Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002665A_C01 KCC002665A_c01
(446 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00116798.1| COG0823: Periplasmic component of the Tol bio... 32 2.0
ref|NP_385951.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] g... 32 2.0
pir||T30855 multidrug resistance protein 2 - fluke (Schistosoma ... 31 3.4
ref|NP_103051.1| hypothetical protein [Mesorhizobium loti] gi|14... 31 4.4
ref|XP_291653.2| similar to proline-rich glycoprotein (sgp158) [... 31 4.4
>ref|ZP_00116798.1| COG0823: Periplasmic component of the Tol biopolymer transport
system [Cytophaga hutchinsonii]
Length = 304
Score = 32.0 bits (71), Expect = 2.0
Identities = 17/52 (32%), Positives = 24/52 (45%)
Frame = -2
Query: 394 FTSYQRGPHTSRVETFTALAAVPTWCAPGTFIYFTRPKVVGMYIWRTEPCGT 239
+T G R+ L P + A GT+IYF + M IWR +P G+
Sbjct: 165 YTIPANGGTEQRLTDAAGLDDGPDYTADGTYIYFNSVRTGKMKIWRMKPDGS 216
>ref|NP_385951.1| HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
gi|15074779|emb|CAC46424.1| HYPOTHETICAL PROTEIN
[Sinorhizobium meliloti]
Length = 275
Score = 32.0 bits (71), Expect = 2.0
Identities = 13/29 (44%), Positives = 15/29 (50%)
Frame = -2
Query: 328 PTWCAPGTFIYFTRPKVVGMYIWRTEPCG 242
P W A G +IYF + M IWR P G
Sbjct: 158 PDWSADGEWIYFNSSRTGRMQIWRVRPDG 186
>pir||T30855 multidrug resistance protein 2 - fluke (Schistosoma mansoni)
gi|425476|gb|AAA66477.1| SMDR2
Length = 1254
Score = 31.2 bits (69), Expect = 3.4
Identities = 11/23 (47%), Positives = 19/23 (81%)
Frame = +1
Query: 169 HGRAIKKCARACNVASQVMSSVR 237
HG+ IK +RAC ++++V+SS+R
Sbjct: 212 HGKEIKAYSRACTISNEVLSSIR 234
>ref|NP_103051.1| hypothetical protein [Mesorhizobium loti]
gi|14022227|dbj|BAB48837.1| hypothetical protein
[Mesorhizobium loti]
Length = 183
Score = 30.8 bits (68), Expect = 4.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 270 MPTTFGLVK*MKVPGAHHVGTAASAVKVSTREVCGPRWYDV 392
+P T G ++ +P A HV TAA + + R P W D+
Sbjct: 89 VPETLGYLRLSGLPVADHVSTAAKRFRYNPRVFIAPPWPDI 129
>ref|XP_291653.2| similar to proline-rich glycoprotein (sgp158) [Homo sapiens]
Length = 1318
Score = 30.8 bits (68), Expect = 4.4
Identities = 23/77 (29%), Positives = 36/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 192 RPCV*RCFTSHVLSPYVPHGSVRHMYMPTTFGLVK*MKVPGAHHVGTAASAVKVSTREVC 371
RPC R + + + P +P V + + G ++ + P H A A VSTR C
Sbjct: 259 RPCGIRVYQTPMWHPCLPDAHVASVSIRPPCG-IRVYQTPMWHPCLPDAHAASVSTRRPC 317
Query: 372 GPRWYD--VKNICVVDA 416
G R Y +++ C+ DA
Sbjct: 318 GIRVYQTPMRHPCLPDA 334
