Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002702A_C01 KCC002702A_c01
(483 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD40904.1| OSJNBa0036B21.22 [Oryza sativa (japonica cultiva... 39 0.025
ref|NP_629987.1| hypothetical protein SC2E9.06 [Streptomyces coe... 39 0.032
pir||S58380 probable RNA-directed DNA polymerase (EC 2.7.7.49) -... 38 0.055
gb|AAF07180.1|AF192769_1 serum opacity factor precursor [Strepto... 38 0.055
gb|AAG39439.1|AF296187_1 Sof precursor [Streptococcus pyogenes] 38 0.055
>emb|CAD40904.1| OSJNBa0036B21.22 [Oryza sativa (japonica cultivar-group)]
Length = 260
Score = 39.3 bits (90), Expect = 0.025
Identities = 39/123 (31%), Positives = 58/123 (46%), Gaps = 3/123 (2%)
Frame = +1
Query: 121 KAQTRVQAALRYRKPTLKL-SQ*SRAPKPPARRQPVVLATPVPRRTHRCPLLAARHAHPL 297
+A + AA R+PT +L + R+P+PPA R+P + AT ++ C R A
Sbjct: 65 RADAALCAASAARRPTGQLLAAGLRSPRPPASRRPPLAATAGATPSYLCSHPRRRRAVFR 124
Query: 298 AQPKPRLSCTRSLSCVPHRVPLRR--DLLPTRWC*AMAPMSQTRRKKATSSRHISSTSRT 471
+P+P+ + R L V PLRR LP R S + + +T H +TS T
Sbjct: 125 PRPRPQPAGAR-LGTVVLTPPLRRLHRTLPNRK--LTRTPSAHKAQHSTRRHHSQTTSPT 181
Query: 472 PQR 480
QR
Sbjct: 182 TQR 184
>ref|NP_629987.1| hypothetical protein SC2E9.06 [Streptomyces coelicolor A3(2)]
gi|7479438|pir||T34817 hypothetical protein SC2E9.06
SC2E9.06 - Streptomyces coelicolor
gi|2815351|emb|CAA16474.1| hypothetical protein SC2E9.06
[Streptomyces coelicolor A3(2)]
Length = 317
Score = 38.9 bits (89), Expect = 0.032
Identities = 33/101 (32%), Positives = 43/101 (41%), Gaps = 7/101 (6%)
Frame = +3
Query: 183 VVKGAKTTRTTTAGGVGHAGAASNAPVPPPRREARASARSAKAPLKLHKVVEL-----CA 347
V AK T T AG GAA+ PVPP A+ + A ++L + EL
Sbjct: 128 VAGAAKGTATVGAG----IGAAAMLPVPPAMPTELAAEITGVAAIELKLIAELHEVYGVR 183
Query: 348 TPSALAEGPASYEVVLSD--GTDVSDPEEEGHKQQAHQQHQ 464
P LA+ +Y SD G DVS P G +H + Q
Sbjct: 184 PPGGLAQRSTAYLNSWSDERGVDVSKPSTLGSAMNSHMKRQ 224
>pir||S58380 probable RNA-directed DNA polymerase (EC 2.7.7.49) - Crithidia
fasciculata retrotransposon CRE2
gi|624681|gb|AAB40036.1| putative reverse transcriptase;
contains putative reverse transcriptase domain and two
putative metal-binding domains
Length = 2517
Score = 38.1 bits (87), Expect = 0.055
Identities = 35/125 (28%), Positives = 44/125 (35%), Gaps = 16/125 (12%)
Frame = +1
Query: 61 WARQPCCCSAVHSETGERLEKAQTRVQAALRYRKPTLKLSQ*SRAPKP--PARRQPVV-L 231
W R+ +A + R+ Q R R P ++ S AP R PV L
Sbjct: 177 WQREATAQAATTTGAANRVSTPQQRTPTTSRSATPQPNIASPSGAPPRYNATRLSPVTPL 236
Query: 232 ATPVPRRTHRCPLLAARHAHPLA-------------QPKPRLSCTRSLSCVPHRVPLRRD 372
PVP R R A R P+ Q P L R+ + PHR P
Sbjct: 237 LVPVPPRDGRTYAQATRSTTPILYNAQHGTTTSATRQATPSLWAARASTATPHRAPSPTV 296
Query: 373 LLPTR 387
LPTR
Sbjct: 297 RLPTR 301
>gb|AAF07180.1|AF192769_1 serum opacity factor precursor [Streptococcus pyogenes]
Length = 201
Score = 38.1 bits (87), Expect = 0.055
Identities = 32/101 (31%), Positives = 46/101 (44%)
Frame = -3
Query: 430 SSSGSETSVPSLSTTS*EAGPSARALGVAHSSTTLCSLSGALAERADARASRRGGGTGAF 251
++S +ETS S ++ S G S A A S GA E +DA + G G+
Sbjct: 14 TTSSTETSASSAASVSAGTGTSGTAAREAGS--------GASGESSDASVASSEGSQGS- 64
Query: 250 DAAPAWPTPPAVVVRVVLAPLTTVTALMWASDTEEPLALAS 128
++APA P P A V A T + ASD + P A ++
Sbjct: 65 ESAPASPQPQAQTATVASASTTASPSSSSASDGKAPQAAST 105
>gb|AAG39439.1|AF296187_1 Sof precursor [Streptococcus pyogenes]
Length = 421
Score = 38.1 bits (87), Expect = 0.055
Identities = 32/101 (31%), Positives = 46/101 (44%)
Frame = -3
Query: 430 SSSGSETSVPSLSTTS*EAGPSARALGVAHSSTTLCSLSGALAERADARASRRGGGTGAF 251
++S +ETS S ++ S G S A A S GA E +DA + G G+
Sbjct: 14 TTSSTETSASSAASVSAGTGTSGTAAREAGS--------GASGESSDASVASSEGSQGS- 64
Query: 250 DAAPAWPTPPAVVVRVVLAPLTTVTALMWASDTEEPLALAS 128
++APA P P A V A T + ASD + P A ++
Sbjct: 65 ESAPASPQPQAQTATVASASTTASPSSSSASDGKAPQAAST 105
