KCC002752A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC002752A_C01 KCC002752A_c01
ggCAACCCTGCATTGTGCTTTGTTTCGTGGCGATACCCTCTCGGTTGAGATTTCGGGTGC
GCTTGCTCGTTTCACAATCTTCTGTACATTTTAAAGCAATTAGTTGTTCCTCCTGGTAGT
GTTAAGTCTTTGATTGCATTTAGGTTTCGCAAACCTTGCTCGTTGGCCAGTAGCCGCCCG
GCGAGCCTCCGGGTGGCCAGGCCGTAGCTGCCATGGCTCAGGAGGATGATACGATGAGAG
GTGAGGCTTCAGAGCAGAGAGCAGCGACAGGCGGTAATGGAGATGCCGCCCGGCCAGTCA
AGCGGTATCGGCGGGACGAGCTCGACAAGGAAGAAGAGAACCCGATGCTGCTTTCGGAGG
ACGGTGACGATGAGGGGCAGGAGTATGTGCCACTGCGCAAGCGGAGGGAGGCGGAGGAGT
CCCGGCTGGTCGCGCTGCTGCGGGGTGGGCGGCGGGCGGGCAGCGCGGAGCCTGACAACG
GCGGGCGGGCCGGCAGTGAGCCGCCTGGCGACCGGCCCAAGGAGTCGCTGC
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002752A_C01 KCC002752A_c01
(531 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB39741.1| membrane-type mosaic serine protease [Homo sapiens] 49 5e-05
gb|AAO38062.1| transmembrane protease serine 6 [Homo sapiens] 49 5e-05
dbj|BAB55376.1| unnamed protein product [Homo sapiens] 48 9e-05
ref|NP_114435.1| mosaic serine protease [Homo sapiens] gi|134299... 47 1e-04
sp|P14328|SP96_DICDI Spore coat protein SP96 gi|84145|pir||S0763... 47 2e-04
>dbj|BAB39741.1| membrane-type mosaic serine protease [Homo sapiens]
Length = 581
Score = 48.5 bits (114), Expect = 5e-05
Identities = 32/77 (41%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = -1
Query: 531 AATPWAGRQAAHCRPARRCQAPRCPPAAHPAAARPAGTPP---PPSACAVAHTPAPHRHR 361
A TP AG A PA P A PA A PAGTPP P+ + A TP P R
Sbjct: 12 ARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTP-PGRAS 70
Query: 360 PPKAASGSLLPCRARPA 310
P +A+ P RA PA
Sbjct: 71 PGRASPAQASPARASPA 87
>gb|AAO38062.1| transmembrane protease serine 6 [Homo sapiens]
Length = 558
Score = 48.5 bits (114), Expect = 5e-05
Identities = 32/77 (41%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = -1
Query: 531 AATPWAGRQAAHCRPARRCQAPRCPPAAHPAAARPAGTPP---PPSACAVAHTPAPHRHR 361
A TP AG A PA P A PA A PAGTPP P+ + A TP P R
Sbjct: 12 ARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTP-PGRAS 70
Query: 360 PPKAASGSLLPCRARPA 310
P +A+ P RA PA
Sbjct: 71 PGRASPAQASPARASPA 87
>dbj|BAB55376.1| unnamed protein product [Homo sapiens]
Length = 491
Score = 47.8 bits (112), Expect = 9e-05
Identities = 32/81 (39%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = -1
Query: 531 AATPWAGRQAAHCRPARRCQAPRCPPAAHPAAARPAGTPP---PPSACAVAHTP----AP 373
A TP AG A PA P A PA A PAGTPP P+ + A TP +P
Sbjct: 12 ARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASP 71
Query: 372 HRHRPPKAASGSLLPCRARPA 310
R P +A+ P RA PA
Sbjct: 72 GRASPAQASPAQASPARASPA 92
>ref|NP_114435.1| mosaic serine protease [Homo sapiens] gi|13429972|dbj|BAB39742.1|
mosaic serine protease [Homo sapiens]
Length = 537
Score = 47.4 bits (111), Expect = 1e-04
Identities = 31/80 (38%), Positives = 37/80 (45%), Gaps = 3/80 (3%)
Frame = -1
Query: 531 AATPWAGRQAAHCRPARRCQAPRCPPAAHPAAARPAGTPP---PPSACAVAHTPAPHRHR 361
A TP AG A PA P A PA A PAGTPP P+ + A TP P R
Sbjct: 12 ARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTP-PGRAS 70
Query: 360 PPKAASGSLLPCRARPADTA 301
P +A+ P +A PA +
Sbjct: 71 PGRASPAQASPAQASPAQAS 90
Score = 31.2 bits (69), Expect = 8.7
Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Frame = -3
Query: 511 SPGGSLPARPPLSGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSS 332
S G + PAR P +G++ PA+ P + R S A +SP+ S G
Sbjct: 5 SHGNASPARTPSAGAS-PAQASPAGTPPGRASPAQ------------ASPAQASPAGTPP 51
Query: 331 SLSSSSRRYRLTGRAASPL--PPVAALCSEASPLIVSSS*AMAATAWPPGGSP 179
+S ++ ASP PP A ASP S + A A A P SP
Sbjct: 52 GRASPAQ--------ASPAGTPPGRASPGRASPAQASPAQASPAQASPARASP 96
>sp|P14328|SP96_DICDI Spore coat protein SP96 gi|84145|pir||S07638 spore coat protein
