KCC002664A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002664A_C01 KCC002664A_c01
tagacacagctgccgtttcggGCGGTTAGCGCAACGTCTGTAAGGAATGGCTTCTCCTTC
CACCTTGCCATTAGCGGCAGAAGAGCTCAAAGCCGAAGGCAACAAGTACTTTGGTTCCGG
AGACTTTGTGAACGCTGCTGATGCTTACAAACGAGCCATCGGCGTCTGCCCCGAGAGCGC
TGTGCTGTGGTCAAACCTAGCTGCTGCACATGTGAACCTCAAGCAGTGGGGTGAGGCGCT
GCAGGCCGCTGGGGAGTGCCTCAAACTGGACCCGGGTTTCATCAAGGCGTACGGCAGGAA
AGCCGCTGCGCAGCTGGGTCTCATCAGGCCGGGCGATGCGGAGTGCACGCTGCGGGCCGG
CCTTGCGGTGGACCCGCACAACGGCTTCCTGCAGGAGGAGCTGGAGCGGCTGCGCAAGGA
GGACGACGGCGACCAGCGGCCAGTGCGCGGCATGAACGGCTCGGACCGGCCGCTGCGAGA
CATGCAGGGCAGGACTGGCCTGTCCATGGAAGGCAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002664A_C01 KCC002664A_c01
         (517 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_172691.1| stress inducible protein (sti), putative [Arabi...    86  4e-16
ref|NP_503322.1| stress-induced-phosphoprotein 1 like (37.0 kD) ...    80  2e-14
gb|EAA22670.1| stress-induced protein sti1-like protein [Plasmod...    79  3e-14
ref|NP_594266.1| hypothetical protein [Schizosaccharomyces pombe...    79  4e-14
gb|AAF19538.1|AC007190_6 F23N19.10 [Arabidopsis thaliana]              78  6e-14

>ref|NP_172691.1| stress inducible protein (sti), putative [Arabidopsis thaliana]
           gi|25402717|pir||H86257 protein F5O11.2 [imported] -
           Arabidopsis thaliana gi|8778620|gb|AAF79628.1|AC025416_2
           F5O11.2 [Arabidopsis thaliana]
           gi|17473522|gb|AAL38384.1| At1g12270/F5O11_1
           [Arabidopsis thaliana] gi|23308495|gb|AAN18217.1|
           At1g12270/F5O11_1 [Arabidopsis thaliana]
          Length = 572

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 50/109 (45%), Positives = 64/109 (57%)
 Frame = +2

Query: 77  AEELKAEGNKYFGSGDFVNAADAYKRAIGVCPESAVLWSNLAAAHVNLKQWGEALQAAGE 256
           AEE KA+GN  F SGDF  A + +  AI + P + VL+SN +AAH +L Q+ EAL  A E
Sbjct: 2   AEEAKAKGNAAFSSGDFTTAINHFTEAIALAPTNHVLFSNRSAAHASLHQYAEALSDAKE 61

Query: 257 CLKLDPGFIKAYGRKAAAQLGLIRPGDAECTLRAGLAVDPHNGFLQEEL 403
            +KL P + K Y R  AA LGL +   A    + GL VDP N  L+  L
Sbjct: 62  TIKLKPYWPKGYSRLGAAHLGLNQFELAVTAYKKGLDVDPTNEALKSGL 110

 Score = 68.6 bits (166), Expect = 5e-11
 Identities = 45/129 (34%), Positives = 64/129 (48%), Gaps = 4/129 (3%)
 Frame = +2

Query: 68  PLAAEELKAEGNKYFGSGDFVNAADAYKRAIGVCPESAVLWSNLAAAHVNLKQWGEALQA 247
           P   +E + +GN +F    +  A   Y  AI   P     +SN AA++  L    E L+ 
Sbjct: 380 PKLGDEEREKGNDFFKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAMPEGLKD 439

