KCC002759A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002759A_C01 KCC002759A_c01
GTCAAATACATACTAGTTTCCCTGCCCGGCGACAAGCTTACATTGACTTCGCACAATCGC
AGAAGTCAGAGACTGCGGTAGATTCCTTCAAGAGCAACAGTATGGCTTTCCCATTTGGAC
GACGCCGTAAACATGTTCCTGTGACCTGGCAGCAGCGAGCGGCTGCGGTGGTGCTTACAA
TCCTAACAGTGATACAGACGCCGCTGTTCTCCTACAAGATTACCTACTCGGATGACAGCG
TCCGAACCCGAACCTGGTCCTTGCCAGAGATCGTGGCTGTGGGCCTGCTGCGCACGAACG
CTGAGTCGTATGCTTGGTACGCGCGCGCGGCGCTCATGCCCGGCATCTTCACGCGGACGG
CCCTGCTGCAACTGGACGCGTGTGTCATCCAGCCCAGCGACGCCTGCAATTGGTCCGCTC
TGAAGGACTTTGACGCCATGTGGGCCCTGGCCGACTATAGTGACCAGGTGCCGGTGTTCG
TGGAGCAGCTGGGCGAGTACCGGCAGTACATGCAGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002759A_C01 KCC002759A_c01
         (517 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T00326 hypothetical protein KIAA0550 - human                      39  0.030
ref|NP_001695.1| brain-specific angiogenesis inhibitor 3 [Homo s...    39  0.030
dbj|BAA25476.2| KIAA0550 protein [Homo sapiens]                        39  0.030
ref|XP_237019.2| similar to brain-specific angiogenesis inhibito...    39  0.039
ref|NP_783573.2| brain-specific angiogenesis inhibitor 3 [Mus mu...    39  0.039

>pir||T00326 hypothetical protein KIAA0550 - human
          Length = 984

 Score = 39.3 bits (90), Expect = 0.030
 Identities = 36/125 (28%), Positives = 45/125 (35%), Gaps = 3/125 (2%)
 Frame = +1

Query: 148 GSSERLRWCLQS*Q*YRRRCSPTRLPTRM---TASEPEPGPCQRSWLWACCARTLSRMLG 318
           GS  R R C+     Y   CS     +R+   TA  P  G  +    W+ C+ T  R   
Sbjct: 310 GSQVRTRTCVSP---YGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFTCGRGQR 366

Query: 319 TRARRSCPASSRGRPCCNWTRVSSSPATPAIGPL*RTLTPCGPWPTIVTRCRCSWSSWAS 498
           TR R   P    GRPC         P   A+ P+       G W          WSSW+ 
Sbjct: 367 TRTRSCTPPQYGGRPC-EGPETHHKPCNIALCPV------DGQWQ--------EWSSWSQ 411

Query: 499 TGSTC 513
              TC
Sbjct: 412 CSVTC 416

>ref|NP_001695.1| brain-specific angiogenesis inhibitor 3 [Homo sapiens]
           gi|12643618|sp|O60242|BAI3_HUMAN Brain-specific
           angiogenesis inhibitor 3 precursor
           gi|7512313|pir||T00028 brain-specific angiogenesis
           inhibitor 3 - human gi|3021701|dbj|BAA25363.1| BAI 3
           [Homo sapiens]
          Length = 1522

 Score = 39.3 bits (90), Expect = 0.030
 Identities = 36/125 (28%), Positives = 45/125 (35%), Gaps = 3/125 (2%)
 Frame = +1

Query: 148 GSSERLRWCLQS*Q*YRRRCSPTRLPTRM---TASEPEPGPCQRSWLWACCARTLSRMLG 318
           GS  R R C+     Y   CS     +R+   TA  P  G  +    W+ C+ T  R   
Sbjct: 310 GSQVRTRTCVSP---YGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFTCGRGQR 366