SP96 precursor - slime mold (Dictyostelium discoideum)
gi|295736|emb|CAA34508.1| spore coat protein sp96
[Dictyostelium discoideum]
Length = 600
Score = 46.6 bits (109), Expect = 2e-04
Identities = 39/103 (37%), Positives = 49/103 (46%)
Frame = -3
Query: 511 SPGGSLPARPPLSGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSS 332
S GS SGS+ A P SSA S S+S S + S SSSPSS +S S
Sbjct: 439 SASGSSAVSSSASGSSA-ASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSP 497
Query: 331 SLSSSSRRYRLTGRAASPLPPVAALCSEASPLIVSSS*AMAAT 203
S S+SS + ++S P +A S AS SS+ AAT
Sbjct: 498 SSSASSSSAPSSSASSSSAPSSSASSSSASSSSASSAATTAAT 540
Score = 37.4 bits (85), Expect = 0.12
Identities = 33/90 (36%), Positives = 43/90 (47%)
Frame = -3
Query: 529 SDSLGRSPGGSLPARPPLSGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSES 350
S + SP S + P S +A + P SSA+S S +S S S +SS S+ S
Sbjct: 462 SSAASSSPSSSAASSSPSSSAASSS---PSSSASSSSSPSSSASSSSAPSSSASSSSAPS 518
Query: 349 SIGFSSSLSSSSRRYRLTGRAASPLPPVAA 260
S SSS SSSS T AA+ + AA
Sbjct: 519 SSASSSSASSSSASSAAT-TAATTIATTAA 547
Score = 34.3 bits (77), Expect = 1.0
Identities = 32/100 (32%), Positives = 47/100 (47%)
Frame = -3
Query: 499 SLPARPPLSGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSSSLSS 320
SLP +GS + +S +S S+++ + S SSSPSS SSS SS
Sbjct: 415 SLPRPTTTTGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSS---AASSSPSS 471
Query: 319 SSRRYRLTGRAASPLPPVAALCSEASPLIVSSS*AMAATA 200
S+ + AAS P +A S + SSS A +++A
Sbjct: 472 SAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSA 511
Score = 33.1 bits (74), Expect = 2.3
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = -3
Query: 529 SDSLGRSPGGSLPARPPLSGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSS-PSSE 353
S + SP S + P S +A + P S+A+S SS++ S + S SSS PSS
Sbjct: 453 SSAASSSPSSSAASSSPSSSAA--SSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSS 510
Query: 352 SSIGFSSSLSSSSRRYRLTGRAASPLPPVAALCSEASPLIVSSS*AMAAT 203
+S + S S+SS + +++ + + A+ +++ A T
Sbjct: 511 ASSSSAPSSSASSSSASSSSASSAATTAATTIATTAATTTATTTATTATT 560
Score = 33.1 bits (74), Expect = 2.3
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = -3
Query: 475 SGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSSSLSS--SSRRYR 302
SGS+ + SSA S S+S S + S SSSPSS SSS SS SS
Sbjct: 441 SGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSS---AASSSPSSSASSSSSP 497
Query: 301 LTGRAASPLPPVAALCSEASPLIVSSS*AMAATA 200
+ ++S P +A S A SSS A +++A
Sbjct: 498 SSSASSSSAPSSSASSSSAPSSSASSSSASSSSA 531
Score = 32.3 bits (72), Expect = 3.9
Identities = 27/84 (32%), Positives = 42/84 (49%)
Frame = -3
Query: 472 GSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSSSLSSSSRRYRLTG 293
GS + S+ +S S +S S + S SSSPSS ++ SSS SSS+ +
Sbjct: 433 GSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAA---SSSPSSSAASSSPSS 489
Query: 292 RAASPLPPVAALCSEASPLIVSSS 221
A+S P ++ S ++P +SS
Sbjct: 490 SASSSSSPSSSASSSSAPSSSASS 513
Score = 31.6 bits (70), Expect = 6.7
Identities = 30/89 (33%), Positives = 44/89 (48%)
Frame = -3
Query: 466 ALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSSSLSSSSRRYRLTGRA 287
A+ RP ++ ++ DSSA L S + S S S + SS SS+ SSS + A
Sbjct: 413 AVSLPRPTTTTGSTSDSSA---LGSTSESSASGSSAVSSSASGSSAASSSP-----SSSA 464
Query: 286 ASPLPPVAALCSEASPLIVSSS*AMAATA 200
AS P +A S S SSS + +A++
Sbjct: 465 ASSSPSSSAASSSPSSSAASSSPSSSASS 493
EST assemble image
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|
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|
clone |
accession |
position |
1 |
LC003b08_r |
AV619057 |
1 |
531 |
2 |
LCL050e12_r |
AV629027 |
3 |
454 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute