Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002699A_C01 KCC002699A_c01
(255 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567886.1| 60S ribosomal protein L39 (RPL39C) [Arabidopsis... 97 7e-20
sp|P51425|RL39_MAIZE 60S RIBOSOMAL PROTEIN L39 gi|7440765|pir||T... 96 1e-19
gb|AAK60140.1|AF365406_2 ribosomal protein L39 [Candida albicans] 92 2e-18
ref|NP_566167.1| 60S ribosomal protein L39 (RPL39B) [Arabidopsis... 92 2e-18
sp|P51426|RL39_ORYSA 60S ribosomal protein L39 92 3e-18
>ref|NP_567886.1| 60S ribosomal protein L39 (RPL39C) [Arabidopsis thaliana]
gi|21431843|sp|P51424|RL39_ARATH 60S ribosomal protein
L39 gi|13926317|gb|AAK49624.1|AF372908_1
F13D4.162/F13D4.162 [Arabidopsis thaliana]
gi|16323252|gb|AAL15360.1| AT4g31981/F13D4.162
[Arabidopsis thaliana] gi|26451513|dbj|BAC42854.1|
unknown protein [Arabidopsis thaliana]
gi|34365573|gb|AAQ65098.1| At2g25210 [Arabidopsis
thaliana]
Length = 51
Score = 97.1 bits (240), Expect = 7e-20
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = +2
Query: 20 MPSNKSFKIKQKLAKKAKQNRPIPHWIRFRTDNTIRYNAKRRHWRRTKLG 169
MPS+KSF IK+KL KK +QNRPIPHWIR RTDNTIRYNAKRRHWRRTKLG
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLG 50
>sp|P51425|RL39_MAIZE 60S RIBOSOMAL PROTEIN L39 gi|7440765|pir||T03943 ribosomal protein
L39 - maize gi|1177369|emb|CAA64728.1| ribosomal protein
L39 [Zea mays]
Length = 51
Score = 96.3 bits (238), Expect = 1e-19
Identities = 42/50 (84%), Positives = 48/50 (96%)
Frame = +2
Query: 20 MPSNKSFKIKQKLAKKAKQNRPIPHWIRFRTDNTIRYNAKRRHWRRTKLG 169
MPS+K+F+IK+KLAKK +QNRPIP+WIR RTDNTIRYNAKRRHWRRTKLG
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>gb|AAK60140.1|AF365406_2 ribosomal protein L39 [Candida albicans]
Length = 51
Score = 92.4 bits (228), Expect = 2e-18
Identities = 41/51 (80%), Positives = 44/51 (85%)
Frame = +2
Query: 20 MPSNKSFKIKQKLAKKAKQNRPIPHWIRFRTDNTIRYNAKRRHWRRTKLGL 172
MPS KSF+ KQKLAK KQNRP+P WIR RTDN IRYNAKRRHWRRTKLG+
Sbjct: 1 MPSQKSFRTKQKLAKAQKQNRPLPQWIRLRTDNKIRYNAKRRHWRRTKLGI 51
>ref|NP_566167.1| 60S ribosomal protein L39 (RPL39B) [Arabidopsis thaliana]
gi|21618028|gb|AAM67078.1| putative ribosomal protein
L39 [Arabidopsis thaliana] gi|26452513|dbj|BAC43341.1|
putative ribosomal protein L39 [Arabidopsis thaliana]
gi|28827238|gb|AAO50463.1| putative ribosomal protein
L39 [Arabidopsis thaliana]
Length = 51
Score = 92.0 bits (227), Expect = 2e-18
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 20 MPSNKSFKIKQKLAKKAKQNRPIPHWIRFRTDNTIRYNAKRRHWRRTKLG 169
MPS+KSF IK+KL KK +QNRPIP+WIR RTDN IRYNAKRRHWRRTKLG
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLG 50
>sp|P51426|RL39_ORYSA 60S ribosomal protein L39
Length = 51
Score = 91.7 bits (226), Expect = 3e-18
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = +2
Query: 20 MPSNKSFKIKQKLAKKAKQNRPIPHWIRFRTDNTIRYNAKRRHWRRTKLG 169
MPS+K+F+IK+KLAKK +QNRPIP+WIR RTDNTIRYNAK HWRRTKLG
Sbjct: 1 MPSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKHXHWRRTKLG 50
