KCC002749A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002749A_C01 KCC002749A_c01
cgggaggactgctgcgggaatgaagggactgtggcgccaggtgtgctttggtgagactgc
ccaaacacgattgtaggtgaTTGCGTACAGGGCGCATGACTTGCTAATGAGCCGGTCGGC
TGTCTTAACGGCTGACGAGGCCTGCAAGTTTCTCTTTCGAGGACTTTGGCTTGCAAGTTG
TTTACCGTGCCGTAGTGCGCGATTGTTGGCGCCCGGTTGCTCTTTGACTCATGACGTCCG
TATGTATAAGCGGATTTCAGGGATAAGCGGGTTGGGACCAATGCTTTACAGTTCTTCTGA
AAGGACTGCACGGAATGGGCTGACAGTTTGCTGGTCGGAGAGTCTATGCGGCAAGGACGT
GCAGCGCCGATGTACGGTAAGATGTATTATAGCCGCTCCATCCCGGTTACTGCACGTGCT
TGAGTGCTGTGCTGCAGTGCTGTGCCGCAGTGGGGTGTATTATATGGATTTGAGGGCCTG
GGCCAAGGAGGAATAAGTTTTGGCTAGTGTTGTCACGGAGTCTTTGGGAACCAAGAGTGT
TGCAACGCCGCACACACGGCAGCAAACTCATGAGAGCTGCGGGCAGGGATGGACGATTGC
TAGGGAGTGCGCACTTACATATACACACACGCAACACACACACGGACGGAGGCCAGGCCA
CCCGCCCGACCGACCCCATGCCGGTGTACATGGCCTGAGCTGGCACGCAGTTGTGCGGTT
GGTGGGGAGTGCGGCCATGCTGAAACGCACCCAACACGCGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002749A_C01 KCC002749A_c01
         (761 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P01399|TXWB_NAJHA Weak toxin CM-13b gi|69431|pir||V6NJ3E veno...    36  0.58
sp|P25680|TXW0_NAJNI Weak toxin CM-10                                  35  0.99
gb|AAO27562.1| envelope glycoprotein gpUL73 [human herpesvirus 5]      35  1.3
gb|AAG23514.1| structural glycoprotein gpUL73 [human herpesvirus...    35  1.3
dbj|BAC86651.1| unnamed protein product [Homo sapiens]                 35  1.3

>sp|P01399|TXWB_NAJHA Weak toxin CM-13b gi|69431|pir||V6NJ3E venom protein CM-13b - cobra
           (Naja haje annulifera) gi|229548|prf||754241A toxin
           CM13b
          Length = 65

 Score = 36.2 bits (82), Expect = 0.58
 Identities = 19/60 (31%), Positives = 27/60 (44%), Gaps = 4/60 (6%)
 Frame = +2

Query: 278 PMLYSSSERTARNGLTVCW----SESLCGKDVQRRCTVRCIIAAPSRLLHVLECCAAVLC 445
           P +Y +   T RNG  +C+       L GK   R C   C +A P     ++ECC+   C
Sbjct: 7   PEVYCNRFHTCRNGEKICFKRFNERKLLGKRYTRGCAATCPVAKPR---EIVECCSTDRC 63

>sp|P25680|TXW0_NAJNI Weak toxin CM-10
          Length = 65

 Score = 35.4 bits (80), Expect = 0.99
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +2

Query: 278 PMLYSSSERTARNGLTVCW----SESLCGKDVQRRCTVRCIIAAPSRLLHVLECCAAVLC 445
           P ++  +  T RNG  +C+       L GK   R C V C +A P     ++ECC+   C
Sbjct: 7   PEVFCRNFHTCRNGEKICFKRFDQRKLLGKRYTRGCAVTCPVAKPR---EIVECCSTDGC 63

>gb|AAO27562.1| envelope glycoprotein gpUL73 [human herpesvirus 5]
          Length = 134

 Score = 35.0 bits (79), Expect = 1.3
 Identities = 24/68 (35%), Positives = 32/68 (46%), Gaps = 6/68 (8%)
 Frame = +2

Query: 497 VLASVVTESLGTKSVATPHTRQQTHESCG-QGWTIARECALTYTHTQHTHGRRPG---HP 664
           ++ SVV  S  T + +TP     TH S   +  T+A     T T T  T   +PG   H 
Sbjct: 11  LVLSVVASSNNTSTASTPRPSSSTHASTTVKATTVATTSTTTATSTSSTTSAKPGSTTHD 70

