Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002751A_C01 KCC002751A_c01
(594 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_045296.1| 64 [Equine herpesvirus 4] gi|9629809|ref|NP_045... 35 1.0
emb|CAA69956.1| ranbp3-a [Homo sapiens] 33 2.3
pir||T08778 hypothetical protein DKFZp586I1520.1 - human (fragme... 33 2.3
ref|NP_003615.1| RAN binding protein 3 isoform RANBP3-a; RAN-bin... 33 2.3
gb|AAC14485.1| F23487_2 [Homo sapiens] 33 2.3
>ref|NP_045296.1| 64 [Equine herpesvirus 4] gi|9629809|ref|NP_045281.1| 64 [Equine
herpesvirus 4] gi|11278196|pir||T42607 transcription
activator - equine herpesvirus 4 (strain NS80567)
gi|2606011|gb|AAC59583.1| 64 [Equine herpesvirus 4]
gi|2606027|gb|AAC59599.1| 64 [Equine herpesvirus 4]
Length = 1442
Score = 34.7 bits (78), Expect = 1.0
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = -3
Query: 559 PMKLPTLSLSSGIE--LPTLPAGYADV--TSQAPGLGDCRRMPCKQPDGCPSIITTPPAS 392
P +P + ++G E LP D+ +SQAPGLG C+R P P G P P S
Sbjct: 334 PRPIPQTAATTGAEEALPGCAWDLLDMNCSSQAPGLGTCQREPLLTPSGDPW-----PGS 388
Query: 391 D*P---CIRVGG 365
D P +R GG
Sbjct: 389 DAPPPGRVRYGG 400
>emb|CAA69956.1| ranbp3-a [Homo sapiens]
Length = 496
Score = 33.5 bits (75), Expect = 2.3
Identities = 23/77 (29%), Positives = 38/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 360 ISPPTRIHGQSDAGGV--VMIEGHPSGCLQGILLQSPRPGACDVTSA*PAGSVGSSIPDD 533
+ PPT IHGQ+ + G+ + L+ +LQ+P+P A T +G+ G S+P D
Sbjct: 73 LKPPTLIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQPKALSQTVP-SSGTNGVSLPAD 131
Query: 534 NESVGSFIGSDDEAAGW 584
G+ + + A W
Sbjct: 132 --CTGAVPAASPDTAAW 146
>pir||T08778 hypothetical protein DKFZp586I1520.1 - human (fragment)
gi|4884361|emb|CAB43293.1| hypothetical protein [Homo
sapiens]
Length = 570
Score = 33.5 bits (75), Expect = 2.3
Identities = 23/77 (29%), Positives = 38/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 360 ISPPTRIHGQSDAGGV--VMIEGHPSGCLQGILLQSPRPGACDVTSA*PAGSVGSSIPDD 533
+ PPT IHGQ+ + G+ + L+ +LQ+P+P A T +G+ G S+P D
Sbjct: 147 LKPPTLIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQPKALSQTVP-SSGTNGVSLPAD 205
Query: 534 NESVGSFIGSDDEAAGW 584
G+ + + A W
Sbjct: 206 --CTGAVPAASPDTAAW 220
>ref|NP_003615.1| RAN binding protein 3 isoform RANBP3-a; RAN-binding protein-3 [Homo
sapiens] gi|3687387|emb|CAA69957.1| ranbp3 [Homo
sapiens]
Length = 562
Score = 33.5 bits (75), Expect = 2.3
Identities = 23/77 (29%), Positives = 38/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 360 ISPPTRIHGQSDAGGV--VMIEGHPSGCLQGILLQSPRPGACDVTSA*PAGSVGSSIPDD 533
+ PPT IHGQ+ + G+ + L+ +LQ+P+P A T +G+ G S+P D
Sbjct: 144 LKPPTLIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQPKALSQTVP-SSGTNGVSLPAD 202
Query: 534 NESVGSFIGSDDEAAGW 584
G+ + + A W
Sbjct: 203 --CTGAVPAASPDTAAW 217
>gb|AAC14485.1| F23487_2 [Homo sapiens]
Length = 444
Score = 33.5 bits (75), Expect = 2.3
Identities = 23/77 (29%), Positives = 38/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 360 ISPPTRIHGQSDAGGV--VMIEGHPSGCLQGILLQSPRPGACDVTSA*PAGSVGSSIPDD 533
+ PPT IHGQ+ + G+ + L+ +LQ+P+P A T +G+ G S+P D
Sbjct: 21 LKPPTLIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQPKALSQTVP-SSGTNGVSLPAD 79
Query: 534 NESVGSFIGSDDEAAGW 584
G+ + + A W
Sbjct: 80 --CTGAVPAASPDTAAW 94
