KCC002723A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002723A_C01 KCC002723A_c01
cttcgctgttctggcactttaaaaagcctgtcatgattgtggagggcaagatgcaatatt
tattcgatgaaaaggggcgaCGCTACCTCGACGCGTTTGCGGGCATTGTGACTGTAAGCG
TGGGTCACTGCCACCCGGCCGTGAACGAGGCCATCAACAAGCAGAACGCGCTGCTCCAGC
ACACCACCACCATCTACCTCAACAACCAGATTGCGGAGTACGCCAAGGAGCTCACGGACC
GCATGCCCGGAAACCTCAAGGTGGTGTACTTTGTCAACAGTGGCAGTGAGGCCAACGACA
TGGCCATCATGCTGGCCCGCCTGTACACGGGCAACTGGGACATGCTGTGCCTGCGCAACG
CCTACCACGGCATGAGCATCGGCACCATGGGCACCTGCGGCCAGCACACCTGGAAGCAGC
CCATGCCGCAGGGCTTCGGCTACCACCACGCGTTGAACCCGGACCCCTACCGCGGCCCCT
ACGGCGACGACGGCGCGCGCTACGCGGCGGACATGGCGGACCTCATTTCTGGGGGCCACG
CCTGGGCCTGCGTGGCTGGGCTTCATCTGCGGAGACAATCCCAGGTGCGTGTGGCGGCAC
TTGTGCCCGCTGTGCGACTTGGCCTACCCTGCCCGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002723A_C01 KCC002723A_c01
         (637 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAD48837.1|AF166351_1 alanine:glyoxylate aminotransferase 2 h...   238  5e-62
ref|NP_568064.1| alanine--glyoxylate aminotransferase (beta-alan...   238  7e-62
gb|AAK76615.1| putative beta-alanine-pyruvate aminotransferase [...   214  1e-54
ref|NP_181374.1| alanine--glyoxylate aminotransferase (beta-alan...   214  1e-54
ref|NP_187498.1| alanine--glyoxylate aminotransferase (beta-alan...   211  9e-54

>gb|AAD48837.1|AF166351_1 alanine:glyoxylate aminotransferase 2 homolog [Arabidopsis
           thaliana]
          Length = 476

 Score =  238 bits (607), Expect = 5e-62
 Identities = 113/178 (63%), Positives = 141/178 (78%)
 Frame = +3

Query: 3   SLFWHFKKPVMIVEGKMQYLFDEKGRRYLDAFAGIVTVSVGHCHPAVNEAINKQNALLQH 182
           SLF +++KP+ IVEGKMQYL+DE GRRYLDAFAGIVTVS GHCHP +  AI +Q+ LLQH
Sbjct: 70  SLFHYYQKPLNIVEGKMQYLYDESGRRYLDAFAGIVTVSCGHCHPDILNAITEQSKLLQH 129

Query: 183 TTTIYLNNQIAEYAKELTDRMPGNLKVVYFVNSGSEANDMAIMLARLYTGNWDMLCLRNA 362
            TTIYL++ I ++A+ L  +MPGNLKVVYFVNSGSEAN++A+M+ARLYTG+ +M+ LRNA
Sbjct: 130 ATTIYLHHAIGDFAEALAAKMPGNLKVVYFVNSGSEANELAMMMARLYTGSLEMISLRNA 189

Query: 363 YHGMSIGTMGTCGQHTWKQPMPQGFGYHHALNPDPYRGPYGDDGARYAADMADLISGG 536
           YHG S  T+G    +TWK P+PQG   HH +NPDPYRG +G DG+ YA D+ D I  G
Sbjct: 190 YHGGSSNTIGLTALNTWKYPLPQG-EIHHVVNPDPYRGVFGSDGSLYAKDVQDHIEYG 246

>ref|NP_568064.1| alanine--glyoxylate aminotransferase (beta-alanine-pyruvate
           aminotransferase/AGT), putative [Arabidopsis thaliana]
           gi|15809992|gb|AAL06923.1| AT4g39660/T19P19_50
           [Arabidopsis thaliana] gi|25141217|gb|AAN73303.1|
           At4g39660/T19P19_50 [Arabidopsis thaliana]
          Length = 476

