KCC002723A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC002723A_C01 KCC002723A_c01
cttcgctgttctggcactttaaaaagcctgtcatgattgtggagggcaagatgcaatatt
tattcgatgaaaaggggcgaCGCTACCTCGACGCGTTTGCGGGCATTGTGACTGTAAGCG
TGGGTCACTGCCACCCGGCCGTGAACGAGGCCATCAACAAGCAGAACGCGCTGCTCCAGC
ACACCACCACCATCTACCTCAACAACCAGATTGCGGAGTACGCCAAGGAGCTCACGGACC
GCATGCCCGGAAACCTCAAGGTGGTGTACTTTGTCAACAGTGGCAGTGAGGCCAACGACA
TGGCCATCATGCTGGCCCGCCTGTACACGGGCAACTGGGACATGCTGTGCCTGCGCAACG
CCTACCACGGCATGAGCATCGGCACCATGGGCACCTGCGGCCAGCACACCTGGAAGCAGC
CCATGCCGCAGGGCTTCGGCTACCACCACGCGTTGAACCCGGACCCCTACCGCGGCCCCT
ACGGCGACGACGGCGCGCGCTACGCGGCGGACATGGCGGACCTCATTTCTGGGGGCCACG
CCTGGGCCTGCGTGGCTGGGCTTCATCTGCGGAGACAATCCCAGGTGCGTGTGGCGGCAC
TTGTGCCCGCTGTGCGACTTGGCCTACCCTGCCCGGC
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002723A_C01 KCC002723A_c01
(637 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD48837.1|AF166351_1 alanine:glyoxylate aminotransferase 2 h... 238 5e-62
ref|NP_568064.1| alanine--glyoxylate aminotransferase (beta-alan... 238 7e-62
gb|AAK76615.1| putative beta-alanine-pyruvate aminotransferase [... 214 1e-54
ref|NP_181374.1| alanine--glyoxylate aminotransferase (beta-alan... 214 1e-54
ref|NP_187498.1| alanine--glyoxylate aminotransferase (beta-alan... 211 9e-54
>gb|AAD48837.1|AF166351_1 alanine:glyoxylate aminotransferase 2 homolog [Arabidopsis
thaliana]
Length = 476
Score = 238 bits (607), Expect = 5e-62
Identities = 113/178 (63%), Positives = 141/178 (78%)
Frame = +3
Query: 3 SLFWHFKKPVMIVEGKMQYLFDEKGRRYLDAFAGIVTVSVGHCHPAVNEAINKQNALLQH 182
SLF +++KP+ IVEGKMQYL+DE GRRYLDAFAGIVTVS GHCHP + AI +Q+ LLQH
Sbjct: 70 SLFHYYQKPLNIVEGKMQYLYDESGRRYLDAFAGIVTVSCGHCHPDILNAITEQSKLLQH 129
Query: 183 TTTIYLNNQIAEYAKELTDRMPGNLKVVYFVNSGSEANDMAIMLARLYTGNWDMLCLRNA 362
TTIYL++ I ++A+ L +MPGNLKVVYFVNSGSEAN++A+M+ARLYTG+ +M+ LRNA
Sbjct: 130 ATTIYLHHAIGDFAEALAAKMPGNLKVVYFVNSGSEANELAMMMARLYTGSLEMISLRNA 189
Query: 363 YHGMSIGTMGTCGQHTWKQPMPQGFGYHHALNPDPYRGPYGDDGARYAADMADLISGG 536
YHG S T+G +TWK P+PQG HH +NPDPYRG +G DG+ YA D+ D I G
Sbjct: 190 YHGGSSNTIGLTALNTWKYPLPQG-EIHHVVNPDPYRGVFGSDGSLYAKDVQDHIEYG 246
>ref|NP_568064.1| alanine--glyoxylate aminotransferase (beta-alanine-pyruvate