Query: 319 TRARRSCPASSRGRPCCNWTRVSSSPATPAIGPL*RTLTPCGPWPTIVTRCRCSWSSWAS 498
           TR R   P    GRPC         P   A+ P+       G W          WSSW+ 
Sbjct: 367 TRTRSCTPPQYGGRPC-EGPETHHKPCNIALCPV------DGQWQ--------EWSSWSQ 411

Query: 499 TGSTC 513
              TC
Sbjct: 412 CSVTC 416

>dbj|BAA25476.2| KIAA0550 protein [Homo sapiens]
          Length = 1524

 Score = 39.3 bits (90), Expect = 0.030
 Identities = 36/125 (28%), Positives = 45/125 (35%), Gaps = 3/125 (2%)
 Frame = +1

Query: 148 GSSERLRWCLQS*Q*YRRRCSPTRLPTRM---TASEPEPGPCQRSWLWACCARTLSRMLG 318
           GS  R R C+     Y   CS     +R+   TA  P  G  +    W+ C+ T  R   
Sbjct: 312 GSQVRTRTCVSP---YGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFTCGRGQR 368

Query: 319 TRARRSCPASSRGRPCCNWTRVSSSPATPAIGPL*RTLTPCGPWPTIVTRCRCSWSSWAS 498
           TR R   P    GRPC         P   A+ P+       G W          WSSW+ 
Sbjct: 369 TRTRSCTPPQYGGRPC-EGPETHHKPCNIALCPV------DGQWQ--------EWSSWSQ 413

Query: 499 TGSTC 513
              TC
Sbjct: 414 CSVTC 418

>ref|XP_237019.2| similar to brain-specific angiogenesis inhibitor 3 [Rattus
           norvegicus]
          Length = 556

 Score = 38.9 bits (89), Expect = 0.039
 Identities = 36/125 (28%), Positives = 45/125 (35%), Gaps = 3/125 (2%)
 Frame = +1

Query: 148 GSSERLRWCLQS*Q*YRRRCSPTRLPTRM---TASEPEPGPCQRSWLWACCARTLSRMLG 318
           GS  R R C+     Y   CS     +R+   TA  P  G  +    W+ C+ T  R   
Sbjct: 97  GSQVRTRTCVSP---YGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFTCGRGQR 153

Query: 319 TRARRSCPASSRGRPCCNWTRVSSSPATPAIGPL*RTLTPCGPWPTIVTRCRCSWSSWAS 498
           TR R   P    GRPC         P   A+ P+       G W          WSSW+ 
Sbjct: 154 TRTRSCTPPQYGGRPC-EGPETHHKPCNIALCPV------DGQWQ--------EWSSWSH 198

Query: 499 TGSTC 513
              TC
Sbjct: 199 CSVTC 203

>ref|NP_783573.2| brain-specific angiogenesis inhibitor 3 [Mus musculus]
           gi|28628123|gb|AAO27431.1| brain-specific angiogenesis
           inhibitor 3 [Mus musculus]
          Length = 1522

 Score = 38.9 bits (89), Expect = 0.039
 Identities = 36/125 (28%), Positives = 45/125 (35%), Gaps = 3/125 (2%)
 Frame = +1

Query: 148 GSSERLRWCLQS*Q*YRRRCSPTRLPTRM---TASEPEPGPCQRSWLWACCARTLSRMLG 318
           GS  R R C+     Y   CS     +R+   TA  P  G  +    W+ C+ T  R   
Sbjct: 310 GSQVRTRTCVSP---YGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFTCGRGQR 366

Query: 319 TRARRSCPASSRGRPCCNWTRVSSSPATPAIGPL*RTLTPCGPWPTIVTRCRCSWSSWAS 498
           TR R   P    GRPC         P   A+ P+       G W          WSSW+ 
Sbjct: 367 TRTRSCTPPQYGGRPC-EGPETHHKPCNIALCPV------DGQWQ--------EWSSWSH 411

Query: 499 TGSTC 513
              TC
Sbjct: 412 CSVTC 416



EST assemble image


clone accession position
1 LC004a05_r AV619116 1 517
2 MXL008d08_r BP093438 1 406




Chlamydomonas reinhardtii
Kazusa DNA Research Institute