 Score =  238 bits (606), Expect = 7e-62
 Identities = 113/178 (63%), Positives = 141/178 (78%)
 Frame = +3

Query: 3   SLFWHFKKPVMIVEGKMQYLFDEKGRRYLDAFAGIVTVSVGHCHPAVNEAINKQNALLQH 182
           SLF +++KP+ IVEGKMQYL+DE GRRYLDAFAGIVTVS GHCHP +  AI +Q+ LLQH
Sbjct: 70  SLFHYYQKPLNIVEGKMQYLYDESGRRYLDAFAGIVTVSCGHCHPDILNAITEQSKLLQH 129

Query: 183 TTTIYLNNQIAEYAKELTDRMPGNLKVVYFVNSGSEANDMAIMLARLYTGNWDMLCLRNA 362
            TTIYL++ I ++A+ L  +MPGNLKVVYFVNSGSEAN++A+M+ARLYTG+ +M+ LRNA
Sbjct: 130 ATTIYLHHAIGDFAEALAAKMPGNLKVVYFVNSGSEANELAMMMARLYTGSLEMISLRNA 189

Query: 363 YHGMSIGTMGTCGQHTWKQPMPQGFGYHHALNPDPYRGPYGDDGARYAADMADLISGG 536
           YHG S  T+G    +TWK P+PQG   HH +NPDPYRG +G DG+ YA D+ D I  G
Sbjct: 190 YHGGSSNTIGLTALNTWKYPLPQG-EIHHVVNPDPYRGVFGSDGSLYAKDVHDHIEYG 246

>gb|AAK76615.1| putative beta-alanine-pyruvate aminotransferase [Arabidopsis
           thaliana]
          Length = 477

 Score =  214 bits (544), Expect = 1e-54
 Identities = 100/178 (56%), Positives = 131/178 (73%)
 Frame = +3

Query: 3   SLFWHFKKPVMIVEGKMQYLFDEKGRRYLDAFAGIVTVSVGHCHPAVNEAINKQNALLQH 182
           S+F  ++KP+ IV+GKMQYLFDE GRRYLDAFAGI  V+ GHCHP V E +  Q   LQH
Sbjct: 72  SMFCLYRKPLNIVDGKMQYLFDESGRRYLDAFAGIAVVNCGHCHPDVVEPVINQIKRLQH 131

Query: 183 TTTIYLNNQIAEYAKELTDRMPGNLKVVYFVNSGSEANDMAIMLARLYTGNWDMLCLRNA 362
            T +YLN+ IA++++ L  ++PG+LKVV+F NSG+EAN++A+M+A+LYTG  D++ +RN 
Sbjct: 132 PTVLYLNHAIADFSEALASKLPGDLKVVFFTNSGTEANELALMMAKLYTGCQDIVAVRNG 191

Query: 363 YHGMSIGTMGTCGQHTWKQPMPQGFGYHHALNPDPYRGPYGDDGARYAADMADLISGG 536
           YHG +  TMG  GQ  WK  + Q    HHALNPDPYRG +G DG +YA D+ DLI  G
Sbjct: 192 YHGNAAATMGATGQSMWKFNVVQN-SVHHALNPDPYRGVFGSDGEKYAKDLQDLIQYG 248

>ref|NP_181374.1| alanine--glyoxylate aminotransferase (beta-alanine-pyruvate
           aminotransferase/AGT), putative [Arabidopsis thaliana]
           gi|7434183|pir||T02505 probable beta-alanine-pyruvate
           aminotransferase At2g38400 [imported] - Arabidopsis
           thaliana gi|3395432|gb|AAC28764.1| putative
           beta-alanine-pyruvate aminotransferase [Arabidopsis
           thaliana] gi|5731261|gb|AAD48838.1|AF166352_1
           alanine:glyoxylate aminotransferase 2 homolog
           [Arabidopsis thaliana] gi|21553486|gb|AAM62579.1|
           putative beta-alanine-pyruvate aminotransferase
           [Arabidopsis thaliana] gi|25054854|gb|AAN71917.1|
           putative beta-alanine-pyruvate aminotransferase
           [Arabidopsis thaliana]
          Length = 477

