Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002673A_C01 KCC002673A_c01
(499 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB80719.1| precollagen P [Mytilus edulis] 35 0.39
ref|XP_340619.1| hypothetical protein Tb927.2.5200 [Trypanosoma ... 35 0.51
ref|NP_476764.1| transformer 2 CG10128-PA [Drosophila melanogast... 35 0.66
ref|NP_476763.1| transformer 2 CG10128-PB [Drosophila melanogast... 35 0.66
pir||A32373 transformer-2 protein - fruit fly (Drosophila melano... 35 0.66
>gb|AAB80719.1| precollagen P [Mytilus edulis]
Length = 902
Score = 35.4 bits (80), Expect = 0.39
Identities = 31/97 (31%), Positives = 40/97 (40%)
Frame = +3
Query: 159 RAGQGFRGAAGPSAPAGPTDLRNLISPSSYTYERLSDVGSPEETPYRRNFPNTGFGDAAG 338
R GQG +GA GPS PAGP PS ER + G+P + PN G+
Sbjct: 551 RGGQGPQGAEGPSGPAGPRGPAGSQGPSG---ER-GEPGAP-----GKKGPNGDRGNQGS 601
Query: 339 SDSDDADGFYPNRGRQAPMTWLDRLKNLGQRAPPPVQ 449
+ +G NRG + R + G R P Q
Sbjct: 602 PGAPGKNGARGNRGSRGSNGSPGRSGSPGSRGKPGPQ 638
>ref|XP_340619.1| hypothetical protein Tb927.2.5200 [Trypanosoma brucei]
gi|33348654|gb|AAQ15978.1| hypothetical protein
Tb927.2.5200 [Trypanosoma brucei]
Length = 675
Score = 35.0 bits (79), Expect = 0.51
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Frame = +3
Query: 147 MAQARAGQGFRGAAGPSAPAGPTDLRNLISPSSYTYER-----LSDVGSPEETPYRRNFP 311
+A+ + +G A + GPTD + LISP R S SPE TP R +
Sbjct: 504 LARKGSPRGVPSRATSGSRVGPTDQQKLISPVGSPRSRRPIFSSSSGSSPEATPPRASIK 563
Query: 312 NTGF-GDAAGSDSDDADGFYPNRGRQA---PMTWLDRLKNLGQRAPPP 443
TG G A G S G N+ A P T+ +++ PPP
Sbjct: 564 QTGCRGAALGVSSTAQVGGGNNQSTTAKPLPTTFQSVERSVPASPPPP 611
>ref|NP_476764.1| transformer 2 CG10128-PA [Drosophila melanogaster]
gi|136128|sp|P19018|TRA2_DROME Transformer-2
sex-determining protein gi|85159|pir||A31638
transformer-2 sex-determining protein, form A - fruit
fly (Drosophila melanogaster) gi|8717|emb|CAA40722.1|
tra-2 [Drosophila melanogaster] gi|158647|gb|AAA28953.1|
transformer-2 protein gi|158649|gb|AAA28954.1|
transformer-2 protein A gi|16186095|gb|AAL13997.1|
SD04329p [Drosophila melanogaster]
gi|21627194|gb|AAF58232.2| CG10128-PA [Drosophila
melanogaster]
Length = 264
Score = 34.7 bits (78), Expect = 0.66
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -2
Query: 453 CSAREGARAAPGSSAGPTTSSAPAARG*DRSRL--RRRSRSPLHRQSRCWENSVGMASPP 280
CSAR + + SS+ TTSS R D RR RS R+SR +S SPP
Sbjct: 13 CSARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSS---ESPP 69
Query: 279 ESPRH 265
PRH
Sbjct: 70 PEPRH 74
>ref|NP_476763.1| transformer 2 CG10128-PB [Drosophila melanogaster]
gi|103427|pir||D35846 transformer-2 sex-determining
protein, form D - fruit fly (Drosophila melanogaster)
gi|158652|gb|AAA28957.1| transformer-2 protein D
gi|158654|gb|AAA69686.1| transformer-2 protein D
gi|21627198|gb|AAM68560.1| CG10128-PB [Drosophila
melanogaster]
Length = 136
Score = 34.7 bits (78), Expect = 0.66
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -2
Query: 453 CSAREGARAAPGSSAGPTTSSAPAARG*DRSRL--RRRSRSPLHRQSRCWENSVGMASPP 280
CSAR + + SS+ TTSS R D RR RS R+SR +S SPP
Sbjct: 13 CSARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSS---ESPP 69
Query: 279 ESPRH 265
PRH
Sbjct: 70 PEPRH 74
>pir||A32373 transformer-2 protein - fruit fly (Drosophila melanogaster)
(fragment) gi|695327|gb|AAA62771.1| transformer-2
Length = 256
Score = 34.7 bits (78), Expect = 0.66
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -2
Query: 453 CSAREGARAAPGSSAGPTTSSAPAARG*DRSRL--RRRSRSPLHRQSRCWENSVGMASPP 280
CSAR + + SS+ TTSS R D RR RS R+SR +S SPP
Sbjct: 5 CSARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSS---ESPP 61
Query: 279 ESPRH 265
PRH
Sbjct: 62 PEPRH 66
