KCC002675A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC002675A_C01 KCC002675A_c01
TGACCTGAGTACCTGCCGCAAGGCCTACGATGTGGTGCGCGACGTCATCCTCAACCACCC
CGCGCTCGACAAGCCCGAGATCGGCTGGGACTGATCCCGCCTTTGCCGTGTTCATGGGCT
TTGAGCACGAGCGCATCCACATCGAGACCAGCTCTGTGCTCATCCGCGAGCTGCCGCTGA
CGAGCGTGCGCAAGCCGGAGTTCTGGCCCGACTACCACCCCACCAGCCACAACAGCTCGG
CGCCGGTGCCGACGCAGGGCGTGGACTTCCCCGTTAACAACCTGGTGCCGGTAGCTGGCG
AGAAGGTGGTGCTGGGCAAGGACATTGCCTACCCCTCGTTCGGGTGGGACAACGAGTACG
GCGCCAAGGAGGTCAACGTGCAGAGCTTCAAGGCCACGCAGTTCAAGGTGACCAACGGCG
AGTTCCTCAAGTTTGTCAAGTCGAGCGGCTACAGCAACCCCA
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002675A_C01 KCC002675A_c01
(462 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_719986.1| conserved domain protein [Shewanella oneidensis... 110 1e-23
ref|ZP_00074495.1| COG1262: Uncharacterized conserved protein [T... 103 9e-22
ref|ZP_00106146.1| COG1262: Uncharacterized conserved protein [N... 100 6e-21
ref|NP_842396.1| Generic methyltransferase [Nitrosomonas europae... 99 2e-20
ref|ZP_00033420.1| COG1262: Uncharacterized conserved protein [B... 64 1e-09
>ref|NP_719986.1| conserved domain protein [Shewanella oneidensis MR-1]
gi|24350928|gb|AAN57430.1|AE015878_12 conserved domain
protein [Shewanella oneidensis MR-1]
Length = 699
Score = 110 bits (274), Expect = 1e-23
Identities = 54/122 (44%), Positives = 75/122 (61%)
Frame = +3
Query: 96 PAFAVFMGFEHERIHIETSSVLIRELPLTSVRKPEFWPDYHPTSHNSSAPVPTQGVDFPV 275
PA+ + MG EHERIH+ETSSV+IR+LPL V + WP+ H +
Sbjct: 143 PAWVILMGIEHERIHLETSSVIIRQLPLEEVSQSTHWPECQ--DHGA----------IDA 190
Query: 276 NNLVPVAGEKVVLGKDIAYPSFGWDNEYGAKEVNVQSFKATQFKVTNGEFLKFVKSSGYS 455
N L+ VAG+K+ LGK ++GWDNEYG K V FKA+++ V+N E+L FV++ GY
Sbjct: 191 NQLIAVAGKKITLGKKEQDETYGWDNEYGNKSFKVADFKASKYLVSNQEYLSFVEAGGYQ 250
Query: 456 NP 461
+P
Sbjct: 251 SP 252
>ref|ZP_00074495.1| COG1262: Uncharacterized conserved protein [Trichodesmium
erythraeum IMS101]
Length = 449
Score = 103 bits (257), Expect = 9e-22
Identities = 53/121 (43%), Positives = 74/121 (60%)
Frame = +3
Query: 96 PAFAVFMGFEHERIHIETSSVLIRELPLTSVRKPEFWPDYHPTSHNSSAPVPTQGVDFPV 275
P +A+ MG EH+RIHIETSS+L R+LP +R+P W Y PT+ +
Sbjct: 149 PLWALMMGIEHQRIHIETSSMLFRQLPTEKLRRPSNW-QYAPTNG-----------EVVE 196
Query: 276 NNLVPVAGEKVVLGKDIAYPSFGWDNEYGAKEVNVQSFKATQFKVTNGEFLKFVKSSGYS 455