aminotransferase/AGT), putative [Arabidopsis thaliana]
gi|15809992|gb|AAL06923.1| AT4g39660/T19P19_50
[Arabidopsis thaliana] gi|25141217|gb|AAN73303.1|
At4g39660/T19P19_50 [Arabidopsis thaliana]
Length = 476
Score = 238 bits (606), Expect = 7e-62
Identities = 113/178 (63%), Positives = 141/178 (78%)
Frame = +3
Query: 3 SLFWHFKKPVMIVEGKMQYLFDEKGRRYLDAFAGIVTVSVGHCHPAVNEAINKQNALLQH 182
SLF +++KP+ IVEGKMQYL+DE GRRYLDAFAGIVTVS GHCHP + AI +Q+ LLQH
Sbjct: 70 SLFHYYQKPLNIVEGKMQYLYDESGRRYLDAFAGIVTVSCGHCHPDILNAITEQSKLLQH 129
Query: 183 TTTIYLNNQIAEYAKELTDRMPGNLKVVYFVNSGSEANDMAIMLARLYTGNWDMLCLRNA 362
TTIYL++ I ++A+ L +MPGNLKVVYFVNSGSEAN++A+M+ARLYTG+ +M+ LRNA
Sbjct: 130 ATTIYLHHAIGDFAEALAAKMPGNLKVVYFVNSGSEANELAMMMARLYTGSLEMISLRNA 189
Query: 363 YHGMSIGTMGTCGQHTWKQPMPQGFGYHHALNPDPYRGPYGDDGARYAADMADLISGG 536
YHG S T+G +TWK P+PQG HH +NPDPYRG +G DG+ YA D+ D I G
Sbjct: 190 YHGGSSNTIGLTALNTWKYPLPQG-EIHHVVNPDPYRGVFGSDGSLYAKDVHDHIEYG 246
>gb|AAK76615.1| putative beta-alanine-pyruvate aminotransferase [Arabidopsis
thaliana]
Length = 477
Score = 214 bits (544), Expect = 1e-54
Identities = 100/178 (56%), Positives = 131/178 (73%)
Frame = +3
Query: 3 SLFWHFKKPVMIVEGKMQYLFDEKGRRYLDAFAGIVTVSVGHCHPAVNEAINKQNALLQH 182
S+F ++KP+ IV+GKMQYLFDE GRRYLDAFAGI V+ GHCHP V E + Q LQH
Sbjct: 72 SMFCLYRKPLNIVDGKMQYLFDESGRRYLDAFAGIAVVNCGHCHPDVVEPVINQIKRLQH 131
Query: 183 TTTIYLNNQIAEYAKELTDRMPGNLKVVYFVNSGSEANDMAIMLARLYTGNWDMLCLRNA 362
T +YLN+ IA++++ L ++PG+LKVV+F NSG+EAN++A+M+A+LYTG D++ +RN
Sbjct: 132 PTVLYLNHAIADFSEALASKLPGDLKVVFFTNSGTEANELALMMAKLYTGCQDIVAVRNG 191
Query: 363 YHGMSIGTMGTCGQHTWKQPMPQGFGYHHALNPDPYRGPYGDDGARYAADMADLISGG 536
YHG + TMG GQ WK + Q HHALNPDPYRG +G DG +YA D+ DLI G
Sbjct: 192 YHGNAAATMGATGQSMWKFNVVQN-SVHHALNPDPYRGVFGSDGEKYAKDLQDLIQYG 248
>ref|NP_181374.1| alanine--glyoxylate aminotransferase (beta-alanine-pyruvate
aminotransferase/AGT), putative [Arabidopsis thaliana]
gi|7434183|pir||T02505 probable beta-alanine-pyruvate
aminotransferase At2g38400 [imported] - Arabidopsis
thaliana gi|3395432|gb|AAC28764.1| putative
beta-alanine-pyruvate aminotransferase [Arabidopsis
thaliana] gi|5731261|gb|AAD48838.1|AF166352_1
alanine:glyoxylate aminotransferase 2 homolog
