Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002728A_C01 KCC002728A_c01
(836 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM18228.1| R1 [Citrus reticulata] 212 5e-54
ref|NP_563877.1| SEX1 protein; nuclear gene for chloroplast prod... 204 1e-51
gb|AAF17665.1|AC009398_14 F20B24.19 [Arabidopsis thaliana] 204 1e-51
gb|AAK11735.1| starch associated protein R1 [Solanum tuberosum] 202 7e-51
pir||T07050 hypothetical protein R1 - potato gi|3287270|emb|CAA7... 199 4e-50
>gb|AAM18228.1| R1 [Citrus reticulata]
Length = 1475
Score = 212 bits (540), Expect = 5e-54
Identities = 124/280 (44%), Positives = 174/280 (61%), Gaps = 9/280 (3%)
Frame = +2
Query: 14 WYKDAGGNFTVPLPSKDKPVEDT-----RSMDVIKDELSRTIIEAEVNSSMWTLMHRFNK 178
W K+ G +F V + K V+ + + ++++ IEA+ + MHRFN
Sbjct: 537 WIKNKGSDFYVDFSYESKQVQQDFGDGKGTAKALLEKIAGLEIEAQKS-----FMHRFNI 591
Query: 179 AADLVSEVLNGYYDQLDVADAMSRIYVWLRYSATRHLTWQRNYNTQPRILSAAQERLTNT 358
AADL+ E +L A I VW+R+ ATR L W +NYN +PR +S AQ+RLT+
Sbjct: 592 AADLIQEAKEA--GELGFAG----ILVWMRFMATRQLIWNKNYNVKPREISKAQDRLTDL 645
Query: 359 IANAHGRTTGEAQEWVRMMLTTVGRGGDG---QKIRDEILHIMHRNHIPERKGLWMEEWH 529
+ N + + E +E VRM+L+TVGRGG+G Q+IRDEIL I N+ KG MEEWH
Sbjct: 646 LQNVY-ISNPEYREIVRMILSTVGRGGEGDVGQRIRDEILVIQRNNNC---KGGMMEEWH 701
Query: 530 QKLHNNTTPDDVPICEAYLAFLEGNGNIGAYWRVLSDAGITRQRLEGFDRAITLEPEYYP 709
QKLHNNT+PDDV IC+A + +++ + +I AYW+ L+D GIT++RL +DRAI EP +
Sbjct: 702 QKLHNNTSPDDVIICQALIDYIKSDFDISAYWKTLNDNGITKERLLSYDRAIHSEPNFRR 761
Query: 710 EKRDALIRDFRNYLGILKAVHSGADL-SASASAAGNRIPG 826
+++D L+RD NY+ LKAVHSGADL SA + G R G
Sbjct: 762 DQKDGLLRDLGNYMRTLKAVHSGADLESAITNCLGYRSEG 801
>ref|NP_563877.1| SEX1 protein; nuclear gene for chloroplast product [Arabidopsis
thaliana] gi|12044358|gb|AAG47821.1|AF312027_1 SEX1
[Arabidopsis thaliana]
Length = 1399
Score = 204 bits (520), Expect = 1e-51
Identities = 118/273 (43%), Positives = 169/273 (61%), Gaps = 12/273 (4%)
Frame = +2
Query: 14 WYKDAGGNFTVPLPSKDKPVEDTRS---------MDVIKDELSRTIIEAEVNSSMWTLMH 166
W K+ +F V ++K V+ +D I D +E+E S MH
Sbjct: 464 WIKNNDSDFYVDFAKEEKHVQKDYGDGKGTAKHLLDKIAD------LESEAQKSF---MH 514