N ++ V+G V LGK P++GWD EYG ++V V F A+++ +TN EFL+FVK GY
Sbjct: 197 NEMIEVSGGVVKLGKPEDDPTYGWDIEYGDRQVKVAPFVASKYLITNAEFLEFVKGGGYE 256
Query: 456 N 458
N
Sbjct: 257 N 257
>ref|ZP_00106146.1| COG1262: Uncharacterized conserved protein [Nostoc punctiforme]
Length = 445
Score = 100 bits (250), Expect = 6e-21
Identities = 51/123 (41%), Positives = 76/123 (61%)
Frame = +3
Query: 90 TDPAFAVFMGFEHERIHIETSSVLIRELPLTSVRKPEFWPDYHPTSHNSSAPVPTQGVDF 269
T P +A+ MG EH+RIHIETSS+LIR+LP+ V++P+ W Y P + ++
Sbjct: 142 THPLWALMMGIEHQRIHIETSSMLIRQLPIERVKRPQNW-QYAPFNGYTAQ--------- 191
Query: 270 PVNNLVPVAGEKVVLGKDIAYPSFGWDNEYGAKEVNVQSFKATQFKVTNGEFLKFVKSSG 449
N ++ V G V LGK P++GWD +YG + V V+ F A+++ +TN +F FVK+ G
Sbjct: 192 --NEMIQVIGGVVKLGKAFNDPTYGWDIDYGDRTVEVEPFLASKYLITNADFSYFVKAGG 249
Query: 450 YSN 458
Y N
Sbjct: 250 YEN 252
>ref|NP_842396.1| Generic methyltransferase [Nitrosomonas europaea ATCC 19718]
gi|30181121|emb|CAD86313.1| Generic methyltransferase
[Nitrosomonas europaea ATCC 19718]
Length = 705
Score = 99.4 bits (246), Expect = 2e-20
Identities = 54/119 (45%), Positives = 74/119 (61%)
Frame = +3
Query: 96 PAFAVFMGFEHERIHIETSSVLIRELPLTSVRKPEFWPDYHPTSHNSSAPVPTQGVDFPV 275
P +A+ MG EHERIH+ETSSVLIR+ L V+ W P ++ +AP
Sbjct: 148 PWWAIVMGVEHERIHLETSSVLIRQHKLKYVQSHPAW---QPCRNSGNAPE--------- 195
Query: 276 NNLVPVAGEKVVLGKDIAYPSFGWDNEYGAKEVNVQSFKATQFKVTNGEFLKFVKSSGY 452
N ++ V KVVLGKD A P +GWDNEYG E + +F+A+++ V+N EFL FV++ GY
Sbjct: 196 NEMILVPAGKVVLGKDKADPVYGWDNEYGHHEAELSAFQASRYLVSNQEFLGFVEARGY 254
>ref|ZP_00033420.1| COG1262: Uncharacterized conserved protein [Burkholderia fungorum]
Length = 447
Score = 63.5 bits (153), Expect = 1e-09
Identities = 37/120 (30%), Positives = 59/120 (48%), Gaps = 4/120 (3%)
Frame = +3
Query: 114 MGFEHERIHIETSSVLIRELPL----TSVRKPEFWPDYHPTSHNSSAPVPTQGVDFPVNN 281
+ EH +H ET + ++ +LPL T +R+P V G +++
Sbjct: 143 VAIEHRLMHAETLAYMLHQLPLAEKVTELREPV---------------VTRAGPRDALSS 187
Query: 282 LVPVAGEKVVLGKDIAYPSFGWDNEYGAKEVNVQSFKATQFKVTNGEFLKFVKSSGYSNP 461
+V V VLG FGWDNE+G V+V +F+ ++ VTNG F +F+++ GY P
Sbjct: 188 MVSVPAGTAVLGMSRDAGRFGWDNEFGEMHVDVPAFEIDRYMVTNGVFREFIEAGGYREP 247
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
LCL053d03_r |
AV629161 |
1 |
502 |
2 |
HCL084g01_r |
AV644248 |
41 |
213 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute