Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002717A_C01 KCC002717A_c01
(425 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK81683.1| unknown [Burkholderia cepacia] 39 0.017
gb|AAO50330.1| Purkinje cell espin isoform 1 [Rattus norvegicus] 39 0.022
gb|AAO50331.1| Purkinje cell espin isoform 1+ [Rattus norvegicus] 39 0.022
ref|NP_062568.1| espin; Jerker, deafness locus [Rattus norvegicu... 39 0.022
ref|NP_066916.1| ICP4 protein [Gallid herpesvirus 3] gi|10800049... 38 0.037
>gb|AAK81683.1| unknown [Burkholderia cepacia]
Length = 176
Score = 38.9 bits (89), Expect = 0.017
Identities = 29/88 (32%), Positives = 37/88 (41%), Gaps = 7/88 (7%)
Frame = +2
Query: 143 EGGIKQMLLQRLGGSEALPRRVADRCCWAGSLTQWPMTVSWSRCRQMMCCSWSTSTP--- 313
+GG+ + L L + ALP R A R +G WP+ CR+ C WST P
Sbjct: 6 KGGLAALSLAALQ-TLALPPRAAARPTRSGWRASWPVP-----CRRRACMCWSTPRPIRA 59
Query: 314 ----PLLRPGCRCTAHPMTHCACLPRLR 385
GCRC + C C PR R
Sbjct: 60 IVCATTRARGCRCRP---SACTCAPRQR 84
>gb|AAO50330.1| Purkinje cell espin isoform 1 [Rattus norvegicus]
Length = 511
Score = 38.5 bits (88), Expect = 0.022
Identities = 31/116 (26%), Positives = 54/116 (45%), Gaps = 3/116 (2%)
Frame = -3
Query: 345 AVQRQPGLSSGGVDVLQEQHIICLQRDHETVIGHCVKLPAQQQRSATRRGSASLPPSR-- 172
+++++P S G L+ Q L++D E ++ H L ++Q S ++ S S PS
Sbjct: 152 SLKKEPS-SGDGYSGLRRQDSGLLRQDSELLLRHNTGL--RRQDSDRKQRSFSKQPSTGD 208
Query: 171 -WSSICLMPPSPASAHPGTSHAESMSTIAQDGEQHSQCLGWGRARYMLPRNAPPAP 7
+ + P P +A PG +H+E + + H+ C +A LP PP P
Sbjct: 209 YYRQLGRSPGEPLAARPGMAHSEE-AALLPGNHVHNGCSADSKASRELPPPPPPPP 263
>gb|AAO50331.1| Purkinje cell espin isoform 1+ [Rattus norvegicus]
Length = 520
Score = 38.5 bits (88), Expect = 0.022
Identities = 31/116 (26%), Positives = 54/116 (45%), Gaps = 3/116 (2%)
Frame = -3
Query: 345 AVQRQPGLSSGGVDVLQEQHIICLQRDHETVIGHCVKLPAQQQRSATRRGSASLPPSR-- 172
+++++P S G L+ Q L++D E ++ H L ++Q S ++ S S PS
Sbjct: 152 SLKKEPS-SGDGYSGLRRQDSGLLRQDSELLLRHNTGL--RRQDSDRKQRSFSKQPSTGD 208
Query: 171 -WSSICLMPPSPASAHPGTSHAESMSTIAQDGEQHSQCLGWGRARYMLPRNAPPAP 7
+ + P P +A PG +H+E + + H+ C +A LP PP P
Sbjct: 209 YYRQLGRSPGEPLAARPGMAHSEE-AALLPGNHVHNGCSADSKASRELPPPPPPPP 263
>ref|NP_062568.1| espin; Jerker, deafness locus [Rattus norvegicus]
gi|3320122|gb|AAC53594.1| espin [Rattus norvegicus]
Length = 837
Score = 38.5 bits (88), Expect = 0.022
Identities = 31/116 (26%), Positives = 54/116 (45%), Gaps = 3/116 (2%)
Frame = -3
Query: 345 AVQRQPGLSSGGVDVLQEQHIICLQRDHETVIGHCVKLPAQQQRSATRRGSASLPPSR-- 172
+++++P S G L+ Q L++D E ++ H L ++Q S ++ S S PS
Sbjct: 478 SLKKEPS-SGDGYSGLRRQDSGLLRQDSELLLRHNTGL--RRQDSDRKQRSFSKQPSTGD 534
Query: 171 -WSSICLMPPSPASAHPGTSHAESMSTIAQDGEQHSQCLGWGRARYMLPRNAPPAP 7
+ + P P +A PG +H+E + + H+ C +A LP PP P
Sbjct: 535 YYRQLGRSPGEPLAARPGMAHSEE-AALLPGNHVHNGCSADSKASRELPPPPPPPP 589
>ref|NP_066916.1| ICP4 protein [Gallid herpesvirus 3] gi|10800049|dbj|BAB16594.1| ICP4
protein [Gallid herpesvirus 3]
Length = 2033
Score = 37.7 bits (86), Expect = 0.037
Identities = 30/106 (28%), Positives = 40/106 (37%)
Frame = -1
Query: 410 RPAPAAPPSGGGGGRHSGSLGVQCSGSQV*AAEV*MYSRNNTSSACSVTTRPSSATVSSS 231
RP PA+ PS G R S S S S SS+ + ++ S+ SS
Sbjct: 935 RPPPASYPSLGCRSRSSSSSSASSSSS---------------SSSSAPSSSEQSSAAPSS 979
Query: 230 RPSSSGQPRDVAAPRCHRVAGAASA*CRLHRPLHTPAPRMPSRCPP 93
R SS R+ AP+C R R P+P + PP
Sbjct: 980 RTSSRSPTREAGAPQCAARGRGRGRGGRRGRGRRAPSPSSETAAPP 1025