Query: 665 PD--RPHA 682
           P+  RPHA
Sbjct: 71  PNVMRPHA 78

>gb|AAG23514.1| structural glycoprotein gpUL73 [human herpesvirus 5]
           gi|10801794|gb|AAG23515.1| structural glycoprotein
           gpUL73 [human herpesvirus 5] gi|10801796|gb|AAG23516.1|
           structural glycoprotein gpUL73 [human herpesvirus 5]
           gi|10801798|gb|AAG23517.1| structural glycoprotein
           gpUL73 [human herpesvirus 5] gi|10801800|gb|AAG23518.1|
           structural glycoprotein gpUL73 [human herpesvirus 5]
           gi|10801802|gb|AAG23519.1| structural glycoprotein
           gpUL73 [human herpesvirus 5] gi|10801804|gb|AAG23520.1|
           structural glycoprotein gpUL73 [human herpesvirus 5]
           gi|18656479|gb|AAL77787.1| structural glycoprotein UL73
           [human herpesvirus 5] gi|18656481|gb|AAL77788.1|
           structural glycoprotein UL73 [human herpesvirus 5]
           gi|18656483|gb|AAL77789.1| structural glycoprotein UL73
           [human herpesvirus 5] gi|18656485|gb|AAL77790.1|
           structural glycoprotein UL73 [human herpesvirus 5]
           gi|18656487|gb|AAL77791.1| structural glycoprotein UL73
           [human herpesvirus 5] gi|18656489|gb|AAL77792.1|
           structural glycoprotein UL73 [human herpesvirus 5]
           gi|18656491|gb|AAL77793.1| structural glycoprotein UL73
           [human herpesvirus 5]
           gi|21951878|gb|AAM82385.1|AF390759_1 structural
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|21951886|gb|AAM82389.1|AF390763_1 structural
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|21951888|gb|AAM82390.1|AF390764_1 structural
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|21951902|gb|AAM82397.1|AF390771_1 structural
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|21951904|gb|AAM82398.1|AF390772_1 structural
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818208|gb|AAO24837.1|AF390798_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818212|gb|AAO24839.1|AF390800_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818218|gb|AAO24842.1|AF390803_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818226|gb|AAO24846.1|AF390807_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818228|gb|AAO24847.1|AF390808_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818230|gb|AAO24848.1|AF390809_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818234|gb|AAO24850.1|AF390811_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818256|gb|AAO24861.1|AF390822_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818260|gb|AAO24863.1|AF390824_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818268|gb|AAO24867.1|AF390828_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818278|gb|AAO24872.1|AF390833_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27818292|gb|AAO24879.1|AF390840_1 envelope
           glycoprotein gpUL73 [human herpesvirus 5]
           gi|27923291|gb|AAO27549.1| envelope glycoprotein gpUL73
           [human herpesvirus 5] gi|27923313|gb|AAO27560.1|
           envelope glycoprotein gpUL73 [human herpesvirus 5]
           gi|27923321|gb|AAO27564.1| envelope glycoprotein gpUL73
           [human herpesvirus 5] gi|28076649|gb|AAO31531.1|
           envelope glycoprotein gpUL73 [human herpesvirus 5]
           gi|28076657|gb|AAO31535.1| envelope glycoprotein gpUL73
           [human herpesvirus 5]
          Length = 135

 Score = 35.0 bits (79), Expect = 1.3
 Identities = 24/68 (35%), Positives = 32/68 (46%), Gaps = 6/68 (8%)
 Frame = +2

Query: 497 VLASVVTESLGTKSVATPHTRQQTHESCG-QGWTIARECALTYTHTQHTHGRRPG---HP 664
           ++ SVV  S  T + +TP     TH S   +  T+A     T T T  T   +PG   H 
Sbjct: 11  LVLSVVASSNNTSTASTPRPSSSTHASTTVKATTVATTSTTTATSTSSTTSAKPGSTTHD 70

Query: 665 PD--RPHA 682
           P+  RPHA
Sbjct: 71  PNVMRPHA 78

>dbj|BAC86651.1| unnamed protein product [Homo sapiens]
          Length = 183

 Score = 35.0 bits (79), Expect = 1.3
 Identities = 27/71 (38%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
 Frame = -3

Query: 663 GWPGLRPCV-----CCVCVYVSAHSLAIVHP-CPQLS*VCCRV-CGVATLLVPKDSVTTL 505
           GWPGLR C+     CC  V  S+ SL  + P C   S   C + CG A L  P  SV   
Sbjct: 42  GWPGLRTCLPDSAPCCRAVTPSSQSLGPLRPLCASCSQPGCSISCGTAAL--PTQSVVPP 99

Query: 504 AKTYSSLAQAL 472
                SL   L
Sbjct: 100 PSPLLSLPPTL 110



EST assemble image


clone accession position
1 LC028f01_r AV620917 1 487
2 MX230h03_r BP090909 218 506
3 LC003a08_r AV619046 236 762




Chlamydomonas reinhardtii
Kazusa DNA Research Institute