Query: 248 AGECLKLDPGFIKAYGRKAAAQLGLIRPGDAECTLRAGLAVDPHNGFLQEELER----LR 415
           A +C++LDP F K Y RKAA Q  L    +A  T +AGL  DP N  L + ++R    + 
Sbjct: 440 AEKCIELDPTFSKGYSRKAAVQFFLKEYDNAMETYQAGLEHDPSNQELLDGVKRCVQQIN 499

Query: 416 KEDDGDQRP 442
           K + GD  P
Sbjct: 500 KANRGDLTP 508

>ref|NP_503322.1| stress-induced-phosphoprotein 1 like (37.0 kD) (5B253)
           [Caenorhabditis elegans] gi|7506528|pir||T03899
           hypothetical protein R09E12.3 - Caenorhabditis elegans
           gi|10864459|gb|AAG24172.1| Hypothetical protein R09E12.3
           [Caenorhabditis elegans]
          Length = 320

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 47/147 (31%), Positives = 74/147 (49%)
 Frame = +2

Query: 68  PLAAEELKAEGNKYFGSGDFVNAADAYKRAIGVCPESAVLWSNLAAAHVNLKQWGEALQA 247
           P  A+E K +GN+YF  GD+  A   Y  A+   PE+A+L+SN AA    L ++  AL  
Sbjct: 137 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDD 196

Query: 248 AGECLKLDPGFIKAYGRKAAAQLGLIRPGDAECTLRAGLAVDPHNGFLQEELERLRKEDD 427
              C++LD  FIK Y RKAA  + +     A+      L VDP N   +E +    + +D
Sbjct: 197 CDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCLRSND 256

Query: 428 GDQRPVRGMNGSDRPLRDMQGRTGLSM 508
            D    +  + +D  ++++    G+ M
Sbjct: 257 EDPEKAKERSLADPEVQEILRDPGMRM 283

>gb|EAA22670.1| stress-induced protein sti1-like protein [Plasmodium yoelii yoelii]
          Length = 559

 Score = 79.0 bits (193), Expect = 3e-14
 Identities = 44/117 (37%), Positives = 72/117 (60%)
 Frame = +2

Query: 77  AEELKAEGNKYFGSGDFVNAADAYKRAIGVCPESAVLWSNLAAAHVNLKQWGEALQAAGE 256
           A+ LK  GNK F  G F ++   +  AI   P   VL+SNL+ A+ +L ++ EAL++A +
Sbjct: 7   AQRLKELGNKCFQEGKFEDSVKYFSDAIKNDPSDHVLYSNLSGAYSSLGRFYEALESANK 66

Query: 257 CLKLDPGFIKAYGRKAAAQLGLIRPGDAECTLRAGLAVDPHNGFLQEELERLRKEDD 427
           C+ +   + K Y RKA A+ GL +  ++E T   GL +DP+N  L++ LE++RK+ +
Sbjct: 67  CINIKNDWPKGYIRKACAEHGLRQLDNSEKTYLEGLKLDPNNKSLKDGLEKVRKDKE 123

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 41/105 (39%), Positives = 57/105 (54%)
 Frame = +2

Query: 68  PLAAEELKAEGNKYFGSGDFVNAADAYKRAIGVCPESAVLWSNLAAAHVNLKQWGEALQA 247
           P+ AEE K +GN++F + DF NA   Y  AI   P  A L+SN AAA   L ++  AL+ 
Sbjct: 370 PVKAEEHKNKGNEFFKNNDFPNAKKEYDEAIRRNPNDAKLYSNRAAALTKLIEYPSALED 429

Query: 248 AGECLKLDPGFIKAYGRKAAAQLGLIRPGDAECTLRAGLAVDPHN 382
             + ++LDP F+KAY RK      +     A      GL +DP+N
Sbjct: 430 VMKAIELDPKFVKAYSRKGNLHFFMKDYYKAIQAYNKGLELDPNN 474

