Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002743A_C03 KCC002743A_c03
(712 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T46916 hypothetical protein DKFZp762E117.1 - human (fragmen... 40 0.027
ref|NP_061830.2| SH3-domain binding protein 1 [Homo sapiens] gi|... 40 0.027
sp|Q9Y3L3|3BP1_HUMAN SH3-domain binding protein 1 (3BP-1) 40 0.027
ref|NP_736819.1| putative DNA polymerase III gamma subunit [Cory... 38 0.14
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 37 0.23
>pir||T46916 hypothetical protein DKFZp762E117.1 - human (fragment)
gi|7018521|emb|CAB75671.1| hypothetical protein [Homo
sapiens]
Length = 346
Score = 40.4 bits (93), Expect = 0.027
Identities = 52/193 (26%), Positives = 70/193 (35%), Gaps = 15/193 (7%)
Frame = +3
Query: 69 INFNILGGQGNGGACAPAATAWQEAYTTSLAEHPSPCICVLMFPRSRNVKGL*RGPAPCP 248
INFN+ G +A Q+ + LA P V P + PAP P
Sbjct: 118 INFNVSG--------LFSAVTLQDTVSDRLASEELPSTAVPT-PATTPAPAPAPAPAPAP 168
Query: 249 LRPCAIPG*AATASNVPPDTDTARSYCSKPGWHGWI------LARAGPARRTTPPAD-SY 407
A T S VPP + + S P + R PAR T PP S
Sbjct: 169 ALASAATK-ERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSG 227
Query: 408 ARIAPPVPP--------GSPS*HPVQVTLSPMRSVMGRPTLEEAEDRAARGAVGRKPTRE 563
+R +PP PP G+P P ++ S +R+ P L + AR R P
Sbjct: 228 SRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASP 287
Query: 564 NPDTNSDPSLCPV 602
+P + S PV
Sbjct: 288 SPASPGPASPSPV 300
>ref|NP_061830.2| SH3-domain binding protein 1 [Homo sapiens]
gi|14249821|gb|AAH08282.1| SH3-domain binding protein 1
[Homo sapiens]
Length = 621
Score = 40.4 bits (93), Expect = 0.027
Identities = 52/193 (26%), Positives = 70/193 (35%), Gaps = 15/193 (7%)
Frame = +3
Query: 69 INFNILGGQGNGGACAPAATAWQEAYTTSLAEHPSPCICVLMFPRSRNVKGL*RGPAPCP 248
INFN+ G +A Q+ + LA P V P + PAP P
Sbjct: 393 INFNVSG--------LFSAVTLQDTVSDRLASEELPSTAVPT-PATTPAPAPAPAPAPAP 443
Query: 249 LRPCAIPG*AATASNVPPDTDTARSYCSKPGWHGWI------LARAGPARRTTPPAD-SY 407
A T S VPP + + S P + R PAR T PP S
Sbjct: 444 ALASAATK-ERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSG 502
Query: 408 ARIAPPVPP--------GSPS*HPVQVTLSPMRSVMGRPTLEEAEDRAARGAVGRKPTRE 563
+R +PP PP G+P P ++ S +R+ P L + AR R P
Sbjct: 503 SRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASP 562
Query: 564 NPDTNSDPSLCPV 602
+P + S PV
Sbjct: 563 SPASPGPASPSPV 575
>sp|Q9Y3L3|3BP1_HUMAN SH3-domain binding protein 1 (3BP-1)
Length = 622
Score = 40.4 bits (93), Expect = 0.027
Identities = 52/193 (26%), Positives = 70/193 (35%), Gaps = 15/193 (7%)
Frame = +3
Query: 69 INFNILGGQGNGGACAPAATAWQEAYTTSLAEHPSPCICVLMFPRSRNVKGL*RGPAPCP 248
INFN+ G +A Q+ + LA P V P + PAP P
Sbjct: 394 INFNVSG--------LFSAVTLQDTVSDRLASEELPSTAVPT-PATTPAPAPAPAPAPAP 444
Query: 249 LRPCAIPG*AATASNVPPDTDTARSYCSKPGWHGWI------LARAGPARRTTPPAD-SY 407
A T S VPP + + S P + R PAR T PP S
Sbjct: 445 ALASAATK-ERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSG 503
Query: 408 ARIAPPVPP--------GSPS*HPVQVTLSPMRSVMGRPTLEEAEDRAARGAVGRKPTRE 563
+R +PP PP G+P P ++ S +R+ P L + AR R P
Sbjct: 504 SRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASP 563
Query: 564 NPDTNSDPSLCPV 602
+P + S PV
Sbjct: 564 SPASPGPASPSPV 576
>ref|NP_736819.1| putative DNA polymerase III gamma subunit [Corynebacterium efficiens
YS-314] gi|23492044|dbj|BAC17019.1| putative DNA
polymerase III gamma subunit [Corynebacterium efficiens
YS-314]
Length = 780
Score = 38.1 bits (87), Expect = 0.14
Identities = 48/178 (26%), Positives = 65/178 (35%), Gaps = 14/178 (7%)
Frame = +1
Query: 124 RQLGRRLTLPLLPSTPAHVFAYSCFRGQGMSRDFNEVRPPVH*GLAQFLARRQLHPMCRQ 303
R+LG RL + + T ++ Q +N RP AQ Q RQ
Sbjct: 534 RELGTRLAVECVVGTDPSAVGFTT-TSQPEQPTWNPTRPTPQEQSAQQQMPSQPQES-RQ 591
Query: 304 IPIPPAVTA--------RSRVGMGGYWPEPGLHGARRRPRIPTPESHLPFPQVPPADTRC 459
P PA A S G W EP G + P P P PPA T
Sbjct: 592 HPKAPAPAAAPDEPEEPESPAPRSGGWGEPVKIGDEQ----PVAPPAAPTPVTPPAPTPR 647
Query: 460 K*P*AQCDLSWEDRPWKKLKTEQHEGRSGANRRAKTLTP------IPIPPSAQFGVLP 615
P A+ LSW +R EQ + A+R+A+ T +P+PP + +P
Sbjct: 648 PRPEAESKLSWRER------AEQAAANATAHRQAQQGTSAPFSGGVPLPPEPEDYPIP 699
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 37.4 bits (85), Expect = 0.23
Identities = 52/170 (30%), Positives = 61/170 (35%), Gaps = 10/170 (5%)
Frame = +3
Query: 120 AATAWQEAYTTSLAEHPSPCICVLMFPRSRNVKGL*RGP-------AP--CPLRPCAIPG 272
A TA Q A T S A+ SP + P+ G + P AP P RP A P
Sbjct: 13 ALTAMQLANTASHAQGASPLVVAQAQPQETGPDGKPKQPPKGPPGAAPPAAPARPAAPPP 72
Query: 273 *AATASNVPPDTDTARSYCSKPGWHGWILARAGPARRTTPPADSYARIAPPVPPGSPS*H 452
AA PP A + P PA PP AR APP PP P+
Sbjct: 73 AAA-----PPHPPAAPPPAAAP---------PRPAAPPPPPPPPAARPAPPPPPPPPA-A 117
Query: 453 PVQVTLSPMRSVMGR-PTLEEAEDRAARGAVGRKPTRENPDTNSDPSLCP 599
P Q + P + PT AAR A PT P + P P
Sbjct: 118 PKQPSPPPAAAPQQHAPTPPPPAPPAARPA----PTPPAPPPAAAPQHAP 163
