Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002733A_C01 KCC002733A_c01
(467 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_294202.1| penicillin-binding protein 1 [Deinococcus radio... 43 0.002
ref|XP_049380.2| similar to KIAA0339 protein [Homo sapiens] 39 0.030
dbj|BAA20797.2| KIAA0339 protein [Homo sapiens] 39 0.030
ref|XP_327920.1| hypothetical protein [Neurospora crassa] gi|289... 38 0.051
ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens] 38 0.051
>ref|NP_294202.1| penicillin-binding protein 1 [Deinococcus radiodurans]
gi|7473266|pir||B75514 penicillin-binding protein 1 -
Deinococcus radiodurans (strain R1)
gi|6458167|gb|AAF10059.1|AE001907_5 penicillin-binding
protein 1 [Deinococcus radiodurans]
Length = 873
Score = 42.7 bits (99), Expect = 0.002
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = -2
Query: 304 SPPGVPPRKNSRRATPDR*TTSVAKPSLTTSCPRGP-NRMTRGTAGPRAVPNRTTTAPKS 128
SPP PR + R R T+ P T CP P R++R A PR + R T P
Sbjct: 779 SPPPRRPRPGATRRANRRRTS----PPSATRCPTCPRRRLSRCPATPRPLSRRPVTPPGR 834
Query: 127 ARRIARRLHHLRAALPKECGAPNPPPRTQSCSHT 26
+ RR+ LR P P+PPPR + + T
Sbjct: 835 PFQARRRIPRLRIP-PTRPRLPSPPPRPRRTAPT 867
>ref|XP_049380.2| similar to KIAA0339 protein [Homo sapiens]
Length = 1707
Score = 38.9 bits (89), Expect = 0.030
Identities = 20/65 (30%), Positives = 28/65 (42%), Gaps = 5/65 (7%)
Frame = -1
Query: 302 PAGRSAAQKFPPCYSR*IDYLGSQAVPHDVVPTR-----PKPDDTGNGGATGGPEPHHHS 138
P + A++FPP Y+ + S+ D P P+P + G GG GGP P
Sbjct: 396 PFAENTAERFPPSYTSYLPPEPSRPTDQDYRPPASEAPPPEPPEPGGGGGGGGPSPEREE 455
Query: 137 SEVSP 123
SP
Sbjct: 456 VRTSP 460
>dbj|BAA20797.2| KIAA0339 protein [Homo sapiens]
Length = 1709
Score = 38.9 bits (89), Expect = 0.030
Identities = 20/65 (30%), Positives = 28/65 (42%), Gaps = 5/65 (7%)
Frame = -1
Query: 302 PAGRSAAQKFPPCYSR*IDYLGSQAVPHDVVPTR-----PKPDDTGNGGATGGPEPHHHS 138
P + A++FPP Y+ + S+ D P P+P + G GG GGP P
Sbjct: 398 PFAENTAERFPPSYTSYLPPEPSRPTDQDYRPPASEAPPPEPPEPGGGGGGGGPSPEREE 457
Query: 137 SEVSP 123
SP
Sbjct: 458 VRTSP 462
>ref|XP_327920.1| hypothetical protein [Neurospora crassa] gi|28917834|gb|EAA27522.1|
hypothetical protein [Neurospora crassa]
Length = 623
Score = 38.1 bits (87), Expect = 0.051
Identities = 24/64 (37%), Positives = 31/64 (47%)
Frame = -3
Query: 195 TG*HGERRGHGRSRTAPPQLRSQPAALPGVCTTCAPPYLRNAVRQILLQEPRAAAIPLTQ 16
TG GE+R G S T+PP + +PA P AP +++ RQ L PR P T
Sbjct: 68 TGTAGEQREEG-SNTSPPVVDPRPAPAPAPVPAPAPGHIKLPRRQSALSAPRTPRTPRTP 126
Query: 15 RRDR 4
R R
Sbjct: 127 NRVR 130
>ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]
Length = 250
Score = 38.1 bits (87), Expect = 0.051
Identities = 33/98 (33%), Positives = 43/98 (43%)
Frame = -2
Query: 304 SPPGVPPRKNSRRATPDR*TTSVAKPSLTTSCPRGPNRMTRGTAGPRAVPNRTTTAPKSA 125
SP PP ++ R P T S A+ S R P R + G PRA P R T P+++
Sbjct: 17 SPARTPPTESPARTPP---TASPARTPPRASPARTPPRASPGRTPPRASPRR--TPPRAS 71
Query: 124 RRIARRLHHLRAALPKECGAPNPPPRTQSCSHTTHTAS 11
R A R P +P P T+S + T TAS
Sbjct: 72 PRRAPPRASPRRTPP--TASPTRTPPTESPARTPPTAS 107
Score = 37.0 bits (84), Expect = 0.11
Identities = 37/109 (33%), Positives = 45/109 (40%), Gaps = 13/109 (11%)
Frame = -2
Query: 304 SPPGVPPRKNSRRATPDR*--TTSVAKPSLTTSCPRGPNRMTRGTAGPRAVPNRT----- 146
+PP PR+ A+P R T S A+ T S R P+R + PRA P RT
Sbjct: 75 APPRASPRRTPPTASPTRTPPTESPARTPPTASPARTPSRASPRRTPPRASPTRTPPRAS 134
Query: 145 --TTAPK-SARRIARRLHHLRA---ALPKECGAPNPPPRTQSCSHTTHT 17
T P+ S RR R RA A PK P RT + T T
Sbjct: 135 PRRTPPRASPRRTPPRASPTRAPPRASPKRTPPRASPTRTPPRASPTRT 183
Score = 33.9 bits (76), Expect = 0.96
Identities = 33/101 (32%), Positives = 40/101 (38%), Gaps = 2/101 (1%)
Frame = -2
Query: 304 SPPGVPPRKNSRRATPDR*TTSVAKPSLTTSCPRGPNRMTRGTAGPRAVPNRT--TTAPK 131
SP PPR + RR TP R + + A P S R P R + PRA P RT T +P
Sbjct: 134 SPRRTPPRASPRR-TPPRASPTRAPPR--ASPKRTPPRASPTRTPPRASPTRTPPTESPA 190
Query: 130 SARRIARRLHHLRAALPKECGAPNPPPRTQSCSHTTHTASR 8
A A P+ P RT + T T R
Sbjct: 191 RTPPTASPARTPSRASPRRMPPRASPTRTPPRASPTRTPPR 231
