KCC002715A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002715A_C01 KCC002715A_c01
ctgagatattgTTACGTTATTGTAGTCCTTCCAACGTAAACAATATGATGGTTGCCTAGA
GCACTTCACACGGCTTAGTGTCCCACTTACTCGCGACATTCACAGGATGGGGAACTCAAA
GAGCAAGGAACCGGCCTTTGACCCCAATGCGCAGAGCCCCTACAACGTTGGGTTTCAGGA
GCTGACGGACGCAAATGAGAACAAGGATATGGAGTTCTTCGCGCGCGTGGGGAAGGCGGA
GGGCCTCTCCAAACTCTTGTCAAGCTCCGTCGAGTCAGGGTTGAACGCTGACCCCCAAGC
AGCAGGAGACGACAGCGTTCTGGAGCACCGTCGTGTCTTCGGCGAGAATAAGCATGCCGA
GACGCCGCCCAAGAATTTTTTCTTCCTGGTATGGGAGGTGGTGCAAGATCCTATCCTTAT
CCTGCTGATTGCGGCGGCCACGGTTTCCACCGTCCTTGGAGCTGCCATTCCGGAGGAGCG
CGCAAAGAGCGCCTGGGTTGAGGGAGTGGCCATTTGGGTGGCTGTCATCGTCGTCACGCT
CGTGGGTGCGGGTAACGACTACTCCAAGGACCTGCAGTTCCGGAAACTGAACGCGCAGAA
GGACCGCATCGAGATCAAGGTGGTGCGCGGTGGGCAGCAGATCCTGGTGCCCAACACGGA
CCTGGTGGTGGGCGACGTCATGCTGCTGGACACTGGAGACAAGGTGGTTGCTGACGCCAT
CGTGATTGACAGCCAGGGGCTCACAATGGACGAGGCGTCGCTGACGGGCGAGTCGGACCC
CATGAAGAAGAACACCACAGCGGACCCCTGGGTCATGTCGGGAACACAGGTGACGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002715A_C01 KCC002715A_c01
         (836 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_194719.1| potential calcium-transporting ATPase 10, plasm...   158  9e-38
ref|NP_188755.2| potential calcium-transporting ATPase 9, plasma...   153  4e-36
sp|Q9LU41|ACA9_ARATH Potential calcium-transporting ATPase 9, pl...   153  4e-36
ref|XP_311357.1| ENSANGP00000016693 [Anopheles gambiae] gi|30177...   149  7e-35
ref|NP_851200.1| calcium-transporting ATPase [Arabidopsis thalia...   147  3e-34

>ref|NP_194719.1| potential calcium-transporting ATPase 10, plasma membrane-type
           (Ca2+-ATPase, isoform 10) [Arabidopsis thaliana]
           gi|12643856|sp|Q9SZR1|ACAA_ARATH Potential
           calcium-transporting ATPase 10, plasma membrane-type
           (Ca(2+)-ATPase isoform 10) gi|25290667|pir||C85349
           Ca2+-transporting ATPase-like protein [imported] -
           Arabidopsis thaliana gi|7269889|emb|CAB79748.1|
           Ca2+-transporting ATPase-like protein [Arabidopsis
           thaliana]
          Length = 1069

 Score =  158 bits (400), Expect = 9e-38
 Identities = 81/224 (36%), Positives = 139/224 (61%)
 Frame = +2

Query: 161 YNVGFQELTDANENKDMEFFARVGKAEGLSKLLSSSVESGLNADPQAAGDDSVLEHRRVF 340
           + +G +++   + ++++     +G   GLS LL +++E G++ D     DD +L+ +  F
Sbjct: 114 FGIGQEQIVSISRDQNIGALQELGGVRGLSDLLKTNLEKGIHGD-----DDDILKRKSAF 168

Query: 341 GENKHAETPPKNFFFLVWEVVQDPILILLIAAATVSTVLGAAIPEERAKSAWVEGVAIWV 520
           G N + +   ++F+  VWE  QD  LI+LI AA  S  LG  I  E  +  W +G++I  
Sbjct: 169 GSNTYPQKKGRSFWRFVWEASQDLTLIILIVAAVASLALG--IKTEGIEKGWYDGISIAF 226

Query: 521 AVIVVTLVGAGNDYSKDLQFRKLNAQKDRIEIKVVRGGQQILVPNTDLVVGDVMLLDTGD 700
           AV++V +V A +DY + LQF+ LN +K  I ++V R G+++ +   D+VVGDV+ L+ GD
Sbjct: 227 AVLLVIVVTATSDYRQSLQFQNLNEEKRNIRLEVTRDGRRVEISIYDIVVGDVIPLNIGD 286