Query: 167 RFNKAADLVSEVLNGYYDQLDVADAMSRIYVWLRYSATRHLTWQRNYNTQPRILSAAQER 346
RFN AADLV E + QL A I VW+R+ ATR L W +NYN +PR +S AQ+R
Sbjct: 515 RFNIAADLVDEAKSA--GQLGFAG----ILVWMRFMATRQLVWNKNYNVKPREISKAQDR 568
Query: 347 LTNTIANAHGRTTGEAQEWVRMMLTTVGRGGDG---QKIRDEILHIMHRNHIPERKGLWM 517
LT+ + + + + E +E +RM+++TVGRGG+G Q+IRDEIL I +N + KG M
Sbjct: 569 LTDLLQDVYA-SYPEYRELLRMIMSTVGRGGEGDVGQRIRDEILVIQRKN---DCKGGIM 624
Query: 518 EEWHQKLHNNTTPDDVPICEAYLAFLEGNGNIGAYWRVLSDAGITRQRLEGFDRAITLEP 697
EEWHQKLHNNT+PDDV IC+A + +++ + ++ YW+ L+D GIT++RL +DRAI EP
Sbjct: 625 EEWHQKLHNNTSPDDVVICQALMDYIKSDFDLSVYWKTLNDNGITKERLLSYDRAIHSEP 684
Query: 698 EYYPEKRDALIRDFRNYLGILKAVHSGADLSAS 796
+ E++D L+RD +Y+ LKAVHSGADL ++
Sbjct: 685 NFRGEQKDGLLRDLGHYMRTLKAVHSGADLESA 717
>gb|AAF17665.1|AC009398_14 F20B24.19 [Arabidopsis thaliana]
Length = 1540
Score = 204 bits (520), Expect = 1e-51
Identities = 118/273 (43%), Positives = 169/273 (61%), Gaps = 12/273 (4%)
Frame = +2
Query: 14 WYKDAGGNFTVPLPSKDKPVEDTRS---------MDVIKDELSRTIIEAEVNSSMWTLMH 166
W K+ +F V ++K V+ +D I D +E+E S MH
Sbjct: 598 WIKNNDSDFYVDFAKEEKHVQKDYGDGKGTAKHLLDKIAD------LESEAQKSF---MH 648
Query: 167 RFNKAADLVSEVLNGYYDQLDVADAMSRIYVWLRYSATRHLTWQRNYNTQPRILSAAQER 346
RFN AADLV E + QL A I VW+R+ ATR L W +NYN +PR +S AQ+R
Sbjct: 649 RFNIAADLVDEAKSA--GQLGFAG----ILVWMRFMATRQLVWNKNYNVKPREISKAQDR 702
Query: 347 LTNTIANAHGRTTGEAQEWVRMMLTTVGRGGDG---QKIRDEILHIMHRNHIPERKGLWM 517
LT+ + + + + E +E +RM+++TVGRGG+G Q+IRDEIL I +N + KG M
Sbjct: 703 LTDLLQDVYA-SYPEYRELLRMIMSTVGRGGEGDVGQRIRDEILVIQRKN---DCKGGIM 758
Query: 518 EEWHQKLHNNTTPDDVPICEAYLAFLEGNGNIGAYWRVLSDAGITRQRLEGFDRAITLEP 697
EEWHQKLHNNT+PDDV IC+A + +++ + ++ YW+ L+D GIT++RL +DRAI EP
Sbjct: 759 EEWHQKLHNNTSPDDVVICQALMDYIKSDFDLSVYWKTLNDNGITKERLLSYDRAIHSEP 818
Query: 698 EYYPEKRDALIRDFRNYLGILKAVHSGADLSAS 796
+ E++D L+RD +Y+ LKAVHSGADL ++
Sbjct: 819 NFRGEQKDGLLRDLGHYMRTLKAVHSGADLESA 851
>gb|AAK11735.1| starch associated protein R1 [Solanum tuberosum]
Length = 1464
Score = 202 bits (513), Expect = 7e-51
Identities = 117/280 (41%), Positives = 176/280 (62%), Gaps = 9/280 (3%)
Frame = +2
Query: 14 WYKDAGGNFTVPLPSKDKPV-----EDTRSMDVIKDELSRTIIEAEVNSSMWTLMHRFNK 178
