Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002705A_C01 KCC002705A_c01
(505 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00091914.1| COG3408: Glycogen debranching enzyme [Azotoba... 47 2e-04
ref|NP_519312.1| PROBABLE DNA POLYMERASE III (SUBUNITS TAU AND G... 46 3e-04
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 42 0.001
gb|AAD17484.2| dihydrolipoamide acetyltransferase [Streptomyces ... 44 0.001
ref|XP_290770.2| KIAA1447 protein [Homo sapiens] 44 0.001
>ref|ZP_00091914.1| COG3408: Glycogen debranching enzyme [Azotobacter vinelandii]
Length = 503
Score = 46.6 bits (109), Expect = 2e-04
Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 15/100 (15%)
Frame = +3
Query: 234 ARSVVAMESGWRRRLSRWWAACPAARAPPAWSPRARPTAAPS*PAPSPSTPPCRPL---- 401
+R GW R W + P R P P A P +P A +PS+PPCRP
Sbjct: 39 SRRRACSRDGWTSRGPTWRCSPPTCRPVPIPMP-AFP-GSPRLSAATPSSPPCRPCGSTP 96
Query: 402 ------WTRWPLLRPASPPRLWTAARA-----CGPGATSA 488
W WP +RPA P T +RA C G +A
Sbjct: 97 AWRRACWPSWPAIRPARPRPSATPSRARSCTRCAKGEMAA 136
>ref|NP_519312.1| PROBABLE DNA POLYMERASE III (SUBUNITS TAU AND GAMMA) PROTEIN
[Ralstonia solanacearum] gi|17428205|emb|CAD14893.1|
PROBABLE DNA POLYMERASE III (SUBUNITS TAU AND GAMMA)
PROTEIN [Ralstonia solanacearum]
Length = 728
Score = 45.8 bits (107), Expect = 3e-04
Identities = 41/127 (32%), Positives = 54/127 (42%), Gaps = 24/127 (18%)
Frame = +3
Query: 183 ARASSSKCSPPRPRGPAARSVVAMESGWRRRLSRWWAACPAARAPPAWSPRARPTAA--P 356
A A+ + S P R PA ++ A R +R AA PA+ P +P ARP AA
Sbjct: 440 APATPAPASAPARRSPALEALAAARQASSRG-ARGGAAAPASAPAPVPAPAARPAAAGPR 498
Query: 357 S*PAPSPSTPPCR---------------PLWTRWP-LLRPASPPRL------WTAARACG 470
S PA +P++PP R P W P SP ++ W AA
Sbjct: 499 SNPAAAPASPPVRREPAAASAPADDFAPPPWEEMPDEFASPSPDQIDAAFAGWEAASTTR 558
Query: 471 PGATSAA 491
PGA +AA
Sbjct: 559 PGAQAAA 565
Score = 31.6 bits (70), Expect = 5.8
Identities = 34/113 (30%), Positives = 45/113 (39%), Gaps = 13/113 (11%)
Frame = +3
Query: 192 SSSKCSPPRPRGPAARSVVAMESGWRRRLSRWWAACPAARAPPAW-------SPRAR--- 341
S PP G A ++ G R + AA P A+A PA +PRA
Sbjct: 368 SGGDAPPPSGSGKRAVPSAGVQGGSSRPVVAAAAAGPVAQAVPAVRAERVVDAPRATYQA 427
Query: 342 --PTAAPS*PAPSPSTP-PCRPLWTRWPLLRPASPPRLWTAARACGPGATSAA 491
P AA AP+P+TP P R P L + R ++ A G A A+
Sbjct: 428 DPPAAAAPAAAPAPATPAPASAPARRSPALEALAAARQASSRGARGGAAAPAS 480
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 42.0 bits (97), Expect(2) = 0.001