Query: 701 KVVADAIVIDSQGLTMDEASLTGESDPMKKNTTADPWVMSGTQV 832
           +V AD +++    L +DE+S+TGES  ++KN+T  P++MSG +V
Sbjct: 287 QVPADGVLVAGHSLAVDESSMTGESKIVQKNSTKHPFLMSGCKV 330

>ref|NP_188755.2| potential calcium-transporting ATPase 9, plasma membrane-type
           (Ca2+-ATPase, isoform 9) [Arabidopsis thaliana]
          Length = 1086

 Score =  153 bits (386), Expect = 4e-36
 Identities = 83/224 (37%), Positives = 137/224 (61%)
 Frame = +2

Query: 161 YNVGFQELTDANENKDMEFFARVGKAEGLSKLLSSSVESGLNADPQAAGDDSVLEHRRVF 340
           +++  ++L     N++M    + G  +G+++ L S++E G+N D     +  V++ +  F
Sbjct: 128 FDIDLEKLVSMTRNQNMSNLQQYGGVKGVAEKLKSNMEQGINED-----EKEVIDRKNAF 182

Query: 341 GENKHAETPPKNFFFLVWEVVQDPILILLIAAATVSTVLGAAIPEERAKSAWVEGVAIWV 520
           G N + +   KNFF  +WE  QD  LI+LI AA  S  LG  I  E  K  W++G +I  
Sbjct: 183 GSNTYPKKKGKNFFMFLWEAWQDLTLIILIIAAVTSLALG--IKTEGLKEGWLDGGSIAF 240

Query: 521 AVIVVTLVGAGNDYSKDLQFRKLNAQKDRIEIKVVRGGQQILVPNTDLVVGDVMLLDTGD 700
           AV++V +V A +DY + LQF+ LN +K  I+++V+RGG+ + +   D+VVGDV+ L  GD
Sbjct: 241 AVLLVIVVTAVSDYRQSLQFQNLNDEKRNIQLEVMRGGRTVKISIYDVVVGDVIPLRIGD 300

Query: 701 KVVADAIVIDSQGLTMDEASLTGESDPMKKNTTADPWVMSGTQV 832
           +V AD ++I    L +DE+S+TGES  + K+  + P++MSG +V
Sbjct: 301 QVPADGVLISGHSLAIDESSMTGESKIVHKDQKS-PFLMSGCKV 343

>sp|Q9LU41|ACA9_ARATH Potential calcium-transporting ATPase 9, plasma membrane-type
           (Ca(2+)-ATPase isoform 9) gi|9280219|dbj|BAB01709.1|
           Ca2+-transporting ATPase [Arabidopsis thaliana]
          Length = 1073

 Score =  153 bits (386), Expect = 4e-36
 Identities = 83/224 (37%), Positives = 137/224 (61%)
 Frame = +2

Query: 161 YNVGFQELTDANENKDMEFFARVGKAEGLSKLLSSSVESGLNADPQAAGDDSVLEHRRVF 340
           +++  ++L     N++M    + G  +G+++ L S++E G+N D     +  V++ +  F
Sbjct: 115 FDIDLEKLVSMTRNQNMSNLQQYGGVKGVAEKLKSNMEQGINED-----EKEVIDRKNAF 169

Query: 341 GENKHAETPPKNFFFLVWEVVQDPILILLIAAATVSTVLGAAIPEERAKSAWVEGVAIWV 520
           G N + +   KNFF  +WE  QD  LI+LI AA  S  LG  I  E  K  W++G +I  
Sbjct: 170 GSNTYPKKKGKNFFMFLWEAWQDLTLIILIIAAVTSLALG--IKTEGLKEGWLDGGSIAF 227

Query: 521 AVIVVTLVGAGNDYSKDLQFRKLNAQKDRIEIKVVRGGQQILVPNTDLVVGDVMLLDTGD 700
           AV++V +V A +DY + LQF+ LN +K  I+++V+RGG+ + +   D+VVGDV+ L  GD
Sbjct: 228 AVLLVIVVTAVSDYRQSLQFQNLNDEKRNIQLEVMRGGRTVKISIYDVVVGDVIPLRIGD 287

Query: 701 KVVADAIVIDSQGLTMDEASLTGESDPMKKNTTADPWVMSGTQV 832
           +V AD ++I    L +DE+S+TGES  + K+  + P++MSG +V
Sbjct: 288 QVPADGVLISGHSLAIDESSMTGESKIVHKDQKS-PFLMSGCKV 330

>ref|XP_311357.1| ENSANGP00000016693 [Anopheles gambiae] gi|30177718|gb|EAA07065.2|
           ENSANGP00000016693 [Anopheles gambiae str. PEST]
          Length = 1025

 Score =  149 bits (375), Expect = 7e-35
 Identities = 93/238 (39%), Positives = 136/238 (57%), Gaps = 14/238 (5%)
 Frame = +2

