Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002753A_C01 KCC002753A_c01
(804 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||I46884 T-cell receptor beta chain - rabbit (fragment) gi|48... 39 0.13
ref|XP_091306.2| similar to mesothelin [Homo sapiens] 37 0.49
gb|AAK61254.1|AE006464_22 Similar to pre-pro-megakarycyte potent... 37 0.49
dbj|BAC85906.1| unnamed protein product [Homo sapiens] 35 1.9
emb|CAE05785.1| OSJNBb0020J19.14 [Oryza sativa (japonica cultiva... 35 1.9
>pir||I46884 T-cell receptor beta chain - rabbit (fragment)
gi|488328|gb|AAA82093.1| unknown protein
Length = 269
Score = 38.5 bits (88), Expect = 0.13
Identities = 23/68 (33%), Positives = 31/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 265 YLHTNMHVSCMHGSSLCLYSHTGAAPQMHAAYQLFLRSTVLAACRPCPAAASTRLCT-AH 89
++HT+MH + +C YSHT MH T+ C P A A T T H
Sbjct: 54 HVHTHMHTCTHMHTQMCAYSHT--REYMH---------TLTQTCAPTHAYAHTYAHTLTH 102
Query: 88 AQKHIHMH 65
A H+H+H
Sbjct: 103 ANSHVHLH 110
>ref|XP_091306.2| similar to mesothelin [Homo sapiens]
Length = 1076
Score = 36.6 bits (83), Expect = 0.49
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 123 PQP-RPHACALPTHKNTYTCTPCPHARSLEAASCGC 19
P P R H+C LP H TYTCT P L A++ C
Sbjct: 134 PSPTRAHSCHLPVHTVTYTCTLSPTHACLHASTVSC 169
Score = 32.3 bits (72), Expect = 9.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 114 RPHACALPTHKNTYTCTPCP 55
R H+C LP H TY CTP P
Sbjct: 117 RAHSCHLPMHTVTYPCTPSP 136
>gb|AAK61254.1|AE006464_22 Similar to pre-pro-megakarycyte potentiating factor precursor [Homo
sapiens]
Length = 1053
Score = 36.6 bits (83), Expect = 0.49
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 123 PQP-RPHACALPTHKNTYTCTPCPHARSLEAASCGC 19
P P R H+C LP H TYTCT P L A++ C
Sbjct: 107 PSPTRAHSCHLPVHTVTYTCTLSPTHACLHASTVSC 142
Score = 32.3 bits (72), Expect = 9.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 114 RPHACALPTHKNTYTCTPCP 55
R H+C LP H TY CTP P
Sbjct: 90 RAHSCHLPMHTVTYPCTPSP 109
>dbj|BAC85906.1| unnamed protein product [Homo sapiens]
Length = 175
Score = 34.7 bits (78), Expect = 1.9
Identities = 25/89 (28%), Positives = 33/89 (36%), Gaps = 9/89 (10%)
Frame = -3
Query: 295 APLKQQCDLPYLHTNMHV-----SCMHGSSLCLYSHTGAAPQMHAAYQLFLRSTVLAACR 131
A + QC YLHT +H SC + C Y HT A A Q + + T L
Sbjct: 89 AQMHTQCT--YLHTRVHTHTHRHSCPDANIHCTYLHTRAHTHAQALMQTYAQCTYLHTRT 146
Query: 130 PCPAAASTRLCT----AHAQKHIHMHALP 56
A CT + +H H +P
Sbjct: 147 HTHTQALMHRCTHTQCTYLHTRVHAHTVP 175
>emb|CAE05785.1| OSJNBb0020J19.14 [Oryza sativa (japonica cultivar-group)]
Length = 341
Score = 34.7 bits (78), Expect = 1.9
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = -3
Query: 652 YKNKRIRLSVGQLP-----GSRQIAYDAQAAVTRQMLQHDSAWCSHVQSRRSISQTLHPR 488
Y+ R R S G L + DA AA+ RQ L S+W + S +ISQ +
Sbjct: 158 YEALRERTSTGDLSYLHYGADSGVDPDAVAAIRRQRLSEISSWFNPQNSHLAISQGQTEQ 217
Query: 487 TPAENTDKQCRIHVSTTAARVSHRRCS 407
TPA ++ IH V H R S
Sbjct: 218 TPASPSNNS--IHHGAVVTTVVHTRWS 242
