KCC002752A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002752A_C01 KCC002752A_c01
ggCAACCCTGCATTGTGCTTTGTTTCGTGGCGATACCCTCTCGGTTGAGATTTCGGGTGC
GCTTGCTCGTTTCACAATCTTCTGTACATTTTAAAGCAATTAGTTGTTCCTCCTGGTAGT
GTTAAGTCTTTGATTGCATTTAGGTTTCGCAAACCTTGCTCGTTGGCCAGTAGCCGCCCG
GCGAGCCTCCGGGTGGCCAGGCCGTAGCTGCCATGGCTCAGGAGGATGATACGATGAGAG
GTGAGGCTTCAGAGCAGAGAGCAGCGACAGGCGGTAATGGAGATGCCGCCCGGCCAGTCA
AGCGGTATCGGCGGGACGAGCTCGACAAGGAAGAAGAGAACCCGATGCTGCTTTCGGAGG
ACGGTGACGATGAGGGGCAGGAGTATGTGCCACTGCGCAAGCGGAGGGAGGCGGAGGAGT
CCCGGCTGGTCGCGCTGCTGCGGGGTGGGCGGCGGGCGGGCAGCGCGGAGCCTGACAACG
GCGGGCGGGCCGGCAGTGAGCCGCCTGGCGACCGGCCCAAGGAGTCGCTGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002752A_C01 KCC002752A_c01
         (531 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB39741.1| membrane-type mosaic serine protease [Homo sapiens]    49  5e-05
gb|AAO38062.1| transmembrane protease serine 6 [Homo sapiens]          49  5e-05
dbj|BAB55376.1| unnamed protein product [Homo sapiens]                 48  9e-05
ref|NP_114435.1| mosaic serine protease [Homo sapiens] gi|134299...    47  1e-04
sp|P14328|SP96_DICDI Spore coat protein SP96 gi|84145|pir||S0763...    47  2e-04

>dbj|BAB39741.1| membrane-type mosaic serine protease [Homo sapiens]
          Length = 581

 Score = 48.5 bits (114), Expect = 5e-05
 Identities = 32/77 (41%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = -1

Query: 531 AATPWAGRQAAHCRPARRCQAPRCPPAAHPAAARPAGTPP---PPSACAVAHTPAPHRHR 361
           A TP AG   A   PA        P  A PA A PAGTPP    P+  + A TP P R  
Sbjct: 12  ARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTP-PGRAS 70

Query: 360 PPKAASGSLLPCRARPA 310
           P +A+     P RA PA
Sbjct: 71  PGRASPAQASPARASPA 87

>gb|AAO38062.1| transmembrane protease serine 6 [Homo sapiens]
          Length = 558

 Score = 48.5 bits (114), Expect = 5e-05
 Identities = 32/77 (41%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = -1

Query: 531 AATPWAGRQAAHCRPARRCQAPRCPPAAHPAAARPAGTPP---PPSACAVAHTPAPHRHR 361
           A TP AG   A   PA        P  A PA A PAGTPP    P+  + A TP P R  
Sbjct: 12  ARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTP-PGRAS 70

Query: 360 PPKAASGSLLPCRARPA 310
           P +A+     P RA PA
Sbjct: 71  PGRASPAQASPARASPA 87

>dbj|BAB55376.1| unnamed protein product [Homo sapiens]
          Length = 491

 Score = 47.8 bits (112), Expect = 9e-05
 Identities = 32/81 (39%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
 Frame = -1

Query: 531 AATPWAGRQAAHCRPARRCQAPRCPPAAHPAAARPAGTPP---PPSACAVAHTP----AP 373
           A TP AG   A   PA        P  A PA A PAGTPP    P+  + A TP    +P
Sbjct: 12  ARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASP 71

Query: 372 HRHRPPKAASGSLLPCRARPA 310
            R  P +A+     P RA PA
Sbjct: 72  GRASPAQASPAQASPARASPA 92

>ref|NP_114435.1| mosaic serine protease [Homo sapiens] gi|13429972|dbj|BAB39742.1|
           mosaic serine protease [Homo sapiens]
          Length = 537

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 31/80 (38%), Positives = 37/80 (45%), Gaps = 3/80 (3%)
 Frame = -1

Query: 531 AATPWAGRQAAHCRPARRCQAPRCPPAAHPAAARPAGTPP---PPSACAVAHTPAPHRHR 361
           A TP AG   A   PA        P  A PA A PAGTPP    P+  + A TP P R  
Sbjct: 12  ARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTP-PGRAS 70

Query: 360 PPKAASGSLLPCRARPADTA 301
           P +A+     P +A PA  +
Sbjct: 71  PGRASPAQASPAQASPAQAS 90

 Score = 31.2 bits (69), Expect = 8.7
 Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
 Frame = -3

Query: 511 SPGGSLPARPPLSGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSS 332
           S G + PAR P +G++ PA+  P  +   R S A             +SP+  S  G   
Sbjct: 5   SHGNASPARTPSAGAS-PAQASPAGTPPGRASPAQ------------ASPAQASPAGTPP 51

