Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002748A_C01 KCC002748A_c01
(814 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195274.1| ribosomal protein L11p family [Arabidopsis thal... 149 7e-35
dbj|BAB69029.1| mitochondrial ribosomal protein L11 [Triticum ae... 142 8e-33
gb|AAK27825.1|AC022457_28 putative ribosomal protein L11 [Oryza ... 140 3e-32
ref|XP_323689.1| hypothetical protein [Neurospora crassa] gi|289... 133 4e-30
ref|NP_524351.1| mitochondrial ribosomal protein L11 CG3351-PA [... 131 1e-29
>ref|NP_195274.1| ribosomal protein L11p family [Arabidopsis thaliana]
gi|7488304|pir||T41746 ribosomal protein L11 homolog -
Arabidopsis thaliana gi|5830791|emb|CAB54877.1|
ribosomal protein L11 homolog [Arabidopsis thaliana]
gi|7270500|emb|CAB80265.1| ribosomal protein L11 homolog
[Arabidopsis thaliana] gi|21618064|gb|AAM67114.1|
ribosomal protein L11-like protein [Arabidopsis
thaliana]
Length = 155
Score = 149 bits (375), Expect = 7e-35
Identities = 74/148 (50%), Positives = 103/148 (69%), Gaps = 2/148 (1%)
Frame = +1
Query: 136 AAKPSGPRTLVNTIKLLVNAGAAKPAPPVGPALGQAGLNIMAFCKEFNAKTANYKEGTLL 315
AAK R + TI+L V AG A+PAPPVGPALGQ LN+MAFCK+FNA+T YK T +
Sbjct: 4 AAKEILRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPM 63
Query: 316 RVKVRVFSDKSYEWDLKTPPSTWLIKKAAGLARAADRPGHELSGTVSLKHLYEIARVKQR 495
V + F D S+E+ +K+P +W IKKAAG+ + + RPGH T+S++H+YEIA+VKQ
Sbjct: 64 AVTITAFKDNSFEFTVKSPTVSWYIKKAAGVDKGSTRPGHLSVTTLSVRHVYEIAKVKQT 123
Query: 496 D--TPNLPLQSIVTALLSTCRSMGVRVV 573
D +PL+SI +++ T SMG+++V
Sbjct: 124 DPFCQYMPLESICKSIIGTANSMGIKIV 151
>dbj|BAB69029.1| mitochondrial ribosomal protein L11 [Triticum aestivum]
Length = 154
Score = 142 bits (357), Expect = 8e-33
Identities = 65/141 (46%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
Frame = +1
Query: 157 RTLVNTIKLLVNAGAAKPAPPVGPALGQAGLNIMAFCKEFNAKTANYKEGTLLRVKVRVF 336
+ ++ TI+LLV AGAA+PAPPVGPALG LN+MAFCK+FNA+T YK T ++V + +
Sbjct: 11 KPILATIRLLVPAGAARPAPPVGPALGFYRLNLMAFCKDFNARTQKYKAETPMQVTLTAY 70
Query: 337 SDKSYEWDLKTPPSTWLIKKAAGLARAADRPGHELSGTVSLKHLYEIARVKQRD--TPNL 510
D ++E+ +K+P +W +KKAAG+ A+ RPGH + ++SL+H+YEIA++KQ D ++
Sbjct: 71 KDSTFEFVVKSPSVSWFLKKAAGVETASSRPGHNMVTSLSLRHVYEIAKLKQSDPFCKHM 130
Query: 511 PLQSIVTALLSTCRSMGVRVV 573
L+++ +++ T +SMG+ +V
Sbjct: 131 SLEALCKSIIGTAKSMGIEIV 151
>gb|AAK27825.1|AC022457_28 putative ribosomal protein L11 [Oryza sativa (japonica
cultivar-group)] gi|31432576|gb|AAP54191.1| putative