[Arabidopsis thaliana] gi|21553486|gb|AAM62579.1|
putative beta-alanine-pyruvate aminotransferase
[Arabidopsis thaliana] gi|25054854|gb|AAN71917.1|
putative beta-alanine-pyruvate aminotransferase
[Arabidopsis thaliana]
Length = 477
Score = 214 bits (544), Expect = 1e-54
Identities = 100/178 (56%), Positives = 131/178 (73%)
Frame = +3
Query: 3 SLFWHFKKPVMIVEGKMQYLFDEKGRRYLDAFAGIVTVSVGHCHPAVNEAINKQNALLQH 182
S+F ++KP+ IV+GKMQYLFDE GRRYLDAFAGI V+ GHCHP V E + Q LQH
Sbjct: 72 SMFCLYRKPLNIVDGKMQYLFDESGRRYLDAFAGIAVVNCGHCHPDVVEPVINQIKRLQH 131
Query: 183 TTTIYLNNQIAEYAKELTDRMPGNLKVVYFVNSGSEANDMAIMLARLYTGNWDMLCLRNA 362
T +YLN+ IA++++ L ++PG+LKVV+F NSG+EAN++A+M+A+LYTG D++ +RN
Sbjct: 132 PTVLYLNHAIADFSEALASKLPGDLKVVFFTNSGTEANELALMMAKLYTGCQDIVAVRNG 191
Query: 363 YHGMSIGTMGTCGQHTWKQPMPQGFGYHHALNPDPYRGPYGDDGARYAADMADLISGG 536
YHG + TMG GQ WK + Q HHALNPDPYRG +G DG +YA D+ DLI G
Sbjct: 192 YHGNAAATMGATGQSMWKFNVVQN-SVHHALNPDPYRGVFGSDGEKYAKDLQDLIQYG 248
>ref|NP_187498.1| alanine--glyoxylate aminotransferase (beta-alanine-pyruvate
aminotransferase/AGT), putative [Arabidopsis thaliana]
gi|6403506|gb|AAF07846.1|AC010871_22 putative
aminotransferase [Arabidopsis thaliana]
gi|20466700|gb|AAM20667.1| putative aminotransferase
[Arabidopsis thaliana]
Length = 481
Score = 211 bits (536), Expect = 9e-54
Identities = 99/178 (55%), Positives = 131/178 (72%)
Frame = +3
Query: 3 SLFWHFKKPVMIVEGKMQYLFDEKGRRYLDAFAGIVTVSVGHCHPAVNEAINKQNALLQH 182
+LF + P+ IVE KMQY+FDE GRRYLDAF GI TVS GHCHP V ++ KQ L+ H
Sbjct: 75 ALFHFYNTPLNIVEAKMQYVFDENGRRYLDAFGGIATVSCGHCHPEVVNSVVKQLKLINH 134
Query: 183 TTTIYLNNQIAEYAKELTDRMPGNLKVVYFVNSGSEANDMAIMLARLYTGNWDMLCLRNA 362
+T +YLN+ I+++A+ L +PG+LKVV+F NSG+EAN++A+M+ARLYTG D++ LRN+
Sbjct: 135 STILYLNHTISDFAEALVSTLPGDLKVVFFTNSGTEANELAMMMARLYTGCNDIVSLRNS 194
Query: 363 YHGMSIGTMGTCGQHTWKQPMPQGFGYHHALNPDPYRGPYGDDGARYAADMADLISGG 536
YHG + TMG Q WK + Q G HHA+NPDPYRG +G DG +YA+D+ DLI G
Sbjct: 195 YHGNAAATMGATAQSNWKFNVVQS-GVHHAINPDPYRGIFGSDGEKYASDVHDLIQFG 251
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
HCL098b10_r |
AV645098 |
1 |
455 |
2 |
MX220e10_r |
BP090214 |
236 |
637 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute