BPFD GENE IV PROTEIN (GPIV) gi|75784|pir||Z4BPFD g... 32 4.8
ref|ZP_00052226.1| COG0253: Diaminopimelate epimerase [Magnetosp... 32 4.8
sp|P03666|VG4_BPF1 GENE IV PROTEIN (GPIV) gi|75786|pir||Z4BPF1 g... 32 4.8
ref|XP_304347.1| hypothetical protein XP_304347 [Homo sapiens] 32 4.8
ref|NP_294670.1| conserved hypothetical protein [Deinococcus rad... 32 4.8
>sp|P03664|VG4_BPFD GENE IV PROTEIN (GPIV) gi|75784|pir||Z4BPFD gene IV protein - phage
fd (strain 478, Heidelberg) gi|14941|emb|CAA23854.1|
GENE IV [Enterobacteria phage fd]
gi|215404|gb|AAA32312.1| IV (morphogenesis)
gi|8489183|gb|AAF75602.1|AF217317_5 morphogenetic
protein IV [Filamentous phage cloning vector fd-tet]
gi|8698959|gb|AAF78531.1| protein IV [Filamentous phage
display vector fMCS1] gi|21667075|gb|AAM73892.1|
morphogenetic protein IV [Filamentous phage display
vector f8-5] gi|21667089|gb|AAM73904.1| morphogenetic
protein IV [Filamentous phage display vector c8-4]
gi|223541|prf||0812197E DNA,phage
Length = 426
Score = 32.0 bits (71), Expect = 4.8
Identities = 30/91 (32%), Positives = 44/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 42 ISQLGVFVGVFLGTVGFLNVRMHLQHASHQKLLHLDHGHTQSSPVAAASALGRKDP--VK 215
+S G G+F G V L+VR L+ SH K+L + T S + S +G+ P
Sbjct: 239 LSSAGGSFGIFNGDVLGLSVRA-LKTNSHSKILSVPRILTLSGQKGSIS-VGQNVPFITG 296
Query: 216 PVAVHSTNVSEESYPFKSVEEVNIGVQTGHF 308
V S NV+ PF++VE N+G+ F
Sbjct: 297 RVTGESANVNN---PFQTVERQNVGISMSVF 324
>ref|ZP_00052226.1| COG0253: Diaminopimelate epimerase [Magnetospirillum
magnetotacticum]
Length = 173
Score = 32.0 bits (71), Expect = 4.8
Identities = 25/82 (30%), Positives = 34/82 (40%)
Frame = +1
Query: 223 LSIRQTLARRAIPLRVWRRSTLESKPGISLATTSRGCSKAAR*GRRRLIAGMGWGSTRRQ 402
+SI Q R I LRVW R G++LA + C+ A R RLI G + R
Sbjct: 83 ISIAQVTGRDTIKLRVWERGA-----GLTLACGTAACATAVAASRLRLI-----GRSARI 132
Query: 403 QTRCGTTSHQWGGQATLRSTTP 468
G + +W + T P
Sbjct: 133 ALPGGELAIEWRADDHVLMTGP 154
>sp|P03666|VG4_BPF1 GENE IV PROTEIN (GPIV) gi|75786|pir||Z4BPF1 gene IV protein - phage
f1 gi|14983|emb|CAA23875.1| unnamed protein product
[Enterobacteria phage f1]
Length = 426
Score = 32.0 bits (71), Expect = 4.8
Identities = 30/91 (32%), Positives = 44/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 42 ISQLGVFVGVFLGTVGFLNVRMHLQHASHQKLLHLDHGHTQSSPVAAASALGRKDP--VK 215
+S G G+F G V L+VR L+ SH K+L + T S + S +G+ P
Sbjct: 239 LSSAGGSFGIFNGDVLGLSVRA-LKTNSHSKILSVPRILTLSGQKGSIS-VGQNVPFITG 296
Query: 216 PVAVHSTNVSEESYPFKSVEEVNIGVQTGHF 308
V S NV+ PF++VE N+G+ F
Sbjct: 297 RVTGESANVNN---PFQTVERQNVGISMSVF 324
>ref|XP_304347.1| hypothetical protein XP_304347 [Homo sapiens]
Length = 187
Score = 32.0 bits (71), Expect = 4.8
Identities = 21/53 (39%), Positives = 25/53 (46%), Gaps = 4/53 (7%)
Frame = +2
Query: 266 ECGGGQHWSPNRAFLWQR-LRGVAARLHDREDDD*LP---VWGGDQPGDSRRA 412
ECGG H+ N A W+R AA R D + L + G QP DSR A
Sbjct: 65 ECGGHWHYKVNTALCWKRKTNREAAAFFSRNDTNSLQLLRLMGMQQPDDSRDA 117
>ref|NP_294670.1| conserved hypothetical protein [Deinococcus radiodurans]
gi|7471299|pir||A75456 conserved hypothetical protein -
Deinococcus radiodurans (strain R1)
gi|6458670|gb|AAF10522.1|AE001947_5 conserved
hypothetical protein [Deinococcus radiodurans]
Length = 343
Score = 32.0 bits (71), Expect = 4.8
Identities = 27/84 (32%), Positives = 36/84 (42%)
Frame = +3
Query: 51 LGVFVGVFLGTVGFLNVRMHLQHASHQKLLHLDHGHTQSSPVAAASALGRKDPVKPVAVH 230
LG+ VG F+ + R L A + K HLD+ + + AL + PVK VA H
Sbjct: 159 LGIGVGDFVS----FDARPRLTPAGYVKARHLDNKAAVAVFLTVTRALLQSPPVKTVAFH 214
Query: 231 STNVSEESYPFKSVEEVNIGVQTG 302
T + EEV G TG
Sbjct: 215 VT----------TYEEVGHGAATG 228