Identities = 37/104 (35%), Positives = 42/104 (39%), Gaps = 11/104 (10%)
Frame = +3
Query: 210 PPRPRGPAARSVVAMESG-----------WRRRLSRWWAACPAARAPPAWSPRARPTAAP 356
PP P GPAAR A + R S AA PA PA + PTA P
Sbjct: 179 PPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPTPTPAPTATPAPTATP 238
Query: 357 S*PAPSPSTPPCRPLWTRWPLLRPASPPRLWTAARACGPGATSA 488
+ P +P PP P +RP SPP A PGAT A
Sbjct: 239 A-PGSTPGAPPAGRPGAPPPGVRPGSPP---AAGSPPAPGATPA 278
Score = 38.1 bits (87), Expect = 0.062
Identities = 33/107 (30%), Positives = 41/107 (37%), Gaps = 5/107 (4%)
Frame = +3
Query: 189 ASSSKCSPPRPRGPAARSVVAMESGWRRRLSRWWAACPAARAPPAWSPRARPTAAPS*PA 368
A++ + +PP P PAAR P A PA P PTA P+ A
Sbjct: 156 AAAPQHAPPPPPPPAARPTPTPP--------------PPPPAGPAARPTPAPTATPTPVA 201
Query: 369 PSPSTPPCRPLWTRWPLLRPASPPRLWTAARAC-----GPGATSAAP 494
P P+ P RP + P PA P A PG+T AP
Sbjct: 202 PPPAAPTARP-GSPAPAATPAPTPTPAPTATPAPTATPAPGSTPGAP 247
Score = 35.0 bits (79), Expect = 0.53
Identities = 30/84 (35%), Positives = 32/84 (37%)
Frame = +3
Query: 210 PPRPRGPAARSVVAMESGWRRRLSRWWAACPAARAPPAWSPRARPTAAPS*PAPSPSTPP 389
PP P PAA S + A P APPA P P A P AP + PP
Sbjct: 109 PPPPPPPAAPK---QPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPPP 165
Query: 390 CRPLWTRWPLLRPASPPRLWTAAR 461
P R P P PP AAR
Sbjct: 166 PPPPAAR-PTPTPPPPPPAGPAAR 188
Score = 34.7 bits (78), Expect = 0.69
Identities = 22/50 (44%), Positives = 22/50 (44%)
Frame = +3
Query: 291 AACPAARAPPAWSPRARPTAAPS*PAPSPSTPPCRPLWTRWPLLRPASPP 440
AA P A APP P AAP PA P PP P RPA PP
Sbjct: 68 AAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPPP-------PAARPAPPP 110
Score = 32.7 bits (73), Expect = 2.6
Identities = 34/102 (33%), Positives = 39/102 (37%), Gaps = 7/102 (6%)
Frame = +3
Query: 210 PPRPRGPAARSVVAMESGWRRRLSRWWAACPAARAPPAWSPRARPTAAPS*PAPSPSTPP 389
PP P P S + + + A PAAR PA +P A P AA AP P PP
Sbjct: 112 PPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAAR--PAPTPPAPPPAAAPQHAPPPPPPP 169
Query: 390 -CRPLWT------RWPLLRPASPPRLWTAARACGPGATSAAP 494
RP T P RP P A P A +A P
Sbjct: 170 AARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARP 211
Score = 32.7 bits (73), Expect = 2.6
Identities = 27/67 (40%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +3
Query: 300 PAARAPPAWSPRARPTAAPS*PAPSPSTP--PCRPLWTRWPLLRPASPPRLWTAARACGP 473
PAA PP P ARP AP P P P+ P P P P PP AAR P
Sbjct: 92 PAAPPPPPPPPAARP--APPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAAR---P 146
Query: 474 GATSAAP 494
T AP
Sbjct: 147 APTPPAP 153