W K+ G +F V + K + + + + D+++ +E+E S MHRFN
Sbjct: 529 WIKNQGSDFYVDFSAASKSALKAAGDGSGTAKSLLDKIAD--MESEAQKSF---MHRFNI 583
Query: 179 AADLVSEVLNGYYDQLDVADAMSRIYVWLRYSATRHLTWQRNYNTQPRILSAAQERLTNT 358
AADL+ + + +L A I VW+R+ ATR L W +NYN +PR +S AQ+RLT+
Sbjct: 584 AADLMEDATSA--GELGFAG----ILVWMRFMATRQLIWNKNYNVKPREISKAQDRLTDL 637
Query: 359 IANAHGRTTGEAQEWVRMMLTTVGRGGDG---QKIRDEILHIMHRNHIPERKGLWMEEWH 529
+ NA + + +E +RM+++TVGRGG+G Q+IRDEIL I +N + KG MEEWH
Sbjct: 638 LQNAF-TSHPQYREILRMIMSTVGRGGEGDVGQRIRDEILVIQRKN---DCKGGMMEEWH 693
Query: 530 QKLHNNTTPDDVPICEAYLAFLEGNGNIGAYWRVLSDAGITRQRLEGFDRAITLEPEYYP 709
QKLHNNT+PDDV IC+A + +++ + ++G YW+ L++ GIT++RL +DRAI EP +
Sbjct: 694 QKLHNNTSPDDVVICQALIDYIKSDFDLGVYWKTLNENGITKERLLSYDRAIHSEPNFRG 753
Query: 710 EKRDALIRDFRNYLGILKAVHSGADL-SASASAAGNRIPG 826
+++ L+RD +Y+ LKAVHSGADL SA A+ G + G
Sbjct: 754 DQKGGLLRDLGHYMKTLKAVHSGADLESAIANCMGYKTEG 793
>pir||T07050 hypothetical protein R1 - potato gi|3287270|emb|CAA70725.1| R1
[Solanum tuberosum]
Length = 1464
Score = 199 bits (507), Expect = 4e-50
Identities = 116/280 (41%), Positives = 175/280 (62%), Gaps = 9/280 (3%)
Frame = +2
Query: 14 WYKDAGGNFTVPLPSKDKPV-----EDTRSMDVIKDELSRTIIEAEVNSSMWTLMHRFNK 178
W K+ G +F V + K + + + + D+++ +E+E S MHRFN
Sbjct: 529 WIKNQGSDFYVGFSAASKLALKAAGDGSGTAKSLLDKIAD--MESEAQKSF---MHRFNI 583
Query: 179 AADLVSEVLNGYYDQLDVADAMSRIYVWLRYSATRHLTWQRNYNTQPRILSAAQERLTNT 358
AADL+ + + +L A I VW+R+ ATR L W +NYN +PR +S AQ+RLT+
Sbjct: 584 AADLIEDATSA--GELGFAG----ILVWMRFMATRQLIWNKNYNVKPREISKAQDRLTDL 637
Query: 359 IANAHGRTTGEAQEWVRMMLTTVGRGGDG---QKIRDEILHIMHRNHIPERKGLWMEEWH 529
+ NA + + +E +RM+++TVGRGG+G Q+IRDEIL I N + KG M+EWH
Sbjct: 638 LQNAF-TSHPQYREILRMIMSTVGRGGEGDVGQRIRDEILVIQRNN---DCKGGMMQEWH 693
Query: 530 QKLHNNTTPDDVPICEAYLAFLEGNGNIGAYWRVLSDAGITRQRLEGFDRAITLEPEYYP 709
QKLHNNT+PDDV IC+A + +++ + ++G YW+ L++ GIT++RL +DRAI EP +
Sbjct: 694 QKLHNNTSPDDVVICQALIDYIKSDFDLGVYWKTLNENGITKERLLSYDRAIHSEPNFRG 753
Query: 710 EKRDALIRDFRNYLGILKAVHSGADL-SASASAAGNRIPG 826
+++ L+RD +Y+ LKAVHSGADL SA A+ G + G
Sbjct: 754 DQKGGLLRDLGHYMRTLKAVHSGADLESAIANCMGYKTEG 793