 Score =  214 bits (544), Expect = 1e-54
 Identities = 100/178 (56%), Positives = 131/178 (73%)
 Frame = +3

Query: 3   SLFWHFKKPVMIVEGKMQYLFDEKGRRYLDAFAGIVTVSVGHCHPAVNEAINKQNALLQH 182
           S+F  ++KP+ IV+GKMQYLFDE GRRYLDAFAGI  V+ GHCHP V E +  Q   LQH
Sbjct: 72  SMFCLYRKPLNIVDGKMQYLFDESGRRYLDAFAGIAVVNCGHCHPDVVEPVINQIKRLQH 131

Query: 183 TTTIYLNNQIAEYAKELTDRMPGNLKVVYFVNSGSEANDMAIMLARLYTGNWDMLCLRNA 362
            T +YLN+ IA++++ L  ++PG+LKVV+F NSG+EAN++A+M+A+LYTG  D++ +RN 
Sbjct: 132 PTVLYLNHAIADFSEALASKLPGDLKVVFFTNSGTEANELALMMAKLYTGCQDIVAVRNG 191

Query: 363 YHGMSIGTMGTCGQHTWKQPMPQGFGYHHALNPDPYRGPYGDDGARYAADMADLISGG 536
           YHG +  TMG  GQ  WK  + Q    HHALNPDPYRG +G DG +YA D+ DLI  G
Sbjct: 192 YHGNAAATMGATGQSMWKFNVVQN-SVHHALNPDPYRGVFGSDGEKYAKDLQDLIQYG 248

>ref|NP_187498.1| alanine--glyoxylate aminotransferase (beta-alanine-pyruvate
           aminotransferase/AGT), putative [Arabidopsis thaliana]
           gi|6403506|gb|AAF07846.1|AC010871_22 putative
           aminotransferase [Arabidopsis thaliana]
           gi|20466700|gb|AAM20667.1| putative aminotransferase
           [Arabidopsis thaliana]
          Length = 481

 Score =  211 bits (536), Expect = 9e-54
 Identities = 99/178 (55%), Positives = 131/178 (72%)
 Frame = +3

Query: 3   SLFWHFKKPVMIVEGKMQYLFDEKGRRYLDAFAGIVTVSVGHCHPAVNEAINKQNALLQH 182
           +LF  +  P+ IVE KMQY+FDE GRRYLDAF GI TVS GHCHP V  ++ KQ  L+ H
Sbjct: 75  ALFHFYNTPLNIVEAKMQYVFDENGRRYLDAFGGIATVSCGHCHPEVVNSVVKQLKLINH 134

Query: 183 TTTIYLNNQIAEYAKELTDRMPGNLKVVYFVNSGSEANDMAIMLARLYTGNWDMLCLRNA 362
           +T +YLN+ I+++A+ L   +PG+LKVV+F NSG+EAN++A+M+ARLYTG  D++ LRN+
Sbjct: 135 STILYLNHTISDFAEALVSTLPGDLKVVFFTNSGTEANELAMMMARLYTGCNDIVSLRNS 194

Query: 363 YHGMSIGTMGTCGQHTWKQPMPQGFGYHHALNPDPYRGPYGDDGARYAADMADLISGG 536
           YHG +  TMG   Q  WK  + Q  G HHA+NPDPYRG +G DG +YA+D+ DLI  G
Sbjct: 195 YHGNAAATMGATAQSNWKFNVVQS-GVHHAINPDPYRGIFGSDGEKYASDVHDLIQFG 251



EST assemble image


clone accession position
1 HCL098b10_r AV645098 1 455
2 MX220e10_r BP090214 236 637




Chlamydomonas reinhardtii
Kazusa DNA Research Institute