Query: 331 SLSSSSRRYRLTGRAASPL--PPVAALCSEASPLIVSSS*AMAATAWPPGGSP 179
             +S ++        ASP   PP  A    ASP   S + A  A A P   SP
Sbjct: 52  GRASPAQ--------ASPAGTPPGRASPGRASPAQASPAQASPAQASPARASP 96

>sp|P14328|SP96_DICDI Spore coat protein SP96 gi|84145|pir||S07638 spore coat protein
           SP96 precursor - slime mold  (Dictyostelium discoideum)
           gi|295736|emb|CAA34508.1| spore coat protein sp96
           [Dictyostelium discoideum]
          Length = 600

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 39/103 (37%), Positives = 49/103 (46%)
 Frame = -3

Query: 511 SPGGSLPARPPLSGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSS 332
           S  GS       SGS+  A   P SSA S   S+S    S + S  SSSPSS +S   S 
Sbjct: 439 SASGSSAVSSSASGSSA-ASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSP 497

Query: 331 SLSSSSRRYRLTGRAASPLPPVAALCSEASPLIVSSS*AMAAT 203
           S S+SS     +  ++S  P  +A  S AS    SS+   AAT
Sbjct: 498 SSSASSSSAPSSSASSSSAPSSSASSSSASSSSASSAATTAAT 540

 Score = 37.4 bits (85), Expect = 0.12
 Identities = 33/90 (36%), Positives = 43/90 (47%)
 Frame = -3

Query: 529 SDSLGRSPGGSLPARPPLSGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSES 350
           S +   SP  S  +  P S +A  +   P SSA+S  S +S    S   S  +SS S+ S
Sbjct: 462 SSAASSSPSSSAASSSPSSSAASSS---PSSSASSSSSPSSSASSSSAPSSSASSSSAPS 518

Query: 349 SIGFSSSLSSSSRRYRLTGRAASPLPPVAA 260
           S   SSS SSSS     T  AA+ +   AA
Sbjct: 519 SSASSSSASSSSASSAAT-TAATTIATTAA 547

 Score = 34.3 bits (77), Expect = 1.0
 Identities = 32/100 (32%), Positives = 47/100 (47%)
 Frame = -3

Query: 499 SLPARPPLSGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSSSLSS 320
           SLP     +GS   +     +S +S   S+++   +   S  SSSPSS      SSS SS
Sbjct: 415 SLPRPTTTTGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSS---AASSSPSS 471

Query: 319 SSRRYRLTGRAASPLPPVAALCSEASPLIVSSS*AMAATA 200
           S+     +  AAS  P  +A  S +     SSS A +++A
Sbjct: 472 SAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSA 511

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
 Frame = -3

Query: 529 SDSLGRSPGGSLPARPPLSGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSS-PSSE 353
           S +   SP  S  +  P S +A  +  P  S+A+S  SS++    S + S  SSS PSS 
Sbjct: 453 SSAASSSPSSSAASSSPSSSAA--SSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSS 510

Query: 352 SSIGFSSSLSSSSRRYRLTGRAASPLPPVAALCSEASPLIVSSS*AMAAT 203
           +S   + S S+SS     +  +++       + + A+    +++   A T
Sbjct: 511 ASSSSAPSSSASSSSASSSSASSAATTAATTIATTAATTTATTTATTATT 560

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
 Frame = -3

Query: 475 SGSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSSSLSS--SSRRYR 302
           SGS+  +     SSA S   S+S    S + S  SSSPSS      SSS SS  SS    
Sbjct: 441 SGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSS---AASSSPSSSASSSSSP 497

Query: 301 LTGRAASPLPPVAALCSEASPLIVSSS*AMAATA 200
            +  ++S  P  +A  S A     SSS A +++A
Sbjct: 498 SSSASSSSAPSSSASSSSAPSSSASSSSASSSSA 531

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 27/84 (32%), Positives = 42/84 (49%)
 Frame = -3

Query: 472 GSALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSSSLSSSSRRYRLTG 293
           GS   +     S+ +S  S +S    S + S  SSSPSS ++   SSS SSS+     + 
Sbjct: 433 GSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAA---SSSPSSSAASSSPSS 489

Query: 292 RAASPLPPVAALCSEASPLIVSSS 221
            A+S   P ++  S ++P   +SS
Sbjct: 490 SASSSSSPSSSASSSSAPSSSASS 513

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 30/89 (33%), Positives = 44/89 (48%)
 Frame = -3

Query: 466 ALPARRPPRSSATSRDSSASLRLRSGTYSCPSSSPSSESSIGFSSSLSSSSRRYRLTGRA 287
           A+   RP  ++ ++ DSSA   L S + S  S S +  SS   SS+ SSS      +  A
Sbjct: 413 AVSLPRPTTTTGSTSDSSA---LGSTSESSASGSSAVSSSASGSSAASSSP-----SSSA 464

Query: 286 ASPLPPVAALCSEASPLIVSSS*AMAATA 200
           AS  P  +A  S  S    SSS + +A++
Sbjct: 465 ASSSPSSSAASSSPSSSAASSSPSSSASS 493



EST assemble image


clone accession position
1 LC003b08_r AV619057 1 531
2 LCL050e12_r AV629027 3 454




Chlamydomonas reinhardtii
Kazusa DNA Research Institute