>ref|NP_594266.1| hypothetical protein [Schizosaccharomyces pombe]
           gi|7490860|pir||T37851 hypothetical protein SPAC17G6.19c
           - fission yeast  (Schizosaccharomyces pombe)
           gi|2408032|emb|CAB16230.1| SPAC17G6.19c
           [Schizosaccharomyces pombe] gi|7211050|emb|CAB77009.1|
           SPAC1142.02c [Schizosaccharomyces pombe]
          Length = 317

 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 46/115 (40%), Positives = 63/115 (54%)
 Frame = +2

Query: 77  AEELKAEGNKYFGSGDFVNAADAYKRAIGVCPESAVLWSNLAAAHVNLKQWGEALQAAGE 256
           AE+LK EGN    + D+  A D Y +AI + P S V +SN AAA+  L Q+  A++ A  
Sbjct: 83  AEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALT 142

Query: 257 CLKLDPGFIKAYGRKAAAQLGLIRPGDAECTLRAGLAVDPHNGFLQEELERLRKE 421
           CL LDP   +A+GR   A+L L     A    + GL  DP+N  L+  LE   K+
Sbjct: 143 CLSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLDFDPNNEVLKRGLEAANKQ 197

 Score = 32.0 bits (71), Expect = 4.8
 Identities = 18/52 (34%), Positives = 25/52 (47%)
 Frame = +2

Query: 98  GNKYFGSGDFVNAADAYKRAIGVCPESAVLWSNLAAAHVNLKQWGEALQAAG 253
           G      GD   AADAYK+ +   P + VL   L AA+  L Q  ++   +G
Sbjct: 158 GRAKLSLGDAAAAADAYKKGLDFDPNNEVLKRGLEAANKQLNQPSDSSATSG 209

>gb|AAF19538.1|AC007190_6 F23N19.10 [Arabidopsis thaliana]
          Length = 594

 Score = 78.2 bits (191), Expect = 6e-14
 Identities = 45/109 (41%), Positives = 64/109 (58%)
 Frame = +2

Query: 77  AEELKAEGNKYFGSGDFVNAADAYKRAIGVCPESAVLWSNLAAAHVNLKQWGEALQAAGE 256
           A+E KA+GN  F SGDF +A + +  AI + P + VL+SN +AAH +L  + EAL  A +
Sbjct: 2   ADEAKAKGNAAFSSGDFNSAVNHFTDAINLTPTNHVLFSNRSAAHASLNHYDEALSDAKK 61

Query: 257 CLKLDPGFIKAYGRKAAAQLGLIRPGDAECTLRAGLAVDPHNGFLQEEL 403
            ++L P + K Y R  AA LGL +  +A      GL +DP N  L+  L
Sbjct: 62  TVELKPDWGKGYSRLGAAHLGLNQFDEAVEAYSKGLEIDPSNEGLKSGL 110

 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
 Frame = +2

Query: 68  PLAAEELKAEGNKYFGSGDFVNAADAYKRAIGVCPE-------------SAVLWS----- 193
           P   +E + +GN +F    + +A   Y  AI   P+             + VL       
Sbjct: 379 PNIGDEEREKGNDFFKEQKYPDAVRHYTEAIKRNPKDPRVRRIHHHISFNVVLKKSSVFD 438

Query: 194 -----NLAAAHVNLKQWGEALQAAGECLKLDPGFIKAYGRKAAAQLGLIRPGDAECTLRA 358
                N AA +  L    E L+ A +C++LDP F+K Y RK A Q  +    +A  T + 
Sbjct: 439 CFNNFNRAACYTKLGAMPEGLKDAEKCIELDPTFLKGYSRKGAVQFFMKEYDNAMETYQK 498

Query: 359 GLAVDPHNGFLQEELER----LRKEDDGDQRP 442
           GL  DP+N  L + ++R    + K + GD  P
Sbjct: 499 GLEHDPNNQELLDGVKRCVQQINKANRGDLTP 530



EST assemble image


clone accession position
1 HCL093c07_r AV644750 1 486
2 HCL081b04_r AV644067 22 517




Chlamydomonas reinhardtii
Kazusa DNA Research Institute