ribosomal protein L11 [Oryza sativa (japonica
cultivar-group)]
Length = 155
Score = 140 bits (352), Expect = 3e-32
Identities = 64/141 (45%), Positives = 103/141 (72%), Gaps = 2/141 (1%)
Frame = +1
Query: 157 RTLVNTIKLLVNAGAAKPAPPVGPALGQAGLNIMAFCKEFNAKTANYKEGTLLRVKVRVF 336
+ ++ TI+L+V AGAA+PAPPVGPALG LN+MAFCK+FNA+T YK T ++V + +
Sbjct: 12 KPVLATIRLIVPAGAARPAPPVGPALGFYRLNLMAFCKDFNARTQKYKAETPMQVTLTAY 71
Query: 337 SDKSYEWDLKTPPSTWLIKKAAGLARAADRPGHELSGTVSLKHLYEIARVKQRD--TPNL 510
D ++E+ +K+P +W +KKAAG+ A+ RPGH + ++SL+H+YEIA++KQ D ++
Sbjct: 72 KDSTFEFVVKSPSVSWFLKKAAGIETASGRPGHTVVSSLSLRHVYEIAKLKQSDPYCKHM 131
Query: 511 PLQSIVTALLSTCRSMGVRVV 573
L+++ +++ T SMG+ +V
Sbjct: 132 SLEALCKSIIGTANSMGIEIV 152
>ref|XP_323689.1| hypothetical protein [Neurospora crassa] gi|28917376|gb|EAA27081.1|
hypothetical protein [Neurospora crassa]
Length = 158
Score = 133 bits (334), Expect = 4e-30
Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Frame = +1
Query: 139 AKPSGPRTLVNTIKLLVNAGAAKPAPPVGPALGQAGLNIMAFCKEFNAKTANYKEGTLLR 318
A G + +KL+V AG A P+PPVGPALG G+ M FCKEFNA+TA+ GT +
Sbjct: 4 AAKGGAGGVEQVVKLIVGAGQASPSPPVGPALGSKGIKSMDFCKEFNARTAHINTGTPMP 63
Query: 319 VKVRVFSDKSYEWDLKTPPSTWLIKKAA-------GLARAADRPGHELSGTVSLKHLYEI 477
V+V V D+S+ +D++TP ++WL+ AA G + A PG E+ GTVSLKH+YEI
Sbjct: 64 VRVTVRPDRSFHFDVRTPHTSWLLLNAAEAPIGKGGKRKGASNPGKEVVGTVSLKHVYEI 123
Query: 478 ARVKQRD--TPNLPLQSIVTALLSTCRSMGVRVV 573
A++KQ + LPL+ + A++ RS+G+ V+
Sbjct: 124 AKIKQSELRLSGLPLEGLCRAVIYQARSIGINVI 157
>ref|NP_524351.1| mitochondrial ribosomal protein L11 CG3351-PA [Drosophila
melanogaster] gi|22001929|sp|Q9VFJ2|RM11_DROME 60S
ribosomal protein L11, mitochondrial precursor
gi|7299888|gb|AAF55063.1| CG3351-PA [Drosophila
melanogaster] gi|20151771|gb|AAM11245.1| RE67638p
[Drosophila melanogaster]
Length = 196
Score = 131 bits (329), Expect = 1e-29
Identities = 66/146 (45%), Positives = 95/146 (64%), Gaps = 2/146 (1%)
Frame = +1
Query: 160 TLVNTIKLLVNAGAAKPAPPVGPALGQAGLNIMAFCKEFNAKTANYKEGTLLRVKVRVFS 339
T + +K + AG A PP+GP LGQ +NI AFCK+FNAKTA KEG L ++ V S
Sbjct: 19 THTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNS 78
Query: 340 DKSYEWDLKTPPSTWLIKKAAGLARAADRPGHELSGTVSLKHLYEIARVKQRDTPN--LP 513
D+SY+ + PP+T+ +K+AAG+ R PG E++G ++LKHLYEIA +K +D PN L
Sbjct: 79 DRSYDLAIHHPPATFFLKQAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNVLLT 138
Query: 514 LQSIVTALLSTCRSMGVRVVARPEEA 591
+Q + L+S R+ G++VV + A
Sbjct: 139 MQQMCEMLISIARTCGIKVVREIDPA 164
