Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002736A_C02 KCC002736A_c02
(683 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_164527.2| hypothetical protein XP_164527 [Mus musculus] 39 0.073
ref|NP_005799.1| small CTD phosphatase 3 [Homo sapiens] gi|17865... 37 0.21
ref|NP_647902.1| CG15021-PA [Drosophila melanogaster] gi|1794538... 37 0.21
pir||JC5707 HYA22 protein - human 37 0.21
ref|NP_497784.1| sterile alpha motif SAM and TIR domain containi... 37 0.36
>ref|XP_164527.2| hypothetical protein XP_164527 [Mus musculus]
Length = 531
Score = 38.9 bits (89), Expect = 0.073
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -2
Query: 679 QLGERRPSPTMPAHRSCQSEG*ARGTSQARHTLCGVWASSSPRTTNGARCTTTAAKPQRS 500
Q GE++ SPT PA + G S+ R + G W R TN R +T Q
Sbjct: 330 QCGEQKASPTAPAKEALWPPGLCLPPSETRREMNGKWNQQLSRLTNNKRWKSTGDADQEL 389
Query: 499 PER 491
P+R
Sbjct: 390 PDR 392
>ref|NP_005799.1| small CTD phosphatase 3 [Homo sapiens]
gi|17865502|sp|O15194|NIF1_HUMAN Nuclear LIM
interactor-interacting factor 1 (NLI-interacting factor
1) (NIF-like protein) (YA22 protein) (HYA22)
gi|2289786|dbj|BAA21667.1| HYA22 [Homo sapiens]
Length = 340
Score = 37.4 bits (85), Expect = 0.21
Identities = 28/78 (35%), Positives = 31/78 (38%)
Frame = -3
Query: 663 GPAPPCPRTGAASRRGRRAAPHKQGTRSAECGRPVHHEPQTEPDAPPLQQNRSVPLNGRP 484
GP PP P GA GRRA P + C RP P+ APP GRP
Sbjct: 21 GPGPPLPERGA----GRRARP------GSGCERPPAPRPRAPRAAPPRAWLAGGRACGRP 70
Query: 483 PVILR*HC*ALEPLDGPA 430
P P+DGPA
Sbjct: 71 P--------RRAPMDGPA 80
>ref|NP_647902.1| CG15021-PA [Drosophila melanogaster] gi|17945382|gb|AAL48746.1|
RE17165p [Drosophila melanogaster]
gi|23093008|gb|AAF47902.2| CG15021-PA [Drosophila
melanogaster]
Length = 420
Score = 37.4 bits (85), Expect = 0.21
Identities = 33/90 (36%), Positives = 36/90 (39%), Gaps = 2/90 (2%)
Frame = -3
Query: 663 GPAP--PCPRTGAASRRGRRAAPHKQGTRSAECGRPVHHEPQTEPDAPPLQQNRSVPLNG 490
GPAP P P G R P Q T A RP + PQT+P PP Q S P
Sbjct: 58 GPAPSAPAPSYGPPQTRPPPPPPPPQPTPPAP--RPSYGPPQTQPPRPPPQPTPSAP--- 112
Query: 489 RPPVILR*HC*ALEPLDGPAR*PF**PPRP 400
PP P GP + P PPRP
Sbjct: 113 APP----------PPSYGPPQTP---PPRP 129
Score = 35.8 bits (81), Expect = 0.62
Identities = 30/88 (34%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = -3
Query: 660 PAPPCPRTGAASRRGRRAAPHKQGTRSAECGRPVHH-EPQTEPDAPPLQQNRSVPLNGRP 484
P PP PR + + P Q T SA P + PQT P PP Q S P P
Sbjct: 84 PTPPAPRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPSAP---AP 140
Query: 483 PVILR*HC*ALEPLDGPAR*PF**PPRP 400
P P GP + P PPRP
Sbjct: 141 P-----------PSYGPPQTP---PPRP 154
Score = 35.0 bits (79), Expect = 1.1
Identities = 22/56 (39%), Positives = 24/56 (42%)
Frame = -3
Query: 666 AGPAPPCPRTGAASRRGRRAAPHKQGTRSAECGRPVHHEPQTEPDAPPLQQNRSVP 499
+ PAPP P G R P Q T SA P + PQT P PP Q S P
Sbjct: 110 SAPAPPPPSYGPPQTPPPRPPP--QPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAP 163
>pir||JC5707 HYA22 protein - human
Length = 338
Score = 37.4 bits (85), Expect = 0.21
Identities = 28/78 (35%), Positives = 31/78 (38%)
Frame = -3
Query: 663 GPAPPCPRTGAASRRGRRAAPHKQGTRSAECGRPVHHEPQTEPDAPPLQQNRSVPLNGRP 484
GP PP P GA GRRA P + C RP P+ APP GRP
Sbjct: 21 GPGPPLPERGA----GRRARP------GSGCERPPAPRPRAPRAAPPRAWLAGGRACGRP 70
Query: 483 PVILR*HC*ALEPLDGPA 430
P P+DGPA
Sbjct: 71 P--------RRAPMDGPA 80
>ref|NP_497784.1| sterile alpha motif SAM and TIR domain containing protein (3E960)
[Caenorhabditis elegans] gi|7498974|pir||T20817
hypothetical protein F13B10.1a - Caenorhabditis elegans
gi|3875826|emb|CAA90182.1| C. elegans TIR-1 protein
(corresponding sequence F13B10.1a) [Caenorhabditis
elegans]
Length = 930
Score = 36.6 bits (83), Expect = 0.36
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 45 ALCEGLPQSALRVSGRAKFLLG*GPALCAASAPNSAVDPPQ---KLPPNLPSSSPCPSNP 215
A C P+S L + A F L L + S P S VDPP LPP S+ PCP+ P
Sbjct: 17 ASCFRSPRSPLGRTDDAFFELDDDDDLSSPSVPGSPVDPPSISVPLPPK--SAPPCPTQP 74
Query: 216 LP 221
P
Sbjct: 75 AP 76