Score = 32.0 bits (71), Expect = 4.5
Identities = 22/47 (46%), Positives = 24/47 (50%)
Frame = +3
Query: 300 PAARAPPAWSPRARPTAAPS*PAPSPSTPPCRPLWTRWPLLRPASPP 440
P APPA ARP A P PA +P PP P P RPA+PP
Sbjct: 55 PPGAAPPA--APARPAAPP--PAAAPPHPPAAPPPAAAP-PRPAAPP 96
Score = 31.6 bits (70), Expect = 5.8
Identities = 21/64 (32%), Positives = 26/64 (39%), Gaps = 1/64 (1%)
Frame = +3
Query: 309 RAPPAWSPRARPTAAPS*PA-PSPSTPPCRPLWTRWPLLRPASPPRLWTAARACGPGATS 485
+ PP P A P AAP+ PA P P+ P P PA+PP R P
Sbjct: 49 KQPPKGPPGAAPPAAPARPAAPPPAAAPPHP---------PAAPPPAAAPPRPAAPPPPP 99
Query: 486 AAPS 497
P+
Sbjct: 100 PPPA 103
Score = 21.2 bits (43), Expect(2) = 0.001
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 11 AAIAQQHQTQVLTPCQRALLPILAPRELSFCAKPRQLPP 127
AA QQH P A P P A P+ PP
Sbjct: 126 AAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPP 164
>gb|AAD17484.2| dihydrolipoamide acetyltransferase [Streptomyces seoulensis]
Length = 612
Score = 43.9 bits (102), Expect = 0.001
Identities = 34/107 (31%), Positives = 44/107 (40%)
Frame = +3
Query: 183 ARASSSKCSPPRPRGPAARSVVAMESGWRRRLSRWWAACPAARAPPAWSPRARPTAAPS* 362
A ++ +P P+ PAA + A A PA AP A +P+A APS
Sbjct: 210 AAGAAPAAAPEAPKAPAAEAPAAPAP-----------AAPAPAAPAAPAPQAPAPQAPSA 258
Query: 363 PAPSPSTPPCRPLWTRWPLLRPASPPRLWTAARACGPGATSAAPSCT 503
PAP T P P PA+P A A P A +AP+ T
Sbjct: 259 PAPQQQTAPA-------PDPAPAAPAPAPAPAPAQAPAAAPSAPTAT 298
>ref|XP_290770.2| KIAA1447 protein [Homo sapiens]
Length = 174
Score = 43.5 bits (101), Expect = 0.001
Identities = 38/123 (30%), Positives = 49/123 (38%), Gaps = 23/123 (18%)
Frame = +3
Query: 201 KCSPPRPRGPA---ARSVVAMESGWRRRLSRWW-AACPAARAPPA---WSPRARPTAAPS 359
+C+ R R + + S R R R W ACP A +P P ARP P
Sbjct: 25 RCASTRARQSSRCPTTATATAPSRTRTRTGRGWRPACPPASSPACPCPLPPLARPPPPPQ 84
Query: 360 *PAPSPST--------PPCRPLWTRWPLLRPASP---PRLWTAARACGPGATS-----AA 491
P P P++ P + TR RPASP P W + R C P A + +A
Sbjct: 85 APCPPPASAPPTTRTRPTAQTTRTRLCCCRPASPTPCPPSWPSPRPCAPRAAALTRMPSA 144
Query: 492 PSC 500
SC
Sbjct: 145 ASC 147
Score = 36.2 bits (82), Expect = 0.24
Identities = 33/90 (36%), Positives = 38/90 (41%), Gaps = 2/90 (2%)
Frame = -3
Query: 494 WCRTCRTGSTGPCCGPQPWR--TCRPQQRPPGPERATWRG*RRWGRSRWGCRWPRPRRPR 321
W RT R G P C P WR + R +Q P AT R R+R G W RP P
Sbjct: 7 WARTRRGGHPSPRC-PWGWRCASTRARQSSRCPTTATATAPSRT-RTRTGRGW-RPACPP 63
Query: 320 RGSPSGRARGPPSA*PAAPS*LHCNHAASS 231
SP+ PP A P P C AS+
Sbjct: 64 ASSPACPCPLPPLARPPPPPQAPCPPPASA 93
