KCC002701A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002701A_C01 KCC002701A_c01
ccaaAGTTCTGCTAACAGTGCCTGATAGAAATTGCAACATTTCGATCGCTGGACTGTCAA
CCAGAGCGCGGAGGGCCTAGTCGCCCCCGCCTGCTACCGAACGAAAACGTATCTTCTAAG
CTTTTGACACACCATCGCCTTTCGCGGGCTTTGTCCCGTTGCGATGGCGCCAGGTCGCTT
GTTCGGGCTTCTCGTCGCGGTGGCGCTAGCCCTGCAGGCCTATGCGCAGCTTCCGGTTGT
TGTTAGCCACTCTATTGAGGTAAACATCACGGTCCCGCCGTTCAAGGTGGACCAGGACGA
CGCCTACATTTGCGTATCGGCGCTGCTGCCGCCCCACCCGCATAAGCTAGTTGGCATCAT
TCCTCACGCTAAGCAAGAGGTGGTGCACCACATCCTGCTCTATGGTTGCACCGAGCCGCA
CATGGCTTCCAAGGACGGGAAGCCAGTGGCGTGGCGCTGCGACATGAAGCCCGTGTGCAA
CGGCCCCTCAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002701A_C01 KCC002701A_c01
         (491 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAG44251.1| peptidylglycine alpha-amidating monooxygenase [Ca...    52  5e-06
gb|AAG44250.1| peptidylglycine alpha-amidating monooxygenase [Ca...    52  5e-06
gb|AAK27303.1| peptidylglycine alpha-hydroxylating monooxygenase...    47  1e-04
gb|AAC47825.1| peptidylglycine alpha-hydroxylating monooxygenase...    47  2e-04
pir||JC5800 peptidylglycine monooxygenase (EC 1.14.17.3) - sea a...    47  2e-04

>gb|AAG44251.1| peptidylglycine alpha-amidating monooxygenase [Calliactis
           parasitica]
          Length = 984

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 24/73 (32%), Positives = 36/73 (48%)
 Frame = +2

Query: 266 ITVPPFKVDQDDAYICVSALLPPHPHKLVGIIPHAKQEVVHHILLYGCTEPHMASKDGKP 445
           I +P  K  ++DAY+C +  LP     +V   P +  ++ HH+LL+GC +P       K 
Sbjct: 32  IRMPGAKPLKNDAYLCTAVKLPSRSQYIVRFEPKSDPKIAHHMLLFGCNQP-----GSKE 86

Query: 446 VAWRCDMKPVCNG 484
             W C     CNG
Sbjct: 87  SIWDCGSSSECNG 99

>gb|AAG44250.1| peptidylglycine alpha-amidating monooxygenase [Calliactis
           parasitica]
          Length = 984

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 24/73 (32%), Positives = 36/73 (48%)
 Frame = +2

Query: 266 ITVPPFKVDQDDAYICVSALLPPHPHKLVGIIPHAKQEVVHHILLYGCTEPHMASKDGKP 445
           I +P  K  ++DAY+C +  LP     +V   P +  ++ HH+LL+GC +P       K 
Sbjct: 32  IRMPGAKPLKNDAYLCTAVKLPSRSQYIVRFEPKSDPKIAHHMLLFGCNQP-----GSKE 86

Query: 446 VAWRCDMKPVCNG 484
             W C     CNG
Sbjct: 87  SIWDCGSSSECNG 99

>gb|AAK27303.1| peptidylglycine alpha-hydroxylating monooxygenase [Calliactis
           parasitica]
          Length = 366

 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 22/67 (32%), Positives = 32/67 (46%)
 Frame = +2

Query: 260 VNITVPPFKVDQDDAYICVSALLPPHPHKLVGIIPHAKQEVVHHILLYGCTEPHMASKDG 439
           +NI +P  +  + D+Y C S  +      +VG  PHA+    HH+LL+GC  P    K  
Sbjct: 52  LNIAMPEVRPTKHDSYFCTSLKIDNPQTYIVGYQPHAEMHTAHHMLLFGCEYPPSQDK-- 109

Query: 440 KPVAWRC 460
               W C
Sbjct: 110 ---FWNC 113

>gb|AAC47825.1| peptidylglycine alpha-hydroxylating monooxygenase; CP1 [Calliactis
           parasitica]
          Length = 364

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 22/67 (32%), Positives = 31/67 (45%)
 Frame = +2

Query: 260 VNITVPPFKVDQDDAYICVSALLPPHPHKLVGIIPHAKQEVVHHILLYGCTEPHMASKDG 439
           +NI +P  +  + D Y C S  +      +VG  PHA+    HH+LL+GC  P    K  
Sbjct: 52  LNIAMPEVRPTKHDTYFCTSLKIDNPQTYIVGYQPHAEMHTAHHMLLFGCEYPPSQDK-- 109

Query: 440 KPVAWRC 460
               W C
Sbjct: 110 ---FWNC 113

>pir||JC5800 peptidylglycine monooxygenase (EC 1.14.17.3) - sea anemone
           (Calliactis parasitica)
          Length = 364

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 22/67 (32%), Positives = 31/67 (45%)
 Frame = +2

Query: 260 VNITVPPFKVDQDDAYICVSALLPPHPHKLVGIIPHAKQEVVHHILLYGCTEPHMASKDG 439
           +NI +P  +  + D Y C S  +      +VG  PHA+    HH+LL+GC  P    K  
Sbjct: 52  LNIAMPEVRPTKHDTYFCTSLKIDNPQTYIVGYQPHAEMHTAHHMLLFGCEYPPSQDK-- 109

Query: 440 KPVAWRC 460
               W C
Sbjct: 110 ---FWNC 113



EST assemble image


clone accession position
1 LCL006a05_r AV626294 1 215
2 MXL058f05_r BP096431 5 463
3 HCL092g03_r AV644713 20 458
4 HCL100a06_r AV645235 43 491




Chlamydomonas reinhardtii
Kazusa DNA Research Institute