Query: 161 YNVGFQELTDANENKDMEFFARVGKAEGLSKL---LSSSVESGLNADPQAAGDDSVLEHR 331
           Y +  + L +  E++  E  A+V +  G+  +   L +S   GL+      G  + ++HR
Sbjct: 11  YQITQKNLREIMEHRGREAVAKVNEYGGVGDICRKLYTSPNEGLS------GSTADIDHR 64

Query: 332 R-VFGENKHAETPPKNFFFLVWEVVQDPILILLIAAATVSTVLG---------AAIPEER 481
           R  FG N     PPK+F  LVWE +QD  LI+L  AA +S +L            + +E 
Sbjct: 65  RETFGSNVIPPKPPKSFLTLVWEALQDVTLIILEIAAIISLLLSFYQPADDDEPVVQDEE 124

Query: 482 AKSAWVEGVAIWVAVIVVTLVGAGNDYSKDLQFRKLNAQ-KDRIEIKVVRGGQQILVPNT 658
              +W+EG+AI V+V VV +V A NDYSK+ QFR L ++ +   +  V+RGG  + V   
Sbjct: 125 EHYSWIEGLAILVSVFVVVVVTAFNDYSKEKQFRGLQSRIEGEHKFSVIRGGDAVQVNIG 184

Query: 659 DLVVGDVMLLDTGDKVVADAIVIDSQGLTMDEASLTGESDPMKKNTTADPWVMSGTQV 832
           D+VVGD+  +  GD + AD I+I S  L +DE+SLTGESD +KKN + DP V+SGT V
Sbjct: 185 DIVVGDICQIKYGDLLPADGILIQSNDLKVDESSLTGESDHVKKNESTDPIVLSGTHV 242

>ref|NP_851200.1| calcium-transporting ATPase [Arabidopsis thaliana]
           gi|30696827|ref|NP_200521.3| calcium-transporting ATPase
           [Arabidopsis thaliana] gi|12643246|sp|Q9LF79|ACA8_ARATH
           Calcium-transporting ATPase 8, plasma membrane-type
           (Ca(2+)-ATPase isoform 8) gi|25290678|pir||T52654
           Ca2+-transporting ATPase (EC 3.6.3.8) aca8, plasma
           membrane [validated] - Arabidopsis thaliana
           gi|8919831|emb|CAB96189.1| plasma membrane Ca2+-ATPase
           [Arabidopsis thaliana] gi|17978917|gb|AAL47426.1|
           AT5g57110/MUL3_5 [Arabidopsis thaliana]
          Length = 1074

 Score =  147 bits (370), Expect = 3e-34
 Identities = 82/243 (33%), Positives = 138/243 (56%), Gaps = 1/243 (0%)
 Frame = +2

Query: 107 MGNSKSKEPAFDPNAQS-PYNVGFQELTDANENKDMEFFARVGKAEGLSKLLSSSVESGL 283
           MG     E    P   +  + +  ++L   +++ +     + G  +GL+ LL ++ E G+
Sbjct: 95  MGRESGVEKTTGPATPAGDFGITPEQLVIMSKDHNSGALEQYGGTQGLANLLKTNPEKGI 154

Query: 284 NADPQAAGDDSVLEHRRVFGENKHAETPPKNFFFLVWEVVQDPILILLIAAATVSTVLGA 463
           + D     DD +L+ + ++G N +     K F   +W+   D  LI+L+ AA  S  LG 
Sbjct: 155 SGD-----DDDLLKRKTIYGSNTYPRKKGKGFLRFLWDACHDLTLIILMVAAVASLALG- 208

Query: 464 AIPEERAKSAWVEGVAIWVAVIVVTLVGAGNDYSKDLQFRKLNAQKDRIEIKVVRGGQQI 643
            I  E  K  W +G +I  AVI+V +V A +DY + LQF+ LN +K  I ++V+RGG+++
Sbjct: 209 -IKTEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFQNLNDEKRNIHLEVLRGGRRV 267

Query: 644 LVPNTDLVVGDVMLLDTGDKVVADAIVIDSQGLTMDEASLTGESDPMKKNTTADPWVMSG 823
            +   D+VVGDV+ L+ G++V AD ++I    L +DE+S+TGES  + K+   DP++MSG
Sbjct: 268 EISIYDIVVGDVIPLNIGNQVPADGVLISGHSLALDESSMTGESKIVNKDANKDPFLMSG 327

Query: 824 TQV 832
            +V
Sbjct: 328 CKV 330



EST assemble image


clone accession position
1 MXL011c04_r BP093635 1 453
2 MXL073c10_r BP097302 12 367
3 HCL096h06_r AV645006 39 245
4 MXL011h04_r BP093673 71 484
5 MXL042e03_r BP095477 326 777
6 MXL049d11_r BP095923 357 836




Chlamydomonas reinhardtii
Kazusa DNA Research Institute